Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F73 I1 R1 22 108.2 3720756 99.3% 3694710 138.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,781,948 G→T G205G (GGC→GGA)  cysE ← serine acetyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,781,9480GT100.0% 212.6 / NA 61G205G (GGC→GGA) cysEserine acetyltransferase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (21/40);  total (21/40)

ATCGCTGTCTGGTTTACCGACAATACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCGCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGTTTTCAATCACCGCCGTTTCACCAACGAC  >  NC_000913/3781813‑3782076
                                                                                                                                       |                                                                                                                                
aTCGCTGTCTGGTTTACCGACAATACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCCCCGGGTGGCGCACCACGGAAACTGCGCCCATCTTCGCGCCGCGCCCCACTTCAATATTTCCGAGGATTTTtgctcccc                                                                                                                              >  2:1816746/1‑139 (MQ=255)
aTCGCTGTCTGGTTTACCGACAATACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTcgctcccg                                                                                                                              <  2:1570730/140‑1 (MQ=255)
  cGCTGTCTGGTTTACCGACAATACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTcgctcccgcg                                                                                                                            <  1:482683/140‑1 (MQ=255)
  cGCTGTCTGGTTTACCGACAATACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTcgctcccgcg                                                                                                                            <  1:197890/140‑1 (MQ=255)
  cGCTGTCTGGTTTACCGACAATACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTcgctcccgcg                                                                                                                            <  1:1804142/140‑1 (MQ=255)
     tGTCTGGTTTACCGACAATACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCa                                                                                                                         <  2:14487/140‑1 (MQ=255)
     tGTCTGGTTTACCGACAATACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCa                                                                                                                         <  1:201836/140‑1 (MQ=255)
       tCTGGTTTACCGACAATACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAat                                                                                                                       >  1:1051596/1‑140 (MQ=255)
         tGGTTTACCGACAATACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAatca                                                                                                                     <  1:130415/140‑1 (MQ=255)
           gTTTACCGACAATACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAatcatc                                                                                                                   <  2:273845/140‑1 (MQ=255)
                ccGACAATACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACAcc                                                                                                              <  1:1315008/140‑1 (MQ=255)
                 cGACAATACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCt                                                                                                             >  2:38894/1‑140 (MQ=255)
                 cGACAATACGAGCCGGAACGCCAGCGGCGGTGGGATGCGGCGGCACCGGTTGCAGCACCACGGGACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCCCTCCCGCGCCAATCATCAccccc                                                                                                             >  2:367632/1‑139 (MQ=255)
                     aaTACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCAc                                                                                                         >  2:92096/1‑140 (MQ=255)
                     aaTACGAGCCGGAACGCCAGCGGCGGTGGGATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCAc                                                                                                         >  2:1323438/1‑140 (MQ=255)
                      aTACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACg                                                                                                        <  2:1220875/140‑1 (MQ=255)
                             ccGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTc                                                                                                 <  2:1016944/140‑1 (MQ=255)
                               ggAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCCCACCGTCACGAATTTTCgg                                                                                               <  2:1421829/140‑1 (MQ=255)
                               ggAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCgg                                                                                               >  2:1556734/1‑140 (MQ=255)
                                gAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCggg                                                                                              <  2:633233/140‑1 (MQ=255)
                                  aCGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATA‑TGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGa                                                                                           <  2:1098117/140‑1 (MQ=255)
                                   cGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGa                                                                                           <  2:1255962/140‑1 (MQ=255)
                                   cGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGa                                                                                           <  2:1192333/140‑1 (MQ=255)
                                      cAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACgg                                                                                        >  2:13116/1‑140 (MQ=255)
                                      cAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACgg                                                                                        <  1:1180081/140‑1 (MQ=255)
                                       aGCGGCGGTGGTATGCGGCGGCACTGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGt                                                                                       <  1:1755492/140‑1 (MQ=255)
                                       aGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGt                                                                                       <  1:19370/140‑1 (MQ=255)
                                       aGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGt                                                                                       <  1:38894/140‑1 (MQ=255)
                                       aGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGt                                                                                       <  2:374686/140‑1 (MQ=255)
                                       aGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGt                                                                                       <  2:423472/140‑1 (MQ=255)
                                             ggtggtATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTcaccac                                                                                 <  1:92096/140‑1 (MQ=255)
                                                 gtATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGa                                                                             <  1:13116/140‑1 (MQ=255)
                                                     gcggcgGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTa                                                                         >  2:752446/1‑140 (MQ=255)
                                                         cggcACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCg                                                                     >  2:440694/1‑140 (MQ=255)
                                                                 gTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCa                                                             <  2:467571/140‑1 (MQ=255)
                                                                  ttGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCaa                                                            <  2:221321/140‑1 (MQ=255)
                                                                   tGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAg                                                           <  1:1331146/140‑1 (MQ=255)
                                                                     cagcaCCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCg                                                         <  2:1821173/140‑1 (MQ=255)
