Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A4 F28 I1 R1	159	82.1	2830106	99.3%	2810295	139.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,270,488	(C)_7→8	noncoding (105/377 nt)	rnpB ←	RNase P catalytic RNA component

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,270,481	1	.	C	97.8%	158.6 / ‑3.3	45	noncoding (112/377 nt)	rnpB	RNase P catalytic RNA component
Reads supporting (aligned to +/- strand): ref base . (1/0); new base C (11/33); total (12/33)
Fisher's exact test for biased strand distribution p-value = 2.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01

CCTTGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTT‑CCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTG  >  NC_000913/3270342‑3270614

ccTTGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGttt                                                                                                                                          <  1:927689/140‑1 (MQ=255)

   tGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTTTTGCCCTCGTC‑G‑T‑GGGTTT‑tcc                                                                                                                                      >  2:122114/1‑140 (MQ=255)

     cTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTTTCTCTGTTGCACTGGTC‑C‑T‑GGGGTT‑tcccc                                                                                                                                    >  2:235215/1‑140 (MQ=255)

          ggTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTTTTGCCCTCGTCGG‑G‑GGGTTT‑ccccccccc                                                                                                                                >  2:585438/1‑138 (MQ=255)

             ggAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCg                                                                                                                             <  2:278476/140‑1 (MQ=255)

             ggAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCg                                                                                                                             <  1:1281481/140‑1 (MQ=255)

             ggAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCg                                                                                                                             <  1:981648/140‑1 (MQ=255)

                       gTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCa                                                                                                                   <  1:585438/140‑1 (MQ=255)

                         gCCACGGACTTTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTCTTGCACTGGTC‑G‑TGGGGTTT‑CCCCCCCCCGCGTTTCCTGGCAcc                                                                                                                 >  1:1107403/1‑140 (MQ=255)

                         gCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCAcc                                                                                                                 <  2:999279/140‑1 (MQ=255)

                         gCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCAcc                                                                                                                 <  2:932428/140‑1 (MQ=255)

                         gCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCAcc                                                                                                                 <  2:688276/140‑1 (MQ=255)

                         gCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCAcc                                                                                                                 <  1:296966/140‑1 (MQ=255)

                         gCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCAcc                                                                                                                 <  1:235215/140‑1 (MQ=255)

                         gCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCAcc                                                                                                                 <  1:1414786/140‑1 (MQ=255)

                           cACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTTTTGCACTGGTCGG‑G‑GGGTTT‑CCCCCCCCCGCGTTTCCTGGCccccc                                                                                                               >  2:170565/1‑139 (MQ=255)

                                   gTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑TGGGGTTT‑CCCCCCCCGGCGTTACCTGGCCCCCTGCCCCA‑Tg                                                                                                      >  1:89407/1‑140 (MQ=255)

                                          gCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCGCTCTGTTTCACTCGAT‑C‑T‑GGGTTTCCCCCCCCCGGCGTTCACCGGCACCCTTCCCTA‑TCGG‑Gcccc                                                                                              >  2:498204/1‑139 (MQ=255)

                                              cgcgGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTTTTGCACCGGTC‑GCG‑GGGGTT‑CCCCCCCCCGCGGTTCCCCGCACCCCCCCCCC‑CGGA‑Gccccggcc                                                                                          >  2:974613/1‑135 (MQ=255)

                                              cgcgGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTTTTTCCCTGGGCGG‑G‑GGGTTT‑CCCCCCCCCGCGGTACCTGGCACCCCCCCCCC‑TGGA‑Gccccgcct                                                                                          >  2:774099/1‑135 (MQ=255)

                                              cgcgGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACt                                                                                          <  1:460980/140‑1 (MQ=255)

                                              cgcgGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACt                                                                                          <  2:117723/140‑1 (MQ=255)

                                                  gTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTtcc                                                                                      <  1:851758/140‑1 (MQ=255)

                                                  gTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTtcc                                                                                      <  1:122114/140‑1 (MQ=255)

