Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A5 F28 I1 R1	162	86.7	2935410	99.3%	2914862	138.3

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,131,913	A→G	V693V (GTA→GTG)	metL →	fused aspartate kinase/homoserine dehydrogenase 2

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,131,913	0	A	G	100.0%	265.6 / NA	78	V693V (GTA→GTG)	metL	fused aspartate kinase/homoserine dehydrogenase 2
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (40/38); total (40/38)

GAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTACGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGTGCTGCGC  >  NC_000913/4131779‑4132045

gAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCgtgt                                                                                                                                 >  2:878384/1‑140 (MQ=255)

gAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCgtgt                                                                                                                                 <  1:1323668/140‑1 (MQ=255)

  gCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCgtg                                                                                                                                  >  1:1010450/1‑137 (MQ=255)

  gCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCgtg                                                                                                                                  <  2:1010450/137‑1 (MQ=255)

   cTGGTGGATCGGGCGTGGCAGCAGGGCTTAACCGAACCTGACGCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGTACCGGATCAGGTGCGTGTGGa                                                                                                                              <  2:1045507/140‑1 (MQ=255)

   cTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGa                                                                                                                              <  2:1134642/140‑1 (MQ=255)

    tggtggATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCTGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGaa                                                                                                                             <  2:1395756/140‑1 (MQ=255)

    tggtggATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGaa                                                                                                                             <  1:1396783/140‑1 (MQ=255)

    tggtggATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGaa                                                                                                                             >  1:494290/1‑140 (MQ=255)

    tggtggATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGaa                                                                                                                             <  1:1163111/140‑1 (MQ=255)

             aGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTg                                                                                                                    >  1:482242/1‑140 (MQ=255)

             aGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTg                                                                                                                    <  2:78949/140‑1 (MQ=255)

                cGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCt                                                                                                                 <  2:482242/140‑1 (MQ=255)

                cGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCt                                                                                                                 >  1:1090601/1‑140 (MQ=255)

                 gTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTg                                                                                                                <  2:1081290/140‑1 (MQ=255)

                    gcagcaGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTc                                                                                                             <  2:1090601/140‑1 (MQ=255)

                    gcagcaGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTc                                                                                                             >  1:1016406/1‑140 (MQ=255)

                     cagcagGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCa                                                                                                            >  1:930929/1‑140 (MQ=255)

                          gggCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCg                                                                                                       >  2:638747/1‑140 (MQ=255)

                           ggCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGa                                                                                                      >  1:391905/1‑140 (MQ=255)

                            gCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGaa                                                                                                     <  2:930929/140‑1 (MQ=255)

                                   cGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGgca                                                                                              <  1:638747/140‑1 (MQ=255)

                                     aaCCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGgcagc                                                                                            >  2:1139029/1‑140 (MQ=255)

                                      aCCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGgcagca                                                                                           >  1:1305469/1‑140 (MQ=255)

                                              cgcgTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCAt                                                                                   <  2:834254/140‑1 (MQ=255)

                                                cgTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAggcgg                                                                                                >  2:1385306/1‑125 (MQ=255)

                                                cgTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAggcgg                                                                                                <  1:1385306/125‑1 (MQ=255)

                                                cgTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCAttt                                                                                 >  2:1159596/1‑140 (MQ=255)

                                                           ctctGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATg                                                                      <  1:1159596/140‑1 (MQ=255)

                                                           ctctGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCAACCATTTCTTTGAAAATg                                                                      >  1:1408632/1‑140 (MQ=255)

                                                                 cAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGAtg                                                                >  1:1390653/1‑140 (MQ=255)

                                                                 cAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGAtg                                                                >  2:1020936/1‑140 (MQ=255)

                                                                    aGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGAtgaac                                                             >  2:1122088/1‑140 (MQ=255)

                                                                      aCGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCg                                                                   <  1:1084163/132‑1 (MQ=255)

                                                                      aCGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCg                                                                   >  2:1084163/1‑132 (MQ=255)

                                                                      aCGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGAtgaactg                                                           >  1:1115428/1‑140 (MQ=255)

                                                                      aCGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGAtgaactg                                                           >  2:1421310/1‑140 (MQ=255)

                                                                          gATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACg                                                       >  1:677121/1‑140 (MQ=255)

