Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A6 F28 I1 R1	132	61.4	2079690	99.1%	2060972	139.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,977,601	G→A	E335K (GAG→AAG)	galR →	DNA‑binding transcriptional dual regulator GalR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,977,601	0	G	A	100.0%	207.9 / NA	60	E335K (GAG→AAG)	galR	DNA‑binding transcriptional dual regulator GalR
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (28/32); total (28/32)

TACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGG  >  NC_000913/2977466‑2977736

tACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGc                                                                                                                                     <  2:68471/140‑1 (MQ=255)

  cccAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTAGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCaa                                                                                                                                   >  1:163873/1‑140 (MQ=255)

     aaTCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGtc                                                                                                                                >  1:108464/1‑140 (MQ=255)

     aaTCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGtc                                                                                                                                <  2:872742/140‑1 (MQ=255)

     aaTCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGtc                                                                                                                                <  1:255836/140‑1 (MQ=255)

     aaTCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGtc                                                                                                                                <  2:294466/140‑1 (MQ=255)

          tGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTcatcat                                                                                                                           >  2:940595/1‑140 (MQ=255)

           gACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATg                                                                                                                          <  1:710159/140‑1 (MQ=255)

           gACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATg                                                                                                                          <  1:654647/140‑1 (MQ=255)

            aCGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGc                                                                                                                         >  2:726894/1‑140 (MQ=255)

               aTGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAAc                                                                                                                      <  1:424824/140‑1 (MQ=255)

                tGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAAcc                                                                                                                     >  2:431647/1‑140 (MQ=255)

                  gCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCACCTCCGTCGCTGAAGGCAAGTCATCATGCAACCAg                                                                                                                   <  1:259240/140‑1 (MQ=255)

                  gCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAg                                                                                                                   <  2:951945/140‑1 (MQ=255)

                            cTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCg                                                                                                         <  2:108464/140‑1 (MQ=255)

                              gCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCa                                                                                                       <  1:280684/140‑1 (MQ=255)

                               ccGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAg                                                                                                      >  2:602552/1‑140 (MQ=255)

                                cGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGt                                                                                                     >  1:471620/1‑140 (MQ=255)

                                       gCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCa                                                                                              <  2:794582/140‑1 (MQ=255)

                                            ggCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTcc                                                                                         >  1:589237/1‑140 (MQ=255)

                                               gcTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAgc                                                                                      <  2:556666/140‑1 (MQ=255)

                                                 tGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAgcgc                                                                                    >  2:106873/1‑140 (MQ=255)

                                                     ggATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGt                                                                                <  1:726894/140‑1 (MQ=255)

                                                               ccTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGa                                                                      <  1:534888/140‑1 (MQ=255)

                                                               ccTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGa                                                                      <  1:607200/140‑1 (MQ=255)

                                                                ctctCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGAt                                                                     >  1:732932/1‑140 (MQ=255)

                                                                ctctCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGAt                                                                     >  1:215368/1‑140 (MQ=255)

                                                                       ggAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGAAATTCTTCGATGGTCTgg                                                              <  2:603754/140‑1 (MQ=255)

                                                                           aTCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGAc                                                          <  2:732932/140‑1 (MQ=255)

                                                                             cACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACgg                                                        >  2:873293/1‑140 (MQ=255)

                                                                             cACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACgg                                                        >  2:80827/1‑140 (MQ=255)

                                                                             cACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACgg                                                        >  2:762275/1‑140 (MQ=255)

                                                                             cACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACgg                                                        >  1:568586/1‑140 (MQ=255)

                                                                                      cTTTAGTCCGACGCTGGTACGTCGCCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAAc                                               <  2:163873/140‑1 (MQ=255)

                                                                                           gTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCgcgc                                          <  2:281132/140‑1 (MQ=255)

                                                                                            tCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGcc                                         >  1:404184/1‑140 (MQ=255)

                                                                                            tCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGcc                                         <  1:106873/140‑1 (MQ=255)

                                                                                                aCGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGGGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGAc                                     >  2:221857/1‑140 (MQ=255)

                                                                                                aCGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGAc                                     >  2:653568/1‑140 (MQ=255)

                                                                                                aCGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGAc                                     >  2:679155/1‑140 (MQ=255)

                                                                                                aCGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGAc                                     <  1:189849/140‑1 (MQ=255)

                                                                                                aCGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGAc                                     >  2:30395/1‑140 (MQ=255)

                                                                                                 cGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGAcc                                    >  1:497463/1‑140 (MQ=255)

                                                                                                  gCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCa                                   <  1:270705/140‑1 (MQ=255)

                                                                                                      gTACGTCGTCATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTAt                               >  1:177455/1‑140 (MQ=255)

                                                                                                             gtcATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAg                        <  2:215368/140‑1 (MQ=255)

                                                                                                              tcATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGa                       >  2:239596/1‑140 (MQ=255)

                                                                                                              tcATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGa                       >  2:119751/1‑140 (MQ=255)

                                                                                                              tcATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGa                       >  1:469009/1‑140 (MQ=255)

                                                                                                               cATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGaa                      <  2:474581/140‑1 (MQ=255)

                                                                                                               cATTCAGTGTCAACTCCGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGaa                      <  2:471620/140‑1 (MQ=255)

                                                                                                                              ccGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCg       <  1:108586/140‑1 (MQ=255)

                                                                                                                               cGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCgg      <  2:1008783/140‑1 (MQ=255)

                                                                                                                               cGTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCgg      <  1:873293/140‑1 (MQ=255)

                                                                                                                                gTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGa     >  1:715422/1‑140 (MQ=255)

                                                                                                                                gTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGa     >  2:296116/1‑140 (MQ=255)

                                                                                                                                gTCGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGa     >  1:617898/1‑140 (MQ=255)

                                                                                                                                  cGCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACg   <  2:1019016/140‑1 (MQ=255)

                                                                                                                                   gCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACgg  <  1:792112/140‑1 (MQ=255)

                                                                                                                                   gCTGAAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACgg  <  1:780883/140‑1 (MQ=255)

TACCCAATCGTGACGATGGCGACCCAGGCTGCCGAACTGGCTTTGGCGCTGGCGGATAATCGCCCTCTCCCGGAAATCACTAATGTCTTTAGTCCGACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGG  >  NC_000913/2977466‑2977736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A