Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F73 I1 R1 29 73.0 2473040 99.2% 2453255 138.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,552,129 G→T R4S (CGC→AGC)  ypeA ← putative acetyltransferase YpeA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,552,1290GT100.0% 258.3 / NA 72R4S (CGC→AGC) ypeAputative acetyltransferase YpeA
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (33/39);  total (33/39)

CTCAGCGACCAAAAACAAACTGACGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCGTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCATAATGGGGAGTTGTCAACTATTGAAATG  >  NC_000913/2551992‑2552260
                                                                                                                                         |                                                                                                                                   
cTCAGCGACCAAAAACAAACTGACGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTa                                                                                                                                   >  2:1111265/1‑140 (MQ=255)
  cAGCGACCAAAAACAATCTGACGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTAtc                                                                                                                                 >  1:210126/1‑140 (MQ=255)
   aGCGACCAAAAACAAACTGACGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTAtct                                                                                                                                <  2:957394/140‑1 (MQ=255)
    gCGACCAAAAACAAACTGACGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCCCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTAtctc                                                                                                                               <  2:711827/140‑1 (MQ=255)
     cGACCAAAAACAAACTGACGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTcc                                                                                                                              >  2:89500/1‑140 (MQ=255)
     cGACC‑AAAACAAACTGACGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCa                                                                                                                             <  2:586489/140‑1 (MQ=255)
      gACCAAAAACGAACTGACGTCATGGTTTATCTTACGCCCGGTGTCCATTTTCGGATCGTTCCCCGGACGCCGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCCTCCTGGCGAAATACGCTTATCTCCa                                                                                                                             <  2:351986/140‑1 (MQ=255)
      gACCAAAAACAAACTGACGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCa                                                                                                                             <  2:728222/140‑1 (MQ=255)
       aCCAAAAACAAACTGACGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCAt                                                                                                                            <  1:89500/140‑1 (MQ=255)
         cAAAAACAAACTGACGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATgg                                                                                                                          <  2:816016/140‑1 (MQ=255)
          aaaaaCAAACTGACGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGt                                                                                                                         >  1:750940/1‑140 (MQ=255)
                      aCGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCACCGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCtt                                                                                                             >  2:1077162/1‑140 (MQ=255)
                       cGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCttt                                                                                                            >  2:833078/1‑140 (MQ=255)
                       cGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCttt                                                                                                            >  2:904164/1‑140 (MQ=255)
                            tGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCg                                                                                                       <  2:947525/140‑1 (MQ=255)
                            tGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCg                                                                                                       <  1:833078/140‑1 (MQ=255)
                            tGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCg                                                                                                       <  2:835210/140‑1 (MQ=255)
                            tGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCg                                                                                                       <  2:476047/140‑1 (MQ=255)
                                 cATCTTACGCTCGATGTCCA‑TTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTaa                                                                                                 >  1:413358/1‑140 (MQ=255)
                                  aTCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTaa                                                                                                 >  2:1207074/1‑140 (MQ=255)
                                   tCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTaaa                                                                                                <  1:1111265/140‑1 (MQ=255)
                                     ttACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAg                                                                                              <  2:686168/140‑1 (MQ=255)
                                        cGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCt                                                                                           >  2:273346/1‑140 (MQ=255)
                                            cGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGAtt                                                                                       <  1:402066/140‑1 (MQ=255)
                                             gATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTa                                                                                      >  2:1024653/1‑140 (MQ=255)
                                             gATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTa                                                                                      >  1:950654/1‑140 (MQ=255)
                                              aTGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTAt                                                                                     >  1:186749/1‑140 (MQ=255)
                                                 tCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGc                                                                                  <  1:388452/140‑1 (MQ=255)
                                                         cGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACgg                                                                          <  2:950654/140‑1 (MQ=255)
                                                              cGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGaa                                                                     >  2:1575/1‑140 (MQ=255)
                                                              cGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGaa                                                                     <  1:273346/140‑1 (MQ=255)
                                                              cGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGACGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGaa                                                                     <  1:334398/140‑1 (MQ=255)
                                                                ttCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTCTTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAAtt                                                                   >  2:707654/1‑140 (MQ=255)
                                                                ttCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGaa                                                                     <  1:69870/138‑1 (MQ=255)
                                                                ttCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGaa                                                                     >  2:69870/1‑138 (MQ=255)
