Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F73 I1 R1 33 77.0 2636344 99.1% 2612616 139.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,131,593 C→A H587N (CAC→AAC)  metL → fused aspartate kinase/homoserine dehydrogenase 2

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,131,5930CA100.0% 315.1 / NA 89H587N (CAC→AAC) metLfused aspartate kinase/homoserine dehydrogenase 2
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (46/43);  total (46/43)

TGATTTAGTGGTGCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCCACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGATCTTCTCCG  >  NC_000913/4131457‑4131728
                                                                                                                                        |                                                                                                                                       
tgatTTAGTGGTGCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAacg                                                                                                                                      >  1:1163348/1‑140 (MQ=255)
 gatTTAGTGGTGCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAacga                                                                                                                                     <  1:882166/140‑1 (MQ=255)
  atTTAGTGGTGCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAacgac                                                                                                                                    >  1:1218550/1‑140 (MQ=255)
  atTTAGTGGTGCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAacgac                                                                                                                                    >  1:935287/1‑140 (MQ=255)
  atTTAGTGGTGCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAacgac                                                                                                                                    >  1:479437/1‑140 (MQ=255)
   tttAGTGGTGCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTCCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAacgacg                                                                                                                                   >  2:289114/1‑140 (MQ=255)
     tAGTGGTGCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGGCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGcc                                                                                                                                 <  2:155799/140‑1 (MQ=255)
           tgCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGaa                                                                                                                           <  1:69360/140‑1 (MQ=255)
            gCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGaaa                                                                                                                          >  2:1291536/1‑140 (MQ=255)
            gCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGaaa                                                                                                                          >  2:1200795/1‑140 (MQ=255)
            gCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGaaa                                                                                                                          >  1:974930/1‑140 (MQ=255)
             cTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGaaaa                                                                                                                         >  2:814094/1‑140 (MQ=255)
             cTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGaaaa                                                                                                                         >  2:679386/1‑140 (MQ=255)
             cTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGaaaa                                                                                                                         >  2:589369/1‑140 (MQ=255)
             cTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGaaaa                                                                                                                         >  2:897701/1‑140 (MQ=255)
                  cGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCg                                                                                                                    >  1:1069903/1‑140 (MQ=255)
                   gTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCgg                                                                                                                   <  1:679386/140‑1 (MQ=255)
                    ttACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCggg                                                                                                                  >  1:676508/1‑140 (MQ=255)
                     tACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGc                                                                                                                 >  2:1255088/1‑140 (MQ=255)
                     tACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGc                                                                                                                 >  2:524386/1‑140 (MQ=255)
                      aCCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCg                                                                                                                >  1:675472/1‑140 (MQ=255)
                        cGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTc                                                                                                              <  2:1218550/140‑1 (MQ=255)
                         gccagccaGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCa                                                                                                             <  1:1255088/140‑1 (MQ=255)
                         gccagccaGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCa                                                                                                             <  1:792513/140‑1 (MQ=255)
                         gccagccaGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCa                                                                                                             <  2:974930/140‑1 (MQ=255)
                         gccagccaGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCa                                                                                                             <  2:757634/140‑1 (MQ=255)
                          ccagccagCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCAc                                                                                                            <  1:524386/140‑1 (MQ=255)
                          ccagccagCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCAc                                                                                                            >  2:1289111/1‑140 (MQ=255)
                          ccagccagCAGCTTGCTGATCAGTATCTTGATTCCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCAc                                                                                                            <  1:289114/140‑1 (MQ=255)
                           cagccagcAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACt                                                                                                           <  1:1106567/140‑1 (MQ=255)
                            agccagcAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTg                                                                                                          >  2:282374/1‑140 (MQ=255)
                             gccagcAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTgg                                                                                                         <  2:499311/140‑1 (MQ=255)
                             gccagcAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTgg                                                                                                         <  1:527919/140‑1 (MQ=255)
                                          tGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCa                                                                                            >  1:35839/1‑140 (MQ=255)
                                              cAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGt                                                                                        <  2:754112/140‑1 (MQ=255)
                                                 tATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCgg                                                                                     >  1:62059/1‑140 (MQ=255)
                                                  aTCTTGATTTCGCCTGCCACGGTTGCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCggg                                                                                    >  2:792396/1‑139 (MQ=255)
                                                   tCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTg                                                                                   >  1:781507/1‑140 (MQ=255)
                                                    cTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGc                                                                                  >  1:180634/1‑140 (MQ=255)
                                                     ttGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCg                                                                                 <  2:235193/140‑1 (MQ=255)
                                                     ttGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCg                                                                                 <  1:897701/140‑1 (MQ=255)
                                                      tGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCgg                                                                                >  2:1129092/1‑140 (MQ=255)
                                                      tGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCgg                                                                                >  1:987593/1‑140 (MQ=255)
                                                      tGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCgg                                                                                >  1:226714/1‑140 (MQ=255)
