Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A12 F73 I1 R1 28 94.5 3320338 99.3% 3297095 139.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,514,306 C→T M1M (ATG→ATA) † fecB ← ferric citrate ABC transporter periplasmic binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,514,3060CT100.0% 218.4 / NA 63M1M (ATG→ATA) †fecBferric citrate ABC transporter periplasmic binding protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (24/39);  total (24/39)

AACGAGAGTTCCAGCACCACAATCCGTTGTGGCGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAACATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGATGCCTTTGTTGTTGTCGTCATAAGAGCGGATGAAG  >  NC_000913/4514169‑4514440
                                                                                                                                         |                                                                                                                                      
aaCGAGAGTTCCAGCACCACAATCCGTTGTGGCGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAatat                                                                                                                                      >  1:1182472/1‑140 (MQ=255)
aaCGAGAGTTCCAGCACCACAATCCGTTGTGGCGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAatat                                                                                                                                      >  2:817017/1‑140 (MQ=255)
                  acaATCCGTTGTGGCGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAATCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTaaa                                                                                                                    >  1:850821/1‑140 (MQ=255)
                  acaATCCGTTGTGGCGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTaaa                                                                                                                    >  1:284227/1‑140 (MQ=255)
                   caATCCGTTGTGGCGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTaaaa                                                                                                                   >  2:1155904/1‑140 (MQ=255)
                        cGTTGTGGCGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCg                                                                                                              >  2:1554781/1‑140 (MQ=255)
                          ttGTGGCGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGc                                                                                                            >  2:1365925/1‑140 (MQ=255)
                           tgtgGCGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGc                                                                                                            >  2:947923/1‑139 (MQ=255)
                           tgtgGCGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGc                                                                                                            <  1:947923/139‑1 (MQ=255)
                              ggCGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGTCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGc                                                                                                        <  2:836633/140‑1 (MQ=255)
                              ggCGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGc                                                                                                        <  2:1503646/140‑1 (MQ=255)
                              ggCGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGc                                                                                                        <  1:751296/140‑1 (MQ=255)
                                cGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCg                                                                                                      <  1:1554781/140‑1 (MQ=255)
                                        cGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTaa                                                                                              <  1:562404/140‑1 (MQ=255)
                                             gtAAACGTGCCGTGTTCGTCCTGAATCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACAt                                                                                         <  2:850821/140‑1 (MQ=255)
                                             gtAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACAt                                                                                         <  1:1155904/140‑1 (MQ=255)
                                              tAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATc                                                                                        >  1:22206/1‑140 (MQ=255)
                                                     gCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTaa                                                                                              >  2:153780/1‑127 (MQ=255)
                                                     gCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTaa                                                                                              <  1:153780/127‑1 (MQ=255)
                                                     gCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACtt                                                                                 >  1:774805/1‑140 (MQ=255)
                                                     gCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACtt                                                                                 >  1:183421/1‑140 (MQ=255)
                                                      ccGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTc                                                                                >  2:263784/1‑140 (MQ=255)
                                                        gtgtTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCaa                                                                              >  2:58675/1‑140 (MQ=255)
                                                           ttCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGa                                                                           >  1:648338/1‑140 (MQ=255)
                                                            tCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGAc                                                                          <  1:817017/140‑1 (MQ=255)
                                                             cGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGAcc                                                                         <  2:289681/140‑1 (MQ=255)
                                                             cGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGAcc                                                                         <  2:1195550/140‑1 (MQ=255)
                                                             cGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGAcc                                                                         <  2:1182472/140‑1 (MQ=255)
                                                             cGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGAcc                                                                         <  1:1218778/140‑1 (MQ=255)
                                                             cGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGAcc                                                                         <  2:248535/140‑1 (MQ=255)
                                                             cGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGAcc                                                                         <  1:956738/140‑1 (MQ=255)
                                                             cGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGAcc                                                                         <  2:774805/140‑1 (MQ=255)