                                                                           aTGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGa                                                      <  2:1408632/140‑1 (MQ=255)

                                                                                cAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGa                                                 <  1:548729/140‑1 (MQ=255)

                                                                                cAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGa                                                 >  2:410393/1‑140 (MQ=255)

                                                                                cAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGa                                                 >  2:548729/1‑140 (MQ=255)

                                                                                     tGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTg                                            <  2:634489/140‑1 (MQ=255)

                                                                                      ggTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGc                                           >  1:344554/1‑140 (MQ=255)

                                                                                             cTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAg                                                  >  1:775371/1‑126 (MQ=255)

                                                                                             cTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAg                                                  <  2:775371/126‑1 (MQ=255)

                                                                                             cTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCt                                    >  1:391683/1‑140 (MQ=255)

                                                                                               ggCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCa                                                   <  1:1091978/123‑1 (MQ=255)

                                                                                               ggCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGGGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCa                                                   >  2:1091978/1‑123 (MQ=255)

                                                                                                 cgcgTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCaa                                         >  2:1226276/1‑131 (MQ=255)

                                                                                                 cgcgTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCaa                                         <  1:1226276/131‑1 (MQ=255)

                                                                                                 cgcgTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGaa                                >  2:510553/1‑140 (MQ=255)

                                                                                                 cgcgTGAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGaa                                >  1:1117544/1‑140 (MQ=255)

                                                                                                      gAAGCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGc                           <  1:1122088/140‑1 (MQ=255)

                                                                                                         gCAGGTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCcg                        <  1:193273/140‑1 (MQ=255)

                                                                                                            ggTTACAACATCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGa                     <  1:410393/140‑1 (MQ=255)

                                                                                                                 caacaTCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATgg                >  1:151935/1‑140 (MQ=255)

                                                                                                                    caTCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGc             <  2:677121/140‑1 (MQ=255)

                                                                                                                    caTCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGc             <  2:1336703/140‑1 (MQ=255)

                                                                                                                    caTCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGc             <  1:260121/140‑1 (MQ=255)

                                                                                                                      tCGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTg           <  2:1305469/140‑1 (MQ=255)

                                                                                                                       cGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTgg          <  2:151935/140‑1 (MQ=255)

                                                                                                                       cGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTgg          >  2:586218/1‑140 (MQ=255)

                                                                                                                       cGAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTgg          >  2:806263/1‑140 (MQ=255)

                                                                                                                        gAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGc             <  2:145130/136‑1 (MQ=255)

                                                                                                                        gAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGc             <  2:143655/136‑1 (MQ=255)

                                                                                                                        gAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGc             >  1:145130/1‑136 (MQ=255)

                                                                                                                        gAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGc             >  1:143655/1‑136 (MQ=255)

                                                                                                                        gAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGt         >  2:1419252/1‑140 (MQ=255)

                                                                                                                        gAACCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGt         >  1:234092/1‑140 (MQ=255)

                                                                                                                         aaCCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGtg        <  2:494290/140‑1 (MQ=255)

                                                                                                                         aaCCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGtg        <  1:586218/140‑1 (MQ=255)

                                                                                                                         aaCCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGtg        <  2:391905/140‑1 (MQ=255)

                                                                                                                         aaCCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGtg        >  2:201556/1‑140 (MQ=255)

                                                                                                                         aaCCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGtg        <  1:1421310/140‑1 (MQ=255)

                                                                                                                         aaCCGGATCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGtg        >  2:806123/1‑140 (MQ=255)

                                                                                                                               aTCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGTGCTgcgc  >  2:279594/1‑140 (MQ=255)

                                                                                                                               aTCAGGTGCGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGTGCTgcgc  <  2:1115428/140‑1 (MQ=255)

GAGCTGGTGGATCAGGCGTGGCAGCAGGGCTTAACCGAACCTGACCCGCGTGACGATCTCTCTGGCAAAGACGTGATGCGCAAGCTGGTGATTCTGGCGCGTGAAGCAGGTTACAACATCGAACCGGATCAGGTACGTGTGGAATCGCTGGTGCCTGCTCATTGCGAAGGCGGCAGCATCGACCATTTCTTTGAAAATGGCGATGAACTGAACGAGCAGATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGTGCTGCGC  >  NC_000913/4131779‑4132045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A