Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F73 I1 R1
|
26 |
148.5 |
5206078 |
99.3% |
5169635 |
139.1 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,984,095 |
C→A |
A10A (GCG→GCT) |
kduI ← |
5‑dehydro‑4‑deoxy‑D‑glucuronate isomerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,984,095 | 0 | C | A | 100.0%
| 829.5
/ NA
| 233 | A10A (GCG→GCT) | kduI | 5‑dehydro‑4‑deoxy‑D‑glucuronate isomerase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (98/135); total (98/135) |
Only 100 of 237 total aligned reads displayed.
TTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGCCCATGGGCTAGGGTTTTCAATT > NC_000913/2983959‑2984231
|
ttttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCa > 1:394848/1‑140 (MQ=255)
tttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCAc < 1:2248323/140‑1 (MQ=255)
tttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCAc < 2:1232103/140‑1 (MQ=255)
tttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCAc < 2:1115025/140‑1 (MQ=255)
ttAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACt < 1:925624/140‑1 (MQ=255)
aGTTATCGGCATAATGCCGCCAACAATAACTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACtgt < 1:1601258/140‑1 (MQ=255)
ttATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTgg < 1:2323059/140‑1 (MQ=255)
aTCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGAt > 2:1175381/1‑140 (MQ=255)
aTCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGAt < 1:2446903/140‑1 (MQ=255)
tCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATg < 2:828039/140‑1 (MQ=255)
ggCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGct < 1:785076/140‑1 (MQ=255)
gCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGctc < 1:1429895/140‑1 (MQ=255)
gCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGctc < 1:1080074/140‑1 (MQ=255)
gCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGctc < 1:2415332/140‑1 (MQ=255)
tGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCtt > 2:2514163/1‑140 (MQ=255)
tGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATACTCTGTCtt > 1:2296476/1‑140 (MQ=255)
ccAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGGGTGAGCACTGTGGATGCTCTGTCTTACGTc > 1:1456980/1‑140 (MQ=255)
ccAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTc < 2:584743/140‑1 (MQ=255)
ccAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTc > 1:1241160/1‑140 (MQ=255)
ccAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTc > 1:2183572/1‑140 (MQ=255)
ccAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTc > 2:1826662/1‑140 (MQ=255)
ccAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTc > 2:2140900/1‑140 (MQ=255)
aataatTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACAt < 2:86042/140‑1 (MQ=255)
atTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTGCGTCCACACCAAc < 2:1338068/140‑1 (MQ=255)
atTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAAc < 1:1826662/140‑1 (MQ=255)
tCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCg > 1:1156959/1‑139 (MQ=255)
tCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGa > 2:2375923/1‑140 (MQ=255)
cAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGAt < 1:2042546/140‑1 (MQ=255)
aTGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATaa < 1:1683263/140‑1 (MQ=255)
tAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAg > 1:221145/1‑140 (MQ=255)
aaCCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCg > 2:2233915/1‑140 (MQ=255)
tGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGaaa > 1:890748/1‑140 (MQ=255)
tGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGaaa > 1:1260415/1‑140 (MQ=255)
ggTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGaaaa > 1:862768/1‑140 (MQ=255)
tgtACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATa > 1:2361468/1‑140 (MQ=255)
tgtACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATa > 1:583043/1‑140 (MQ=255)
tACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGa > 1:2154213/1‑140 (MQ=255)
tACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGa > 2:2349411/1‑140 (MQ=255)
cTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGaa > 2:758832/1‑139 (MQ=255)
tCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGTGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGaaaa < 2:1936803/140‑1 (MQ=255)
cATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCGGTGAAGCGTGAAAATAGAAAAc < 1:461815/140‑1 (MQ=255)
aTCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACg > 1:1041607/1‑140 (MQ=255)
tCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGGGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGa < 2:1456980/140‑1 (MQ=255)
tCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGa > 2:2601746/1‑140 (MQ=255)
tCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGa < 1:703728/140‑1 (MQ=255)
tCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGa < 2:1836618/140‑1 (MQ=255)
tCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGa < 1:1923497/140‑1 (MQ=255)
tCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGa < 2:280518/140‑1 (MQ=255)
cGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGAt > 1:64690/1‑140 (MQ=255)
ggCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCTACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATa > 1:329144/1‑140 (MQ=255)
ggCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGaaaa < 2:2549391/128‑1 (MQ=255)
ggCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAAc < 1:850297/136‑1 (MQ=255)
cGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGt > 2:549549/1‑140 (MQ=255)
aCAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGa > 1:2138520/1‑140 (MQ=255)
aaaTACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGaaa < 2:1885630/140‑1 (MQ=255)
aTACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAaca < 1:2272106/140‑1 (MQ=255)
tACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAacac < 1:726500/140‑1 (MQ=255)
aCCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACt < 1:2375923/140‑1 (MQ=255)
cTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGt > 1:1836895/1‑140 (MQ=255)
cTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGt > 1:2464468/1‑140 (MQ=255)
tCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGTTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCg > 2:560025/1‑140 (MQ=255)
ccAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGtttt < 2:66799/140‑1 (MQ=255)
ccAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGtttt < 2:208932/140‑1 (MQ=255)
aaaaaTTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTtct < 2:2501148/140‑1 (MQ=255)
aaaaTTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTtctc < 2:1311200/140‑1 (MQ=255)
aTTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCtat < 1:2512829/140‑1 (MQ=255)
ttCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCtata < 2:1041607/140‑1 (MQ=255)
ttCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCtata < 2:890748/140‑1 (MQ=255)
tCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATaa < 1:2479837/140‑1 (MQ=255)
tCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATaa < 2:221145/140‑1 (MQ=255)
aTTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCtata > 2:1694595/1‑137 (MQ=255)
ttGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAgg < 2:1260415/140‑1 (MQ=255)
ttGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAgg < 1:1586822/140‑1 (MQ=255)
tGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAggg < 2:580015/140‑1 (MQ=255)
tGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAggg < 2:919507/140‑1 (MQ=255)
aGCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGgatgat < 2:43224/140‑1 (MQ=255)
gCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGata < 2:1756256/140‑1 (MQ=255)
gCCCTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGata < 1:1883382/140‑1 (MQ=255)
cccTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGatat < 2:1637560/140‑1 (MQ=255)
cccTTGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGatat < 1:626294/140‑1 (MQ=255)
tGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGTTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGccc < 1:560025/140‑1 (MQ=255)
tGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGccc < 2:329144/140‑1 (MQ=255)
tGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGccc < 1:1754906/140‑1 (MQ=255)
tGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGccc < 1:274064/140‑1 (MQ=255)
tGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGccc < 2:2154213/140‑1 (MQ=255)
tGGGTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGccc < 1:549549/140‑1 (MQ=255)
gggTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGCCCa < 2:2455804/140‑1 (MQ=255)
gggTATCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGCCCa < 1:1718562/140‑1 (MQ=255)
tCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGccc > 1:1328469/1‑134 (MQ=255)
tCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGCCCATGGGc > 1:440728/1‑140 (MQ=255)
tCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGCCCATGGGc > 1:2529312/1‑140 (MQ=255)
tCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGCCCATGGGc > 2:1591874/1‑140 (MQ=255)
tCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGCCCATGGGc > 1:1193080/1‑140 (MQ=255)
tCCAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGCCCATGGGc > 1:1095605/1‑140 (MQ=255)
ccAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGccc < 1:1541512/133‑1 (MQ=255)
cAGCGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGCCCATGGGCTa < 1:573476/140‑1 (MQ=255)
cGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGCCCATGGGCTAggg > 2:2422286/1‑140 (MQ=255)
cGTTTTTGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGCCCATGGGCTAggg > 2:1526372/1‑140 (MQ=255)
ttGCGTGAGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGCCCATGGGCTAGGGTTTTc > 1:1057322/1‑140 (MQ=255)
gtgagCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGCCCATGGGCTAGGGTTTTCAAtt < 2:440728/140‑1 (MQ=255)
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TTTTAGTTATCGGCATAATGCCGCCAACAATAATTCGGTCAATGTGGCTGTAAACCATGGTGTACTCATCGGCGACAAATACCTTTTCAACCAAAAATTCATTGCGCAGCCCTTGGGTATCCAGCGTTTTTGCGTGCGCACTGTGGATGCTCTGTCTTACGTCCACATCAACCTCCGATAATCAGTGAAGCGTGAAAATAGAAAACGATAGTGAAACACTGTTTCGTTTTCTCTATAAAGGGATGATATGCCCATGGGCTAGGGTTTTCAATT > NC_000913/2983959‑2984231
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
