Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F73 I1 R1
|
26 |
114.7 |
3982346 |
99.4% |
3958451 |
139.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,243,503 |
G→T |
S413R (AGC→AGA) |
uxaC ← |
D‑glucoronate/D‑galacturonate isomerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,243,503 | 0 | G | T | 100.0%
| 348.7
/ NA
| 99 | S413R (AGC→AGA) | uxaC | D‑glucoronate/D‑galacturonate isomerase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (53/46); total (53/46) |
Only 100 of 102 total aligned reads displayed.
TTAAAGCAAATATTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGGCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGCCCGGCATACCTTCG > NC_000913/3243366‑3243638
|
ttAAAGCAAATATTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCt > 2:581359/1‑140 (MQ=255)
aaaGCAAATATTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTgt > 2:1110847/1‑140 (MQ=255)
cAAATATTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTgtcagt > 1:1525948/1‑140 (MQ=255)
aaaTATTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTgtcagtc < 1:499475/140‑1 (MQ=255)
aaaTATTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTgtcagtc < 1:1600934/140‑1 (MQ=255)
aaTATTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTgtcagtca > 1:1334708/1‑140 (MQ=255)
aaTATTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTgtcagtca > 2:1162014/1‑140 (MQ=255)
aaTATTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTgtcagtca > 1:1512050/1‑140 (MQ=255)
aaTATTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTgtcagtca > 2:1947158/1‑140 (MQ=255)
atatTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGtcagtcag > 1:561516/1‑140 (MQ=255)
tatTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGc > 1:1843705/1‑140 (MQ=255)
tatTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGc > 2:1141146/1‑140 (MQ=255)
tatTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGc > 1:265052/1‑140 (MQ=255)
tatTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTACTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGc > 1:196945/1‑140 (MQ=255)
atTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCa < 1:1439955/140‑1 (MQ=255)
cATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACaa < 2:414474/140‑1 (MQ=255)
tctcGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAg < 1:291419/140‑1 (MQ=255)
tctcGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAg < 2:1334708/140‑1 (MQ=255)
ggTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGa > 2:476740/1‑140 (MQ=255)
ggTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGa > 1:191580/1‑140 (MQ=255)
ggTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGa > 1:1387165/1‑140 (MQ=255)
ggTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGAGCATCTGGCACAGAATGCGGCGGAAGTATTCCTTACGGGCGTTTGACAGGAAGCTACGTCTGTCAGTCAGCATACCGTCAAAGCGGCTcaggagg > 2:919430/1‑139 (MQ=255)
gTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGAc < 2:1078566/140‑1 (MQ=255)
gTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGAc < 1:236238/140‑1 (MQ=255)
tGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCg > 2:1388392/1‑140 (MQ=255)
tGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGc > 2:1835890/1‑140 (MQ=255)
gTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCt > 2:1176256/1‑140 (MQ=255)
tCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTg < 1:1045046/140‑1 (MQ=255)
cgccgGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTgcg < 1:1569446/140‑1 (MQ=255)
cgccgGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTgcg > 1:437633/1‑140 (MQ=255)
gccgGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTgcac > 2:1790711/1‑138 (MQ=255)
gccgGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGAGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTgcgc > 2:222262/1‑140 (MQ=255)
cgGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCa < 1:1709/140‑1 (MQ=255)
gTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGt > 2:1540391/1‑140 (MQ=255)
gTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGt < 1:1805391/140‑1 (MQ=255)
tGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGtt < 1:1717526/140‑1 (MQ=255)
tGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGtt < 1:1484287/140‑1 (MQ=255)
ttCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTggg < 2:437633/140‑1 (MQ=255)
cGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTc < 2:530916/140‑1 (MQ=255)
ccGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATc < 2:561516/140‑1 (MQ=255)
gCTTCCCCCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTg < 2:1393339/140‑1 (MQ=255)
gCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTg < 1:227644/140‑1 (MQ=255)
gCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTg < 1:1878195/140‑1 (MQ=255)
gCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTg > 2:1763516/1‑140 (MQ=255)
gCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTg < 1:1835890/140‑1 (MQ=255)
ccAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCa < 2:1368374/140‑1 (MQ=255)
aGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATa < 1:148760/140‑1 (MQ=255)
aGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCACCAGTTGGGTCATCTGACGTTCCATa < 1:1790711/140‑1 (MQ=255)
gCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATAc > 2:876101/1‑140 (MQ=255)
gCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATAc > 1:143728/1‑140 (MQ=255)
cGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTg > 1:178849/1‑128 (MQ=255)
cGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTg < 2:178849/128‑1 (MQ=255)
cGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATAcc > 1:593233/1‑140 (MQ=255)
cGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATAcc > 1:1933624/1‑140 (MQ=255)
cGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATAcc < 2:1512050/140‑1 (MQ=255)
atcatcTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCttt > 2:1351090/1‑140 (MQ=255)
atcTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTg < 2:1040454/140‑1 (MQ=255)
atcTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTg < 1:492681/140‑1 (MQ=255)
tcTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGa < 2:1210991/140‑1 (MQ=255)
tcTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGa > 2:1311918/1‑140 (MQ=255)
cTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGAt < 1:320093/140‑1 (MQ=255)
tGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATc > 1:314796/1‑140 (MQ=255)
ggCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCg > 1:1207167/1‑140 (MQ=255)
acaGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGGCGTTCCATACCGTCTTTCTGATCGTTa < 2:196945/140‑1 (MQ=255)
aGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAATCTACGTCTGTCAGCCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTaaa > 2:433788/1‑140 (MQ=255)
aGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTaaa > 2:1928667/1‑140 (MQ=255)
aaTGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAacc > 2:697875/1‑140 (MQ=255)
aaTGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAacc > 1:472858/1‑140 (MQ=255)
aaTGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAacc > 1:47490/1‑140 (MQ=255)
aTGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAacca < 2:472858/140‑1 (MQ=255)
aTGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAacca < 1:697875/140‑1 (MQ=255)
tGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAaccac < 1:476740/140‑1 (MQ=255)
gcggAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGc < 2:1410157/140‑1 (MQ=255)
gcggAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGc < 1:581359/140‑1 (MQ=255)
aaGTATTCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTTACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGa > 2:833588/1‑140 (MQ=255)
tCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGaa < 1:1591021/140‑1 (MQ=255)
tCGTGACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGaa < 2:265052/140‑1 (MQ=255)
gACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGc > 2:1549470/1‑140 (MQ=255)
gACGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGc > 1:1759536/1‑140 (MQ=255)
cGGGTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAt > 1:1557329/1‑140 (MQ=255)
gggTGTATGACAGGAAGGTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAtt > 2:266525/1‑140 (MQ=255)
gggTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAtt > 2:1873894/1‑140 (MQ=255)
gggTGTATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAtt > 2:329942/1‑140 (MQ=255)
gtgtATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCAtttt > 1:629955/1‑140 (MQ=255)
tgtATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTg > 1:878570/1‑140 (MQ=255)
tgtATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTg < 1:1351090/140‑1 (MQ=255)
tATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGcc < 2:1287162/140‑1 (MQ=255)
tATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGcc < 1:442377/140‑1 (MQ=255)
tATGACAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGcc < 1:1549470/140‑1 (MQ=255)
tATGACAGGAAGCTACGTCTGTCAGTCAACATAGCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGcc < 1:1162014/140‑1 (MQ=255)
cAGGAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGCCCGGCa > 2:1642480/1‑140 (MQ=255)
gAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGCCCGGCATAc > 1:670418/1‑140 (MQ=255)
gAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGCCCGGCATAc > 1:1779705/1‑140 (MQ=255)
gAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGCCCGGCATAc > 2:625512/1‑140 (MQ=255)
gAAGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGCCCGGCATAc > 2:823219/1‑140 (MQ=255)
aGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGCCCGGCATACCt > 2:1785993/1‑140 (MQ=255)
aGCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGCCCGGCATACCt > 2:751461/1‑140 (MQ=255)
gCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGCCCGGCATACCtt < 2:47490/140‑1 (MQ=255)
gCTACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGCCCGGCATACCtt < 1:1642480/140‑1 (MQ=255)
tACGTCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGCCCGGCATACCTTCg > 2:1119598/1‑140 (MQ=255)
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TTAAAGCAAATATTTTTCACCATCTCGCCCAGCAGGTTGATGTCCGCCGGTGCTTCGCCCGCTTCCACCCAGCGACCGATCATCTGGCACAGAATGCGGCGGAAGTATTCGTGACGGGTGTATGACAGGAAGCTACGGCTGTCAGTCAGCATACCGACAAAGCGGCTCAGCAGACCGAGCTGCGCCAGTTGGGTCATCTGACGTTCCATACCGTCTTTCTGATCGTTAAACCACCAGCCGGAACCGAACTGCATTTTGCCCGGCATACCTTCG > NC_000913/3243366‑3243638
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