                                                                     cagcaCCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCg                                                         <  2:1051596/140‑1 (MQ=255)
                                                                         accacGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTcac                                                     <  1:453417/140‑1 (MQ=255)
                                                                          ccacGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTGCCGCCAAGCGTcaca                                                    <  1:752446/140‑1 (MQ=255)
                                                                          ccacGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTcaca                                                    <  2:1183701/140‑1 (MQ=255)
                                                                          ccacGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTcaca                                                    <  1:1816746/140‑1 (MQ=255)
                                                                           cacGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGcc                                                              >  2:1467657/1‑129 (MQ=255)
                                                                           cacGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAg                                                   >  2:1011299/1‑140 (MQ=255)
                                                                           cacGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAg                                                   >  2:1673484/1‑140 (MQ=255)
                                                                           cacGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATAGTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGcc                                                              <  1:1467657/129‑1 (MQ=255)
                                                                             cGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTcac                                                     <  1:1331331/136‑1 (MQ=255)
                                                                             cGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTcac                                                     >  2:1331331/1‑136 (MQ=255)
                                                                             cGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGAt                                                 >  1:1374834/1‑140 (MQ=255)
                                                                             cGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGAt                                                 >  1:1689023/1‑140 (MQ=255)
                                                                              ggAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGcc                                                              >  1:766926/1‑126 (MQ=255)
                                                                              ggAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGcc                                                              <  2:766926/126‑1 (MQ=255)
                                                                               gccgatGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTTCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTg                                               >  1:457133/6‑140 (MQ=255)
                                                                               gAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTg                                               <  2:38241/140‑1 (MQ=255)
                                                                                 aCCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCa                                             <  1:1673484/140‑1 (MQ=255)
                                                                                   cTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGa                                           <  1:1141439/140‑1 (MQ=255)
                                                                                     gcgcCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAAt                                         >  1:720810/1‑140 (MQ=255)
                                                                                          aaTCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATa                                    >  1:1189943/1‑140 (MQ=255)
                                                                                            tCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATAcg                                  <  1:1556734/140‑1 (MQ=255)
                                                                                            tCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATAcg                                  <  1:560697/140‑1 (MQ=255)
                                                                                                  cgccgcgccCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGttt                            >  2:1392427/1‑140 (MQ=255)
                                                                                                   gccgcgccCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGtttt                           <  2:1189943/140‑1 (MQ=255)
                                                                                                     cgcgccCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATc                                        <  2:1185665/125‑1 (MQ=255)
                                                                                                     cgcgccCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATc                                        >  1:1185665/1‑125 (MQ=255)
                                                                                                       cgccCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGTTTTCAAt                       >  1:1357834/1‑140 (MQ=255)
                                                                                                       cgccCAACTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGTTTTCAAt                       >  2:614931/1‑140 (MQ=255)
                                                                                                            aaCTTCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCCCCCCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGTTTTCAATCAccg                  <  2:1503197/140‑1 (MQ=255)
                                                                                                                tCAATATTGCCGAGGTTTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCCCCCCCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGTTTTCAATCACCGCCGt              <  1:535070/140‑1 (MQ=255)
                                                                                                                tCAATATTGCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGTTTTCAATCACCGCCGt              <  2:720810/140‑1 (MQ=255)
                                                                                                                        gCCGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGTTTTCAATCACCGCCGTTTCACCaa      >  1:1010294/1‑140 (MQ=255)
                                                                                                                         ccGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGTTTTCAATCACCGCCGTTTCACCAac     >  1:232103/1‑140 (MQ=255)
                                                                                                                         ccGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGTTTTCAATCACCGCCGTTTCACCAac     >  2:659263/1‑140 (MQ=255)
                                                                                                                         ccGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGTTTTCAATCACCGCCGTTTCACCAac     >  2:496305/1‑140 (MQ=255)
                                                                                                                         ccGAGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGTTTTCAATCACCGCCGTTTCACCAac     >  1:951488/1‑140 (MQ=255)
                                                                                                                            aGGTTTTTCGCCCCCGCGCCAATCACCACCCCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCACGCGTCACAGATTGCAGAATCGATCCGTCTTTTTCAATCACCGCCGTTTCACCAacgac  <  1:614931/140‑1 (MQ=255)
                                                                                                                            aGGATTTTCGCTCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGTTTTCAATCACCGCCGTTTCACCAacgac  >  1:832663/1‑140 (MQ=255)
                                                                                                                                       |                                                                                                                                
ATCGCTGTCTGGTTTACCGACAATACGAGCCGGAACGCCAGCGGCGGTGGTATGCGGCGGCACCGGTTGCAGCACCACGGAACCTGCGCCAATCTTCGCGCCGCGCCCAACTTCAATATTGCCGAGGATTTTCGCGCCCGCGCCAATCATCACACCTTCACGAATTTTCGGGTGACGGTCACCACCAGATTTACCCGTACCGCCAAGCGTCACAGATTGCAGAATCGATACGTCGTTTTCAATCACCGCCGTTTCACCAACGAC  >  NC_000913/3781813‑3782076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A