                                                                  cccTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTTTTTCACTGGGCGG‑G‑GGGTTC‑CCCCCCCCCGCGGTACCCTGCACCCCGCCCCATTGGG‑GCCCGG‑CCTTCCTCcccccccccccccc                                                                      >  2:1215569/1‑136 (MQ=255)

                                                                  cccTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTCTCTCTTTTTCACTCGGC‑G‑TGGGGTTT‑CCCCCCCCCGCGGTTCCCGGCCCCCCCCCCCC‑TTGAGGCCCGGCCTTTccccccccccccccccc                                                                       >  2:755930/1‑137 (MQ=255)

                                                                           ccTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAag                                                             <  2:255081/140‑1 (MQ=255)

                                                                             ttACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAagag                                                           <  1:104770/140‑1 (MQ=255)

                                                                              tACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAgg                                                          >  2:1134307/1‑140 (MQ=255)

                                                                               aCCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTTGTCTCTTTTGCACTGGTC‑G‑TGGGGTTC‑CCCCCCCACGCGTTACCTGGCCCCCCGCCCCC‑TGGA‑GCCCGGGCTTTCCTCCCCCCCCCCCCCCTCCCCCCCAGAggg                                                         >  2:9072/1‑139 (MQ=255)

                                                                                      cccGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGgacgacgac                                                  <  1:1169548/140‑1 (MQ=255)

                                                                                         gCTTGCGCGGGCCATCGGCGGTTTTCTCTCTTTTTCACTTGGC‑G‑TGGGGTTT‑CCCCCCCCCGCGGTACCTGGCACCCCTCCCCA‑TGGA‑GGCCGGCCTTTCCTCCCCCCCCCCCCCCTCCCCCCCAGGGGGCGACGGCGaa                                               >  2:159673/1‑140 (MQ=255)

                                                                                         gCTTGCGCGGGCCATCGGCGGTTTGGTCTCTTTTGCACTGGTC‑G‑TGGGGTTC‑CCCCCCCCGGCGTTTCCTGGCACCCCGCCCCC‑TTGA‑GCCCCGCCTTTCCTCCCCCCCCCCCCCCTCCCCCCAAGAGGGCGGCGACGaa                                               >  2:208143/1‑140 (MQ=255)

                                                                                         gCTTGCGCGGGCCATCGGCGGTTTGCTCTCTTTTGCACCGGGC‑G‑TGGGGTTT‑CCCCCCCCGGCGGTTCCCGGCCCCCCGCCCCC‑TGGG‑GCCCGGGCTTTCCCCCCCCCCCCCCCTCTCCCCCCCAGAGGacgacgacgga                                               >  2:20149/1‑138 (MQ=255)

                                                                                          cTTGCGCGGGCCATCGGCGGTTTTCTCTCTGTTGCACTGGTC‑G‑TGGGGTTC‑CCCCCCCCGGCGGTACCTGGCACCCCCCCCCC‑TGGA‑GCCCCGGCTTTCCTCCCCCCCCCCCCCCTCCCCCCCAGAGGGCGGCGGCGGAg                                              >  2:1169548/1‑140 (MQ=255)

                                                                                          cTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAg                                              <  2:1087393/140‑1 (MQ=255)

                                                                                              cgcgGGCCATCGGCGGTTTTTTCTCTGTTTGACTGGTC‑C‑TGGGGTTTCCCCCCCCCGGGGTTTCCCGGCCCCCCCCCCCT‑TGGG‑GCCCCGGCCTTCCCCCCCCCCCCCCCCCTCCCCCCCAAAGGGCCACGACGAAgggg                                           >  2:86876/1‑140 (MQ=255)

                                                                                                 gggCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGAc                                       <  1:1215569/140‑1 (MQ=255)

                                                                                                    ccATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGt                                    <  1:974613/140‑1 (MQ=255)

                                                                                                     cATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTc                                   <  1:498204/140‑1 (MQ=255)

