Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F73 I1 R1
|
27 |
211.6 |
7358776 |
99.3% |
7307264 |
139.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,238,222 |
C→T |
R304R (CGC→CGT) |
ygjR → |
putative oxidoreductase YgjR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,238,222 | 0 | C | T | 99.7%
| 1148.2
/ ‑5.0
| 328 | R304R (CGC→CGT) | ygjR | putative oxidoreductase YgjR |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (202/125); total (203/125) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.79e-01 |
Only 100 of 337 total aligned reads displayed.
TGCTTCGTGCCGCGTGGCAGCCAAATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGT > NC_000913/3238085‑3238354
|
tgCTTCGTGCCGCGTGGCAGCCAAATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTAt > 1:3296718/1‑140 (MQ=255)
gTGCCGCGTGGCAGCCAAATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGc > 2:3179177/1‑140 (MQ=255)
cgTGGCAGCC‑AATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAActg > 2:1333580/1‑140 (MQ=255)
gTGGCAGCCAAATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAActg > 2:2548510/1‑140 (MQ=255)
gATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATccgccg > 1:2354541/1‑140 (MQ=255)
cACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGa > 1:1546580/1‑140 (MQ=255)
aCCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGGTGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGAc > 2:2880333/1‑140 (MQ=255)
aCCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGAc > 1:2211640/1‑140 (MQ=255)
aCCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGAc < 2:1773395/140‑1 (MQ=255)
cccAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACt < 2:672933/140‑1 (MQ=255)
ccAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTg > 1:3148807/1‑140 (MQ=255)
aGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTggg > 1:955575/1‑140 (MQ=255)
aGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTggg > 1:3200817/1‑140 (MQ=255)
ccGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACTGAGATCCGCCGCCAGACTGGGGt > 1:3178765/1‑140 (MQ=255)
ccGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCAGCCGCCAGACTGGGGt > 1:2734962/1‑140 (MQ=255)
atatTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGAttttt < 1:1637906/140‑1 (MQ=255)
ttAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCg > 2:3347380/1‑140 (MQ=255)
aCCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGa < 2:1598132/140‑1 (MQ=255)
aCCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGa < 2:1181402/140‑1 (MQ=255)
aCCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGa < 1:3639113/140‑1 (MQ=255)
ccATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGAt > 2:844088/1‑140 (MQ=255)
aTGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAg > 1:860394/1‑140 (MQ=255)
aTGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAg > 2:2454524/1‑140 (MQ=255)
aTGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAg > 2:2792410/1‑140 (MQ=255)
tGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGAttt > 1:1730574/1‑126 (MQ=255)
tGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGc > 2:2164856/1‑140 (MQ=255)
tGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGc > 2:153669/1‑140 (MQ=255)
tGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGc > 1:3628008/1‑140 (MQ=255)
tGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGc > 1:50271/1‑140 (MQ=255)
tGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGc > 2:1829531/1‑140 (MQ=255)
tGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGc > 2:1504559/1‑140 (MQ=255)
tGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGc > 1:896279/1‑140 (MQ=255)
tGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGc > 2:774516/1‑140 (MQ=255)
tGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGc > 2:3556736/1‑140 (MQ=255)
tGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGc > 1:2554504/1‑140 (MQ=255)
tGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGc > 1:2658276/1‑140 (MQ=255)
tGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGc > 1:1008448/1‑140 (MQ=255)
gCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCg > 2:2694173/1‑140 (MQ=255)
gCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCg > 1:3476901/1‑140 (MQ=255)
gCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCg > 2:2333971/1‑140 (MQ=255)
gCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCg > 1:585455/1‑140 (MQ=255)
gCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCg < 1:1214044/140‑1 (MQ=255)
ctctACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGt < 1:3347380/140‑1 (MQ=255)
tACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCa < 1:3269127/129‑1 (MQ=255)
aCGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTaaaa < 2:3085653/140‑1 (MQ=255)
cGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAAc > 1:398166/1‑140 (MQ=255)
cGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAAc > 1:1949603/1‑140 (MQ=255)
aGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACtat > 1:537692/1‑140 (MQ=255)
agCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTg > 1:3568421/1‑140 (MQ=255)
agCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTg > 2:2837283/1‑140 (MQ=255)
gCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGc < 2:2415493/140‑1 (MQ=255)
gCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGc < 2:3260564/140‑1 (MQ=255)
gCTGTTCGCTACCCTGGTGGATGAGCATCGGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGc < 2:401216/140‑1 (MQ=255)
tGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCa < 2:3272205/140‑1 (MQ=255)
ttCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCaaa > 1:2938227/1‑140 (MQ=255)
ttCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCaaa > 2:1661273/1‑140 (MQ=255)
ttCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCaaa > 1:747978/1‑140 (MQ=255)
tACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTaaa < 1:2856498/140‑1 (MQ=255)
cccTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAAc < 2:949573/140‑1 (MQ=255)
cccTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAAc < 1:2333971/140‑1 (MQ=255)
cTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAg < 2:3200817/140‑1 (MQ=255)
tggtggATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAgt > 1:3236283/1‑140 (MQ=255)
gtggATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGc > 1:1666967/1‑124 (MQ=255)
gtggATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAgtgt > 1:2040702/1‑140 (MQ=255)
gtggATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAgtgt > 1:2706977/1‑140 (MQ=255)
gtggACGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAgtgt > 1:1023409/1‑140 (MQ=255)
tggATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTa < 1:2124478/140‑1 (MQ=255)
gATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTaaa < 1:2454524/140‑1 (MQ=255)
aGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGt < 1:1289717/140‑1 (MQ=255)
aGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGt < 2:2587780/140‑1 (MQ=255)
gCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTa < 2:3589638/140‑1 (MQ=255)
gCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTa < 1:808911/140‑1 (MQ=255)
aTCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAAc > 1:307595/1‑125 (MQ=255)
aTCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATg < 1:2588637/140‑1 (MQ=255)
aTCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATg > 1:1529121/1‑140 (MQ=255)
tggtggATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTaa > 1:2516300/1‑140 (MQ=255)
ggtggATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAAc < 2:272546/140‑1 (MQ=255)
gATCATCCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGAc < 2:3669216/140‑1 (MQ=255)
atcCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCAtt < 2:537692/140‑1 (MQ=255)
tcCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTg > 2:918817/1‑140 (MQ=255)
tcCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTg > 1:3452478/1‑140 (MQ=255)
tcCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTg > 2:1896234/1‑140 (MQ=255)
tcCAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTg > 2:1258297/1‑140 (MQ=255)
cAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGAc > 2:3039749/1‑140 (MQ=255)
cAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGAc < 1:108211/140‑1 (MQ=255)
cAGGGCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGAc < 1:2973759/140‑1 (MQ=255)
ggCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTgg > 1:1917178/1‑140 (MQ=255)
ggCTGGCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTgg > 2:34352/1‑140 (MQ=255)
cTGGCGGTCAGTCGTATCACCGCCAAGCTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCt < 1:927435/140‑1 (MQ=255)
ggCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGa < 1:2164856/140‑1 (MQ=255)
ggCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGa < 2:3628008/140‑1 (MQ=255)
ggCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGa < 2:2042933/140‑1 (MQ=255)
gCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGaa > 2:1009234/1‑140 (MQ=255)
gCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGaa > 2:1718201/1‑140 (MQ=255)
gCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGaa > 2:315708/1‑140 (MQ=255)
gCGGTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGaa > 1:1326935/1‑140 (MQ=255)
ggTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATg < 2:1037301/140‑1 (MQ=255)
ggTCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATg < 1:2785245/140‑1 (MQ=255)
tCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGt < 2:2950189/140‑1 (MQ=255)
tCAGTCGTATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGt < 2:2354541/140‑1 (MQ=255)
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TGCTTCGTGCCGCGTGGCAGCCAAATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTCGCTACCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACCGAGATCCGCCGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGT > NC_000913/3238085‑3238354
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
