Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F73 I1 R1
|
27 |
139.9 |
4778260 |
99.2% |
4740033 |
138.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,337,239 |
G→T |
S6R (AGC→AGA) |
mlaB ← |
intermembrane phospholipid transport system protein MlaB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,337,239 | 0 | G | T | 100.0%
| 542.8
/ NA
| 152 | S6R (AGC→AGA) | mlaB | intermembrane phospholipid transport system protein MlaB |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (78/74); total (78/74) |
Only 100 of 157 total aligned reads displayed.
TATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCAGCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCA > NC_000913/3337103‑3337374
|
tCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAg > 2:1744837/1‑140 (MQ=255)
cACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTg < 1:542823/140‑1 (MQ=255)
cgcgGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGAc < 2:2059303/140‑1 (MQ=255)
gcgGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAACTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACt > 2:496836/1‑140 (MQ=255)
agaCACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTc > 2:1476289/1‑140 (MQ=255)
agaCACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTc > 1:609567/1‑140 (MQ=255)
acacGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCat < 2:1925423/140‑1 (MQ=255)
gCTAAGATCGATGCAGGCAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTAttt > 2:292653/1‑140 (MQ=255)
aaGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTAtttttt < 1:969448/140‑1 (MQ=255)
aTGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTcc > 2:2123744/1‑140 (MQ=255)
aTGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTcc > 2:108421/1‑140 (MQ=255)
tGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCa < 1:1744837/140‑1 (MQ=255)
cAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCaga < 1:571523/140‑1 (MQ=255)
ggTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGt > 1:1438460/1‑140 (MQ=255)
ggTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGt > 1:671956/1‑140 (MQ=255)
gTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTAtttttt < 2:1356498/127‑1 (MQ=255)
gTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTg > 2:1661490/1‑140 (MQ=255)
gTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTg < 1:387904/140‑1 (MQ=255)
aTCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGAtt > 2:1485780/1‑140 (MQ=255)
ccccTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGAtttt > 1:1408686/1‑140 (MQ=255)
ccccTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGAtttt > 1:2185821/1‑140 (MQ=255)
cccTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTc > 2:1790966/1‑140 (MQ=255)
cTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGACAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTg < 2:1990393/140‑1 (MQ=255)
tCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGtt > 2:890209/1‑140 (MQ=255)
tCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGtt > 2:2342250/1‑140 (MQ=255)
tCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGtt > 2:367349/1‑140 (MQ=255)
tCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCT‑ATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTg > 2:549849/1‑140 (MQ=255)
ccGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTgag < 1:1790966/140‑1 (MQ=255)
cTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGaaa > 2:1536812/1‑140 (MQ=255)
cTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGaaa > 1:74965/1‑140 (MQ=255)
cTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGaaa > 2:1293841/1‑140 (MQ=255)
cTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGaaa > 1:658864/1‑140 (MQ=255)
tCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATc > 1:2041462/1‑140 (MQ=255)
ttCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGAt < 1:2083613/132‑1 (MQ=255)
cccAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTgcg < 2:1408686/140‑1 (MQ=255)
aaGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGt > 1:2127689/1‑140 (MQ=255)
aaGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGt > 2:1129677/1‑140 (MQ=255)
aaGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGt > 1:771167/1‑140 (MQ=255)
aaGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGt > 1:1950208/1‑140 (MQ=255)
gCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCa > 2:1569063/1‑140 (MQ=255)
cGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAg < 2:698616/140‑1 (MQ=255)
ggTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAgg < 1:525432/140‑1 (MQ=255)
ggTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAgg < 2:2209203/140‑1 (MQ=255)
tAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGcc > 1:491487/1‑140 (MQ=255)
gCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGt > 1:1666581/1‑140 (MQ=255)
cAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTc < 2:816247/140‑1 (MQ=255)
cAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTc < 2:944709/140‑1 (MQ=255)
aaaCGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGa < 2:1948023/140‑1 (MQ=255)
aaaCGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGa < 1:890209/140‑1 (MQ=255)
aaaCGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGa < 2:1749448/140‑1 (MQ=255)
aaaCGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGa < 1:217938/140‑1 (MQ=255)
aaaCGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGa < 2:491487/140‑1 (MQ=255)
aCGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATa > 2:1244/1‑140 (MQ=255)
aCGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATa > 2:348205/1‑140 (MQ=255)
cGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATAc < 1:1051703/140‑1 (MQ=255)
tCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGa < 2:654996/135‑1 (MQ=255)
tCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCt > 1:1090276/1‑140 (MQ=255)
ccTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCtt < 1:1155560/140‑1 (MQ=255)
ccTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCtt < 2:1438460/140‑1 (MQ=255)
cTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCttt > 2:118147/1‑140 (MQ=255)
tGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTg > 1:1931117/1‑140 (MQ=255)
aTCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGt > 1:2088700/1‑140 (MQ=255)
tCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTa < 2:2088700/140‑1 (MQ=255)
gCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACgca > 2:634693/1‑140 (MQ=255)
ctctCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACgcag < 1:1536812/140‑1 (MQ=255)
ctctCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACgcag < 2:609567/140‑1 (MQ=255)
ctcCGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACgcagca < 2:771167/140‑1 (MQ=255)
cGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCg > 2:823372/1‑140 (MQ=255)
cGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCg > 1:185733/1‑140 (MQ=255)
cGGATAACGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCg > 2:195123/1‑140 (MQ=255)
cGCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCa < 1:292653/140‑1 (MQ=255)
gCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCAc > 1:1008618/1‑140 (MQ=255)
gCCAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCAc < 1:634693/140‑1 (MQ=255)
cAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCagcagc < 1:2149720/129‑1 (MQ=255)
cAGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCagcagc > 2:2149720/1‑129 (MQ=255)
aGCGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCAc > 2:1704144/1‑137 (MQ=255)
cGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACt < 2:752613/136‑1 (MQ=255)
cGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGtt > 1:893248/1‑140 (MQ=255)
cGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGtt < 1:1728749/140‑1 (MQ=255)
cGTGTCACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGtt > 1:2305467/1‑140 (MQ=255)
cACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTtttgtt < 1:1673265/140‑1 (MQ=255)
cACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTtttgtt < 1:348205/140‑1 (MQ=255)
cACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTtttgtt < 1:195123/140‑1 (MQ=255)
cACCCGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTtttgtt < 1:1244/140‑1 (MQ=255)
cccGTCTGCATTCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTtttgtttg < 1:981418/140‑1 (MQ=255)
ccGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTtgg < 2:2047911/140‑1 (MQ=255)
cGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCTATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTtggt < 2:893248/140‑1 (MQ=255)
cGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTtggt < 1:1768498/140‑1 (MQ=255)
cGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTtggt < 2:185733/140‑1 (MQ=255)
cGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTtggt < 2:1666581/140‑1 (MQ=255)
cGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTtggt < 1:108421/140‑1 (MQ=255)
cGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTtggt < 1:722853/140‑1 (MQ=255)
cGTCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTtggt < 2:1090276/140‑1 (MQ=255)
tCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTtggtgg < 1:1371563/140‑1 (MQ=255)
tCTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTtggtgg < 1:1485780/140‑1 (MQ=255)
cTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTggtggt > 2:2024885/1‑140 (MQ=255)
cTGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTggtggt < 1:1738627/140‑1 (MQ=255)
tGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGgtggtg > 2:582364/1‑140 (MQ=255)
tGCATCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGgtggtg > 2:2298754/1‑140 (MQ=255)
tCCATCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCa < 2:140304/140‑1 (MQ=255)
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TATCCACGCGGGAGACACGGCTAAGATCGATGCAGGTAATCCCCTTCACCGCTTCCTCACGCATTTCCCAAAGCGGTAGCAAAACGTCCTGATCCAGCTCTCCGGATAACGCCAGCGTGTCACCCGTCTGCATCCAGCTCAGTGACTCGCTCATTATTTTTTCTCTTCCAGAGTGATTTTCTGTTGAGAAATCGATTTCAGTTGCGCAGTCAGGCCGTCGATACCTTTGGTACGCAGCAGCGTTCCCCACTCGTTTTGTTTGGTGGTGATCA > NC_000913/3337103‑3337374
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
