Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F28 I1 R1
|
161 |
75.5 |
2581324 |
99.3% |
2563254 |
138.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,556,769 |
(T)9→10 |
coding (116/144 nt) |
ytiD → |
protein YtiD |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,556,760 | 1 | . | T | 83.3%
| 286.8
/ 47.6
| 96 | coding (107/144 nt) | ytiD | protein YtiD |
| Reads supporting (aligned to +/- strand): ref base . (6/10); new base T (32/48); total (38/58) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 |
TTACAAACTAATTGTTTCAAATAATACATGGCTGATTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGT > NC_000913/4556627‑4556891
|
ttACAAACTAATTGTTTCAAATAATACATGGCTGATTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑tttttt > 1:1131316/1‑140 (MQ=255)
ttACAAACTAATTGTTTCAAATAATACATGGCTGATTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑tttttt > 1:811937/1‑140 (MQ=255)
aCAAACTAATTGTTTCAAATAATACATGGCTGATTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑tttttttt > 1:492629/1‑140 (MQ=255)
cAAACTAATTGTTTCAAATAATACATGGCTGATTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑ttttttttt < 2:740094/140‑1 (MQ=255)
tttCAAATAATACATGGCTGATTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTtgatga > 2:90047/1‑140 (MQ=255)
tCAAATAATACATGGCTGATTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTgatgat < 1:894190/140‑1 (MQ=255)
tCAAATAATACATGGCTGATTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGAtt > 1:273973/1‑140 (MQ=255)
cAAATAATACATGGCTGATTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGAtt > 2:974875/1‑140 (MQ=255)
ataataCATGGCTGATTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTa > 2:878066/1‑140 (MQ=255)
tGGCTGATTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATc > 1:603188/1‑140 (MQ=255)
ggCTGATTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCa > 1:861646/1‑140 (MQ=255)
aTTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACt > 2:440776/1‑140 (MQ=255)
aTTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACt > 1:467981/1‑140 (MQ=255)
aTTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACt > 1:935686/1‑140 (MQ=255)
aTTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACt > 2:719623/1‑140 (MQ=255)
aTTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGCATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACt > 2:652636/1‑140 (MQ=255)
gCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGTTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACtttt > 2:278130/1‑139 (MQ=255)
gCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGTTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACtttt < 1:278130/139‑1 (MQ=255)
gCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACtttttt > 1:144732/1‑140 (MQ=255)
cGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTc > 2:751633/1‑140 (MQ=255)
aaataaatAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGa < 1:176019/140‑1 (MQ=255)
aaataaatAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGa < 1:479309/140‑1 (MQ=255)
aataaataATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGa < 2:703791/140‑1 (MQ=255)
aataaataATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGa < 2:705152/140‑1 (MQ=255)
aataaataATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaa > 1:1000935/1‑140 (MQ=255)
ataaataaTTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaa > 2:1186774/1‑140 (MQ=255)
taaataaTTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaaaa < 2:1000935/140‑1 (MQ=255)
aataatTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAg < 1:719623/140‑1 (MQ=255)
taatTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTc < 2:467981/140‑1 (MQ=255)
atTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAg < 2:203460/140‑1 (MQ=255)
atTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAg < 2:1016442/140‑1 (MQ=255)
atTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAg < 2:935686/140‑1 (MQ=255)
tttCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGt < 1:450652/140‑1 (MQ=255)
tttCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGt < 1:673242/140‑1 (MQ=255)
ttCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTa < 1:1100788/140‑1 (MQ=255)
ttCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAg < 1:483916/140‑1 (MQ=255)
tCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGTTTTTTTTTTTGGGTTTGAGGATTTTTATCAAATCATGACTTTTTTCTTAAAAAGTCAgaa > 1:1025153/1‑138 (MQ=255)
tCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCa > 2:43741/1‑136 (MQ=255)
tCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCa < 1:43741/136‑1 (MQ=255)
tCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAg > 1:391146/1‑140 (MQ=255)
cccACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGa < 1:1142646/140‑1 (MQ=255)
cccACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGa < 2:391146/140‑1 (MQ=255)
cccACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGat < 1:90047/140‑1 (MQ=255)
ccGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAg < 1:1126094/132‑1 (MQ=255)
ccGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAg > 2:1126094/1‑132 (MQ=255)
ggAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGTTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTc < 1:723267/140‑1 (MQ=255)
gAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCAt < 2:78645/140‑1 (MQ=255)
gAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATa < 1:878066/140‑1 (MQ=255)
aaTTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATa < 1:366159/140‑1 (MQ=255)
aaTTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATa < 1:751633/140‑1 (MQ=255)
aaTTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATa < 2:1160605/140‑1 (MQ=255)
aTTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAg < 1:563907/140‑1 (MQ=255)
tAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGc < 1:440776/140‑1 (MQ=255)
aGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAg > 1:841982/1‑135 (MQ=255)
aGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAg < 2:841982/135‑1 (MQ=255)
agcagcGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTa < 1:974875/140‑1 (MQ=255)
agcagcGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTa < 2:266022/140‑1 (MQ=255)
agcagcGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTa < 2:184917/140‑1 (MQ=255)
agcagcGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTa < 2:603188/140‑1 (MQ=255)
cagcGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAg < 1:1186774/140‑1 (MQ=255)
gTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGtttt > 2:1067941/1‑140 (MQ=255)
aCAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTtata < 2:1131316/140‑1 (MQ=255)
ttttCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCt > 1:642203/1‑140 (MQ=255)
tCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGAc < 2:861646/140‑1 (MQ=255)
taTCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACa < 2:287519/139‑1 (MQ=255)
cATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACa < 2:642203/140‑1 (MQ=255)
aTCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAg > 2:964317/1‑140 (MQ=255)
tACGTAACTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGAt > 1:671189/1‑140 (MQ=255)
tACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGAtt > 1:503150/1‑140 (MQ=255)
tAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAgg < 1:213694/140‑1 (MQ=255)
aaCTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGc < 2:503150/140‑1 (MQ=255)
aCTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGc < 2:332489/140‑1 (MQ=255)
aCTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGc < 1:652636/140‑1 (MQ=255)
aCTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGc < 2:187444/140‑1 (MQ=255)
aCTATTCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGc < 1:964317/140‑1 (MQ=255)
ttCGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGt > 2:735032/1‑140 (MQ=255)
cGGAATATTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGtct < 2:862109/140‑1 (MQ=255)
atatTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGa < 2:492629/140‑1 (MQ=255)
atatTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGa < 2:144732/140‑1 (MQ=255)
tatTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGc < 1:51140/129‑1 (MQ=255)
tatTCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGc > 2:51140/1‑129 (MQ=255)
ttCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTg > 1:282392/1‑140 (MQ=255)
tCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGc > 2:27555/1‑126 (MQ=255)
tCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGc < 1:27555/126‑1 (MQ=255)
tCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGa < 2:671189/140‑1 (MQ=255)
tCAGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGa < 2:837268/140‑1 (MQ=255)
cAGAATATACTAGCTGT‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGAc < 1:287475/140‑1 (MQ=255)
aGAATATACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACa < 2:811937/140‑1 (MQ=255)
atatACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCa < 1:460027/129‑1 (MQ=255)
atatACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCa > 2:460027/1‑129 (MQ=255)
atatACTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATgg > 1:1045643/1‑140 (MQ=255)
ataCTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGAt < 2:901120/140‑1 (MQ=255)
ataCTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGAt < 2:912233/140‑1 (MQ=255)
aCTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACa > 2:818882/1‑133 (MQ=255)
aCTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACa < 1:818882/133‑1 (MQ=255)
aCTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGt > 2:319920/1‑140 (MQ=255)
aCTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGt > 1:164396/1‑140 (MQ=255)
aCTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGt > 2:1281726/1‑140 (MQ=255)
aCTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGt > 1:1115396/1‑140 (MQ=255)
aCTAGC‑GGT‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGt > 1:1190909/1‑140 (MQ=255)
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TTACAAACTAATTGTTTCAAATAATACATGGCTGATTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGC‑GG‑‑TTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGATTCAGGCCTGTCTCAGACTGACATGGATGT > NC_000913/4556627‑4556891
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