                                                        aTTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGc                                                                              >  1:835884/1‑140 (MQ=255)
                                                        aTTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGc                                                                              >  2:1080106/1‑140 (MQ=255)
                                                         tttCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCt                                                                             <  2:1069903/140‑1 (MQ=255)
                                                         tttCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCt                                                                             <  1:589369/140‑1 (MQ=255)
                                                           tCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGCCGCCCTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTg                                                                           >  2:970687/1‑140 (MQ=255)
                                                           tCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTg                                                                           >  1:931972/1‑140 (MQ=255)
                                                           tCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTg                                                                           >  2:191204/1‑140 (MQ=255)
                                                           tCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTg                                                                           <  2:180634/140‑1 (MQ=255)
                                                            cGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGc                                                                          >  2:1253107/1‑140 (MQ=255)
                                                              ccagccaCGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCg                                                                        <  1:1200795/140‑1 (MQ=255)
                                                              ccagccaCGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCg                                                                        <  2:987593/140‑1 (MQ=255)
                                                               cagccaCGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGa                                                                       <  2:33426/140‑1 (MQ=255)
                                                                agccaCGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGAt                                                                      <  1:635540/140‑1 (MQ=255)
                                                                agccaCGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGAt                                                                      <  2:781507/140‑1 (MQ=255)
                                                                agccaCGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGAt                                                                      <  1:1253107/140‑1 (MQ=255)
                                                                agccaCGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGAt                                                                      <  1:886/140‑1 (MQ=255)
                                                                agccaCGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGAt                                                                      <  1:1080106/140‑1 (MQ=255)
                                                                    aCGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAAc                                                                  <  2:226714/140‑1 (MQ=255)
                                                                         ttCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCacac                                                             <  2:675472/140‑1 (MQ=255)
                                                                         ttCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCacac                                                             <  2:935287/140‑1 (MQ=255)
                                                                              cGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTgc                                                        <  2:1279683/140‑1 (MQ=255)
                                                                              cGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTgc                                                        <  1:191204/140‑1 (MQ=255)
                                                                                  aTCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGa                                                    >  2:977366/1‑140 (MQ=255)
                                                                                  aTCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGa                                                    >  1:219163/1‑140 (MQ=255)
                                                                                  aTCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCGTGCCGATCAACCACACCGTGCGCGa                                                    >  2:1041819/1‑140 (MQ=255)
                                                                                      gcgcCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTg                                                >  1:1038643/1‑140 (MQ=255)
                                                                                          caacaaACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCg                                            >  1:1046929/1‑140 (MQ=255)
                                                                                            acaaACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGAc                                          >  2:1266428/1‑140 (MQ=255)
                                                                                             caaACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACa                                         >  1:572078/1‑140 (MQ=255)
                                                                                                 cTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAgcgg                                     <  1:282374/140‑1 (MQ=255)
                                                                                                    gCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGa                                  <  1:1289111/140‑1 (MQ=255)
                                                                                                     cGGGAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGAt                                 >  2:710372/1‑140 (MQ=255)
                                                                                                      gggAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAgcgg                                     <  1:865639/135‑1 (MQ=255)
                                                                                                      gggAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAgcgg                                     >  2:865639/1‑135 (MQ=255)
                                                                                                      gggAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATa                                >  2:580808/1‑140 (MQ=255)
                                                                                                        gAGCCAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACt                              <  1:1129092/140‑1 (MQ=255)
                                                                                                           ccAGCGACAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTAtt                           <  1:970687/140‑1 (MQ=255)
                                                                                                                 aCAGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCg                     <  2:35839/140‑1 (MQ=255)
                                                                                                                   aGCAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGAt                   <  2:1163348/140‑1 (MQ=255)
                                                                                                                     cAATAAATATCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCa                 <  1:977366/140‑1 (MQ=255)
                                                                                                                            tatCGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGAt          <  1:1041819/140‑1 (MQ=255)
                                                                                                                               cGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCa                 >  2:41313/1‑130 (MQ=255)
                                                                                                                               cGCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCa                 <  1:41313/130‑1 (MQ=255)
                                                                                                                                gCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGAtcttc      >  1:829868/1‑140 (MQ=255)
                                                                                                                                gCCAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGAtcttc      >  1:702779/1‑140 (MQ=255)
                                                                                                                                 ccAGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGAtcttct     >  2:1011445/1‑140 (MQ=255)
                                                                                                                                   aGATCAACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCTCCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTA‑TTTGTCGATCAGCGGGATCTTCTCCg  <  2:1238038/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                       
TGATTTAGTGGTGCTGGACGTTACCGCCAGCCAGCAGCTTGCTGATCAGTATCTTGATTTCGCCAGCCACGGTTTCCACGTTATCAGCGCCAACAAACTGGCGGGAGCCAGCGACAGCAATAAATATCGCCAGATCCACGACGCCTTCGAAAAAACCGGGCGTCACTGGCTGTACAATGCCACCGTCGGTGCGGGCTTGCCGATCAACCACACCGTGCGCGATCTGATCGACAGCGGCGATACTATTTTGTCGATCAGCGGGATCTTCTCCG  >  NC_000913/4131457‑4131728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A