Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F73 I1 R1
|
34 |
113.1 |
3988162 |
99.3% |
3960244 |
139.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,524,734 |
G→T |
H93N (CAT→AAT) |
yjhH ← |
KpLE2 phage‑like element; putative 2‑dehydro‑3‑deoxy‑D‑pentonate aldolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,524,734 | 0 | G | T | 100.0%
| 386.4
/ NA
| 107 | H93N (CAT→AAT) | yjhH | KpLE2 phage‑like element; putative 2‑dehydro‑3‑deoxy‑D‑pentonate aldolase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (54/53); total (54/53) |
Only 100 of 111 total aligned reads displayed.
AAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCAC > NC_000913/4524600‑4524868
|
aaaGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTgcg < 1:1739440/140‑1 (MQ=255)
ttGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAg < 1:266573/140‑1 (MQ=255)
aCAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTg < 2:551435/140‑1 (MQ=255)
aGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGAc < 2:1749432/140‑1 (MQ=255)
ggATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGAcc < 2:1031967/140‑1 (MQ=255)
gATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCg > 2:1971330/1‑140 (MQ=255)
aTCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGc < 1:1271321/140‑1 (MQ=255)
tCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGc > 1:723515/1‑139 (MQ=255)
tCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGc < 2:723515/139‑1 (MQ=255)
tCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCt > 1:840289/1‑140 (MQ=255)
tCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCt > 2:1778127/1‑140 (MQ=255)
tCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCt > 2:360024/1‑140 (MQ=255)
tCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCt < 2:835711/140‑1 (MQ=255)
ccGGTAGGGTGACGCTACGGGCGATCTGCTGGTCATAGACGTCATGATTTCGTGGCGCGACTTTCCAGGAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCCTGCGCATTCTGCGCCAGTTTGTCTGCTTCg > 2:917805/1‑140 (MQ=255)
ccGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCg > 2:130373/1‑140 (MQ=255)
cGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGt < 2:1654312/140‑1 (MQ=255)
aGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGt > 1:857878/1‑140 (MQ=255)
gggTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTg < 1:1569855/140‑1 (MQ=255)
ggTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTgg > 2:270804/1‑140 (MQ=255)
tGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGaa > 1:1082276/1‑140 (MQ=255)
tGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGaa > 2:452984/1‑140 (MQ=255)
gCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAgggg > 2:1824624/1‑140 (MQ=255)
cGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGt > 1:1691756/1‑124 (MQ=255)
cGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGt < 2:1691756/124‑1 (MQ=255)
cGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTgg > 1:1575392/1‑130 (MQ=255)
cGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTgg < 2:1575392/130‑1 (MQ=255)
cGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAAcc > 2:189244/1‑140 (MQ=255)
cGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAAcc > 2:1375832/1‑140 (MQ=255)
gggCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCg > 2:338573/1‑140 (MQ=255)
gggCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCg > 2:203871/1‑140 (MQ=255)
ggCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGa < 2:180034/140‑1 (MQ=255)
cGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACg < 2:1031196/140‑1 (MQ=255)
gATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGc < 1:824648/140‑1 (MQ=255)
aTCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTT‑ACCGCTTCGTCAGTGGAAGGGGAACCGACGCca > 1:1388862/1‑140 (MQ=255)
tCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCca < 1:338573/140‑1 (MQ=255)
ctgctgGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCcaa < 2:242238/140‑1 (MQ=255)
tgctgGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCcaat < 1:130373/140‑1 (MQ=255)
ggTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCcaatcaat > 2:1693079/1‑140 (MQ=255)
ggTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCcaatcaat > 1:1193606/1‑140 (MQ=255)
aGTCGTGAAGCTTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCATCGATTGCGGCAGGGGAACCGACGCCAATCAATACCgga > 2:951366/1‑139 (MQ=255)
tcgtcAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCAc > 1:1363740/1‑140 (MQ=255)
cgtcAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACt < 1:777406/140‑1 (MQ=255)
tcAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCg > 1:789140/1‑140 (MQ=255)
tcAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCg > 1:1109595/1‑140 (MQ=255)
tcAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCg > 1:1391783/1‑140 (MQ=255)
gATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCg < 2:1140340/140‑1 (MQ=255)
gATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCg < 2:857878/140‑1 (MQ=255)
gtggtgCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACa < 1:203871/140‑1 (MQ=255)
tggtgCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACaa < 1:1824624/140‑1 (MQ=255)
gtgCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATg < 2:965562/140‑1 (MQ=255)
gCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGt > 2:1594792/1‑140 (MQ=255)
gCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGt > 1:582076/1‑140 (MQ=255)
cAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGcttc > 2:174077/1‑140 (MQ=255)
gtagGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCgg > 2:1064459/1‑140 (MQ=255)
gtagGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCgg > 1:1282572/1‑140 (MQ=255)
ggggTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGa > 1:1087769/1‑140 (MQ=255)
ggggTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGa > 1:1453987/1‑140 (MQ=255)
ggggTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGa > 2:1956197/1‑140 (MQ=255)
tGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGcc > 2:1712024/1‑140 (MQ=255)
gATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCa > 1:429467/1‑140 (MQ=255)
tGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGcc < 1:1229110/137‑1 (MQ=255)
tGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGcc > 2:1229110/1‑137 (MQ=255)
gCGACGATACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATgcg < 1:578446/140‑1 (MQ=255)
cgacgaTACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATgcgc < 1:174077/140‑1 (MQ=255)
gacgaTACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCt < 1:1778127/140‑1 (MQ=255)
gacgaTACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCt < 1:1594792/140‑1 (MQ=255)
gacgaTACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCt < 1:1693079/140‑1 (MQ=255)
gacgaTACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCt < 1:1786743/140‑1 (MQ=255)
gacgaTACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCt < 1:452984/140‑1 (MQ=255)
acgaTACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTg > 2:1770939/1‑140 (MQ=255)
acgaTACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTg > 1:682326/1‑140 (MQ=255)
cgaTACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTgg < 2:855522/140‑1 (MQ=255)
gaTACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTggg < 2:1193606/140‑1 (MQ=255)
gaTACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTggg < 1:360024/140‑1 (MQ=255)
gaTACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTggg < 2:1087769/140‑1 (MQ=255)
gaTACCATCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTggg < 2:1032400/140‑1 (MQ=255)
aTCAGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTTGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTAt > 2:544956/1‑140 (MQ=255)
aGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCa > 1:1195077/1‑140 (MQ=255)
aGCGCCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCa < 1:270804/140‑1 (MQ=255)
cgcCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTggg < 2:918659/129‑1 (MQ=255)
cgcCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTgg < 1:1395288/128‑1 (MQ=255)
cgcCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTgg > 2:1395288/1‑128 (MQ=255)
gcCGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCAttt > 1:147873/1‑140 (MQ=255)
ccGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTg > 1:1473839/1‑140 (MQ=255)
cGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATTAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTgg < 2:439320/140‑1 (MQ=255)
cGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTgg > 1:1701432/1‑140 (MQ=255)
cGTAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTgg < 2:159970/140‑1 (MQ=255)
tAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCt < 2:147873/140‑1 (MQ=255)
tAGGCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCt < 1:971119/140‑1 (MQ=255)
tAGGCTGGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGGCGAGCGTGGTTACCGCTTCTTCGGCGAGTGCCATGCCCTGGGCTGGATTCATTTGGCt > 2:538543/1‑140 (MQ=255)
gCTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTaaa < 2:840289/140‑1 (MQ=255)
cTTGCGCATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAAt < 2:144996/140‑1 (MQ=255)
gcgcATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTca > 2:556521/1‑140 (MQ=255)
cgcATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCAtt < 2:790299/127‑1 (MQ=255)
cgcATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCAtt > 1:790299/1‑127 (MQ=255)
cgcATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTgg < 1:1664967/130‑1 (MQ=255)
cgcATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTgg > 2:1664967/1‑130 (MQ=255)
cgcATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTcac > 2:265004/1‑140 (MQ=255)
cgcATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTcac < 2:1363740/140‑1 (MQ=255)
cgcATTCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTcac < 1:751032/140‑1 (MQ=255)
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AAAGTTGTACAGGATCACCGGTAGGGTGACGCTACGGGCGATCTGCTGGTAATAGTCGTCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCAC > NC_000913/4524600‑4524868
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