                                                                                                             gTTTTCTCTCTTTTGCACTGGTC‑C‑TGGGGTTC‑CCCCCCCCCGCGGTACCTGGCCCCCCGCCCCA‑TGGA‑GCCCGGGCTTTCCTCCCCCCCCCCCCGCTCCCCCCAAGAGGACGACGACGAAGCGGGGGCTGTCTGGGCAGc                           >  2:111985/1‑140 (MQ=255)

                                                                                                             gTTTTCTCTCTGTTGCCCTGGTC‑G‑TGGGGTTC‑CCCCCCCCGGCGGTTCCCGGCCCCCTGCCCCA‑TGGG‑GCCCGGGCCTTCCTCCCCCCCCCCCCTCTCCCCCCCAGAGGACGACGACGAAGCGGCGACTGTCTGGTCCGc                           >  2:118398/1‑140 (MQ=255)

                                                                                                                 gCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTTCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCg                       <  2:967310/140‑1 (MQ=255)

                                                                                                                 gCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCg                       <  1:170565/140‑1 (MQ=255)

                                                                                                                 gCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCg                       <  1:117374/140‑1 (MQ=255)

                                                                                                                      ctGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgcgcg                  <  1:774099/140‑1 (MQ=255)

                                                                                                                      ctGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgcgcg                  <  1:208143/140‑1 (MQ=255)

                                                                                                                       tGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGATTTCCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGGCGAAGCGGCGACTGTCTGGTAAGCTTCGgcgcgc                 <  2:1148341/140‑1 (MQ=255)

                                                                                                                       tGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgcgcgc                 <  2:1107403/140‑1 (MQ=255)

                                                                                                                       tGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgcgcgc                 <  2:451635/140‑1 (MQ=255)

                                                                                                                       tGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgcgcgc                 <  1:1134307/140‑1 (MQ=255)

                                                                                                                       tGTTGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgcgcgc                 <  1:755930/140‑1 (MQ=255)

                                                                                                                          tGCACTGGTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGt              >  2:837665/1‑140 (MQ=255)

                                                                                                                                 gTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTGAGCTTCGgcgcgc                 <  2:334693/130‑1 (MQ=255)

                                                                                                                                 gTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTGAGCTTCGgcgcgc                 >  1:334693/1‑130 (MQ=255)

                                                                                                                                 gTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgcgcgc                 <  1:294517/130‑1 (MQ=255)

                                                                                                                                 gTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgcgcgc                 >  2:294517/1‑130 (MQ=255)

                                                                                                                                 gTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgcgcg                  <  1:425101/129‑1 (MQ=255)

                                                                                                                                 gTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGgcgcg                  >  2:425101/1‑129 (MQ=255)

                                                                                                                                 gTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAgg       >  2:546475/1‑140 (MQ=255)

                                                                                                                                 gTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAgg       >  2:326565/1‑140 (MQ=255)

                                                                                                                                 gTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAgg       >  2:288748/1‑140 (MQ=255)

                                                                                                                                 gTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAgg       >  1:1179268/1‑140 (MQ=255)

                                                                                                                                 gTC‑G‑T‑GGGTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAgg       >  1:981807/1‑140 (MQ=255)

                                                                                                                                         gggTTTCCCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTg  >  2:1164183/1‑140 (MQ=255)

CCTTGCTCCGGGTGGAGTTTACCGTGCCACGGACTGTTACCAGCCGCGCGGTGCGCTCTTACCGCACCCTTTCACCCTTACCTGATCCCGCTTGCGCGGGCCATCGGCGGTTTGCTCTCTGTTGCACTGGTC‑G‑T‑GGGTTT‑CCCCCCCAGGCGTTACCTGGCACCCTGCCCTA‑TGGA‑GCCCGGACTTTCCTCCCCTCCGCCCGTCTCCCCCGAAGAGGACGACGACGAAGCGGCGACTGTCTGGTCAGCTTCGGCGCGCAGTATAGAGGGTTTG  >  NC_000913/3270342‑3270614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A