Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A11 F28 I1 R1 224 87.5 2960670 99.3% 2939945 138.5

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,018,973 A→G N40S (AAT→AGT)  ubiE → bifunctional 2‑octaprenyl‑6‑methoxy‑1,4‑benzoquinone methylase and S‑adenosylmethionine:2‑DMK methyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,018,9730AG100.0% 215.7 / NA 62N40S (AAT→AGT) ubiEbifunctional 2‑octaprenyl‑6‑methoxy‑1,4‑benzoquinone methylase and S‑adenosylmethionine:2‑DMK methyltransferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (31/31);  total (31/31)

GATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAATGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGG  >  NC_000913/4018838‑4019107
                                                                                                                                       |                                                                                                                                      
gatgaGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGAt                                                                                                                                    <  1:276943/140‑1 (MQ=255)
   gaGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTg                                                                                                                                 <  2:919418/140‑1 (MQ=255)
    aGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCACTCTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGa                                                                                                                                >  2:171452/1‑140 (MQ=255)
      cAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATg                                                                                                                              <  1:1281636/140‑1 (MQ=255)
           aTTGAGATGGTGGATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCAtt                                                                                                                         <  2:708045/140‑1 (MQ=255)
            ttGAGATGGTGGATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCAttt                                                                                                                        <  1:267575/140‑1 (MQ=255)
              gagaTGGTGGATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTgg                                                                                                                      >  1:974234/1‑140 (MQ=255)
                   ggtggATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTc                                                                                                                 >  1:522245/1‑140 (MQ=255)
                   ggtggATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTc                                                                                                                 >  1:48323/1‑140 (MQ=255)
                   ggtggATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTc                                                                                                                 >  2:979919/1‑140 (MQ=255)
                   ggtggATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTc                                                                                                                 >  1:1020784/1‑140 (MQ=255)
                    gtggATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCa                                                                                                                >  2:348590/1‑140 (MQ=255)
                    gtggATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCa                                                                                                                <  2:638591/140‑1 (MQ=255)
                    gtggATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCa                                                                                                                >  2:1221377/1‑140 (MQ=255)
                    gtggATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCa                                                                                                                >  1:638591/1‑140 (MQ=255)
                     tggGTAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCAt                                                                                                               >  2:220066/1‑140 (MQ=255)
                        aTAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGt                                                                                                            <  1:617035/140‑1 (MQ=255)
                            gTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTtgt                                                                                                        >  1:103071/1‑140 (MQ=255)
                              cacaAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTgg                                                                                                      >  2:1373023/1‑140 (MQ=255)
                               acaAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGa                                                                                                     >  1:231879/1‑140 (MQ=255)
                               acaAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGa                                                                                                     >  1:303937/1‑140 (MQ=255)
                                 aaGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAg                                                                                                   <  2:522245/140‑1 (MQ=255)
                                      acgacgCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGAtt                                                                                              >  1:75334/1‑140 (MQ=255)
                                       cgacgCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTc                                                                                             >  1:375442/1‑140 (MQ=255)
                                        gacgCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCa                                                                                            <  1:1221377/140‑1 (MQ=255)
                                        gacgCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCa                                                                                            <  2:571268/140‑1 (MQ=255)
                                         acgCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCAc                                                                                           >  1:1478931/1‑140 (MQ=255)
                                           gCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACga                                                                                         <  2:375442/140‑1 (MQ=255)
                                             aCTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACgatt                                                                                       <  2:303937/140‑1 (MQ=255)
                                             aCTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACgatt                                                                                       <  1:979919/140‑1 (MQ=255)
                                                ttGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACgattgat                                                                                    <  2:75334/140‑1 (MQ=255)
                                                      ttCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAgc                                                                              <  1:522405/140‑1 (MQ=255)
                                                         aGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAgcggc                                                                           >  1:837883/1‑140 (MQ=255)
                                                         aGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAgcggc                                                                           >  1:576116/1‑140 (MQ=255)
                                                             cGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGAGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTAc                                                                       >  1:874258/1‑140 (MQ=255)
                                                              gTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACg                                                                      >  1:1071759/1‑140 (MQ=255)
                                                                cgcgAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGcc                                                                    <  2:1313457/140‑1 (MQ=255)
                                                                cgcgAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGcc                                                                    <  1:803993/140‑1 (MQ=255)
                                                                         aCAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGa                                                           <  1:348590/140‑1 (MQ=255)
                                                                         aCAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGa                                                           <  2:1071759/140‑1 (MQ=255)
                                                                         aCAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGa                                                           <  2:576116/140‑1 (MQ=255)
                                                                         aCAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGa                                                           <  1:220066/140‑1 (MQ=255)
                                                                          cAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGAc                                                          <  1:1060269/140‑1 (MQ=255)
                                                                          cAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGAc                                                          <  2:1404771/140‑1 (MQ=255)
                                                                          cAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGAc                                                          <  2:1336185/140‑1 (MQ=255)
                                                                              aaGCGGATATGGTCGCCCACGTTTTCTATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTg                                                      <  2:1291097/140‑1 (MQ=255)
                                                                              aaGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTg                                                      <  2:103071/140‑1 (MQ=255)
                                                                                  ggATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTg                                                      >  2:653158/1‑136 (MQ=255)
                                                                                  ggATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTg                                                      <  1:653158/136‑1 (MQ=255)
                                                                                          tCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATctggct                                          <  1:358896/140‑1 (MQ=255)
                                                                                                           tCCGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCt                         >  2:255646/1‑140 (MQ=255)
                                                                                                            ccGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTg                        >  2:834047/1‑140 (MQ=255)
                                                                                                             cGTGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTGa                       <  1:834047/140‑1 (MQ=255)
                                                                                                               tGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTGACa                     >  2:1229607/1‑140 (MQ=255)
                                                                                                               tGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTGACa                     >  1:1187826/1‑140 (MQ=255)
                                                                                                               tGGCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTGACa                     >  1:527348/1‑140 (MQ=255)
                                                                                                                ggCATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTGACAg                    <  2:868560/140‑1 (MQ=255)
                                                                                                                  cATCAAAATACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTGACAGCg                  >  1:490070/1‑140 (MQ=255)
                                                                                                                       aaaTACGATGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTGACAGCGAAAtt             >  2:163091/1‑140 (MQ=255)
                                                                                                                               tGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGcc     <  2:490070/140‑1 (MQ=255)
                                                                                                                               tGTCATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGcc     >  2:788736/1‑140 (MQ=255)
                                                                                                                                  cATGAGTGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTgg  >  2:822900/1‑140 (MQ=255)
                                                                                                                                       |                                                                                                                                      
GATGAGCAGGCATTGAGATGGTGGATAAGTCACAAGAAACGACGCACTTTGGTTTTCAGACCGTCGCGAAGGAACAAAAAGCGGATATGGTCGCCCACGTTTTCCATTCCGTGGCATCAAAATACGATGTCATGAATGATTTGATGTCATTTGGTATTCATCGTTTGTGGAAGCGATTCACGATTGATTGCAGCGGCGTACGCCGTGGGCAGACCGTGCTGGATCTGGCTGGTGGCACCGGCGACCTGACAGCGAAATTCTCCCGCCTGG  >  NC_000913/4018838‑4019107

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A