                                                             cGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGAcc                                                                         <  1:771288/140‑1 (MQ=255)
                                                             cGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGAcc                                                                         <  2:284227/140‑1 (MQ=255)
                                                               tCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGAcccc                                                                       <  2:319251/140‑1 (MQ=255)
                                                                 cTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTg                                                                     <  1:1365925/140‑1 (MQ=255)
                                                                 cTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTg                                                                     <  1:20804/140‑1 (MQ=255)
                                                                   gAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCa                                                                   >  1:815206/1‑140 (MQ=255)
                                                                         tGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGa                                                                           >  1:1256053/1‑126 (MQ=255)
                                                                         tGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGa                                                                           <  2:1256053/126‑1 (MQ=255)
                                                                         tGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACa                                                             >  2:1078668/1‑140 (MQ=255)
                                                                         tGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACa                                                             >  1:1421967/1‑140 (MQ=255)
                                                                          ggcggcAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAg                                                            >  2:422505/1‑140 (MQ=255)
                                                                              gcAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTg                                                        <  2:648338/140‑1 (MQ=255)
                                                                              gcAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTg                                                        <  2:22206/140‑1 (MQ=255)
                                                                                   ggCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCgg                                                   <  2:688836/140‑1 (MQ=255)
                                                                                      gTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTg                                                <  2:1421967/140‑1 (MQ=255)
                                                                                       tGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTTAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTgg                                               >  1:325022/1‑140 (MQ=255)
                                                                                         gCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGcc                                             >  1:970284/1‑140 (MQ=255)
                                                                                         gCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGcc                                             >  1:521963/1‑140 (MQ=255)
                                                                                                 ccAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGa                                     <  1:422505/140‑1 (MQ=255)
                                                                                                 ccAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGa                                     <  2:521963/140‑1 (MQ=255)
                                                                                                 ccAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGa                                     <  2:183421/140‑1 (MQ=255)
                                                                                                        cagGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGTCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGATGCCttt                              >  1:1219002/1‑140 (MQ=255)
                                                                                                        cagGCCTGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGATGCCttt                              >  2:1132299/1‑140 (MQ=255)
                                                                                                              tGCAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGATGCCTttgttgtt                        <  1:1132299/140‑1 (MQ=255)
                                                                                                                cAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGATGCCTTtgttgttgt                      >  1:376658/1‑140 (MQ=255)
                                                                                                                cAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGATGCCTTtgttgttgt                      <  1:1078668/140‑1 (MQ=255)
                                                                                                                cAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGATGCCTTtgttgttgt                      <  2:1628345/140‑1 (MQ=255)
                                                                                                                cAAAAAGAAAACGGATAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGATGCCTTtgttgttgt                      <  2:815206/140‑1 (MQ=255)
                                                                                                                               tAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGTCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGATGCCTTTGTTGTTGTCGTCATAAGAGCGGa       <  2:1219002/140‑1 (MQ=255)
                                                                                                                               tAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGATGCCTTTGTTGTTGTCGTCATAAGAGCGGa       <  1:263784/140‑1 (MQ=255)
                                                                                                                               tAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGATGCCTTTGTTGTTGTCGTCATAAGAGCGGa       <  1:29724/140‑1 (MQ=255)
                                                                                                                               tAAATGCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGATGCCTTTGTTGTTGTCGTCATAAGAGCGGa       <  2:1145129/140‑1 (MQ=255)
                                                                                                                                    gCCAATATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGATGCCTTTGTTGTTGTCGTCATAAGAGCGGATGAag  <  2:376658/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                      
AACGAGAGTTCCAGCACCACAATCCGTTGTGGCGTTTTTTCGAGTGTAAACGTGCCGTGTTCGTCCTGAACCGTGGCGGCAAAGGCGTGGCTGATCACCAGCAGCAGGCCTGCAAAAAGAAAACGGATAAATGCCAACATAATCACATTCCAGCTAAAAGCCCGGCAAGCCGGGCGTTAACACATCAGAACTTCAACGACCCCTGCATATACAGCGTGCGCGGCTGGCCTGCATAGATGCCTTTGTTGTTGTCGTCATAAGAGCGGATGAAG  >  NC_000913/4514169‑4514440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A