                                                                ttCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAAtt                                                                   >  1:7716/1‑140 (MQ=255)
                                                                ttCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCCGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAAtt                                                                   >  1:1074537/1‑140 (MQ=255)
                                                                     cGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCa                                                              <  1:210060/140‑1 (MQ=255)
                                                                        aCGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAAt                                                                    >  2:86323/1‑131 (MQ=255)
                                                                        aCGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAAt                                                                    <  1:86323/131‑1 (MQ=255)
                                                                        aCGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAata                                                           >  1:1108468/1‑140 (MQ=255)
                                                                         cGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTTCCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAatat                                                          <  2:1051900/140‑1 (MQ=255)
                                                                         cGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAatat                                                          <  1:358216/140‑1 (MQ=255)
                                                                            agcaAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTg                                                       >  1:101076/1‑140 (MQ=255)
                                                                            agcaAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTg                                                       >  1:565423/1‑140 (MQ=255)
                                                                                   cGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGaaaa                                                >  1:92124/1‑140 (MQ=255)
                                                                                     cAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATc                                              <  2:565423/140‑1 (MQ=255)
                                                                                              cAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGaaaa                                     <  1:904164/140‑1 (MQ=255)
                                                                                                aaGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAg                                   <  1:625305/140‑1 (MQ=255)
                                                                                                aaGGGTGATGACCTCTTCGAAATCTTCCCGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAg                                   <  2:1074537/140‑1 (MQ=255)
                                                                                                  gggTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTg                                 <  1:1077162/140‑1 (MQ=255)
                                                                                                    gTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGc                               <  1:538719/140‑1 (MQ=255)
                                                                                                     tgatgaCCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCa                              >  1:638011/1‑140 (MQ=255)
                                                                                                     tgatgaCCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCa                              <  1:263901/140‑1 (MQ=255)
                                                                                                     tgatgaCCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGGCGAATTACCCAATATTTTACTAAAAACGGTTGAAAAAGTGGCa                              >  2:625305/1‑140 (MQ=255)
                                                                                                     tgatgaCCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCCGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCa                              >  1:560241/1‑140 (MQ=255)
                                                                                                       atgaCCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGTGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCATa                            >  1:119393/1‑140 (MQ=255)
                                                                                                       atgaCCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGc                               <  1:1082842/137‑1 (MQ=255)
                                                                                                       atgaCCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGc                               >  2:1082842/1‑137 (MQ=255)
                                                                                                       atgaCCTCTTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCATa                            >  1:1019292/1‑140 (MQ=255)
                                                                                                            ctctTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCATAATggg                       <  1:707654/140‑1 (MQ=255)
                                                                                                             tctTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCa                              >  1:1011579/1‑132 (MQ=255)
                                                                                                             tctTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCa                              <  2:1011579/132‑1 (MQ=255)
                                                                                                              ctTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCATAATGGGGa                     >  2:607893/1‑140 (MQ=255)
                                                                                                              ctTCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCATAATGGGGa                     >  2:969525/1‑140 (MQ=255)
                                                                                                               ttCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCa                              <  2:293228/130‑1 (MQ=255)
                                                                                                               ttCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCa                              >  1:293228/1‑130 (MQ=255)
                                                                                                               ttCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCATAATGGGGAg                    <  2:917047/140‑1 (MQ=255)
                                                                                                               ttCGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCATAATGGGGAg                    >  1:917047/1‑140 (MQ=255)
                                                                                                                 cGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCATAATGGGGAGtt                  <  2:210126/140‑1 (MQ=255)
                                                                                                                 cGAAATCTTCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCATAATGGGGAGtt                  <  1:1207074/140‑1 (MQ=255)
                                                                                                                         tCCTGGCGAAATACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCATAATGGGGAGTTGTCAACTa          <  2:7716/140‑1 (MQ=255)
                                                                                                                                 aaaTACGCTTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCATAATGGGGAGTTGTCAACTATtgaaatg  <  2:101076/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                   
CTCAGCGACCAAAAACAAACTGACGTCATGGTTCATCTTACGCTCGATGTCCATTTCCGGATCGTTCCACGGACGCAGCAAGTCGCAACGCTCCCAAAGGGTGATGACCTCTTCGAAATCTTCCTGGCGAAATACGCGTATCTCCATGGTATTCGTTACCTTTTTGCGGGTTAAAAGGCTGATTATGGCGTGAACGGTCGAATTAGCCAATATCTGACGAAAATCGGTTGAAAAAGTGGCATAATGGGGAGTTGTCAACTATTGAAATG  >  NC_000913/2551992‑2552260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A