Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F28 I1 R1 120 97.0 3206026 99.3% 3183583 140.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,210,343 T→C L415P (CTG→CCG)  yehQ → SWIM zinc finger domains‑containing protein YehQ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,210,3430TC100.0% 193.1 / NA 52L415P (CTG→CCG) yehQSWIM zinc finger domains‑containing protein YehQ
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (15/37);  total (15/37)

TTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCTGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGC  >  NC_000913/2210209‑2210475
                                                                                                                                      |                                                                                                                                    
ttCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGt                                                                                                                                 >  1:826901/1‑140 (MQ=255)
   gcgcAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAg                                                                                                                              <  2:753393/140‑1 (MQ=255)
        gTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTAcc                                                                                                                         >  1:69798/1‑140 (MQ=255)
            gCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCa                                                                                                                     <  1:1563357/140‑1 (MQ=255)
              cgcgAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAAc                                                                                                                   <  1:659767/140‑1 (MQ=255)
              cgcgAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAAc                                                                                                                   <  1:1513508/140‑1 (MQ=255)
                 gAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGc                                                                                                                <  1:1228755/140‑1 (MQ=255)
                 gAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGc                                                                                                                <  1:721778/140‑1 (MQ=255)
                 gAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGc                                                                                                                <  2:302840/140‑1 (MQ=255)
                   aGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCCACCGcct                                                                                                              >  2:261063/1‑138 (MQ=255)
                      gAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAag                                                                                                           <  2:209055/140‑1 (MQ=255)
                      gAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAag                                                                                                           <  2:175000/140‑1 (MQ=255)
                            gAAACCTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGt                                                                                                     <  2:1372203/140‑1 (MQ=255)
                             aaaaCTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGtt                                                                                                    >  1:900350/1‑140 (MQ=255)
                                aCTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGTAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTtgtg                                                                                                 <  2:1177406/140‑1 (MQ=255)
                                aCTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTtgtg                                                                                                 <  1:599529/140‑1 (MQ=255)
                                aCTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTtgtg                                                                                                 <  1:809535/140‑1 (MQ=255)
                                 cTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGc                                                                                                <  2:342095/140‑1 (MQ=255)
                                   ccccGGCAGGTGCCAGTCGGCTGTTTGGTTTTCGGGCCGGCGTCCTGGGGGGCGGGAAAATTGTTTCACAAGCAGGAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTTCCCGCAAACGCTTAAGCAGCGTTGTGCCg                                                                                              <  2:886384/138‑1 (MQ=255)
                                   cACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCg                                                                                              >  1:159307/1‑140 (MQ=255)
                                   cACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCg                                                                                              <  2:1324038/140‑1 (MQ=255)
                                     ccGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCt                                                                                            <  2:52496/140‑1 (MQ=255)
                                              aCGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGa                                                                                   <  1:1514330/140‑1 (MQ=255)
                                                gcgTCGGCTGTTTAGTTTGCAGGCTGGCGCACGGGCGGGCGGGCAAATTGTTTCACAGGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATg                                                                                 <  2:9780/140‑1 (MQ=255)
                                                 cgTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGc                                                                                <  2:840703/140‑1 (MQ=255)
                                                      gCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTggg                                                                           >  1:833100/1‑139 (MQ=255)
                                                      gCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGc                                                                           >  2:775098/1‑140 (MQ=255)
                                                                 ttCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAgg                                                                >  2:391817/1‑139 (MQ=255)
                                                                  tCAGGCTGGGGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAgcg                                                               <  1:346007/140‑1 (MQ=255)
                                                                  tCAGGCTGGCGGAATGGTGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAgcg                                                               <  2:739526/140‑1 (MQ=255)
                                                                  tCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAgcg                                                               <  1:136528/140‑1 (MQ=255)
                                                                   cAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGGCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAgcgc                                                              <  2:1189265/140‑1 (MQ=255)
                                                                                  gcgggcggGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCCATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGcc                                               >  2:67956/1‑140 (MQ=255)
                                                                                   cgggcgggCAAATTGTTTCACAAGCAGCAAAGCGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCg                                              <  2:733589/140‑1 (MQ=255)
                                                                                    gggcgggcAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCgg                                             >  1:1113419/1‑140 (MQ=255)
                                                                                     ggcgggcAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCggg                                            <  2:1429841/140‑1 (MQ=255)
                                                                                          gtaaaTTGTTTCGCAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATtg                                       >  1:1505904/3‑140 (MQ=255)
                                                                                          gcAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATtg                                       >  2:193023/1‑140 (MQ=255)
                                                                                          gcAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATtg                                       >  1:1441070/1‑140 (MQ=255)
                                                                                             aaTTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTgg                                    <  2:826901/140‑1 (MQ=255)
                                                                                                  tttCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTg                               <  1:1482339/140‑1 (MQ=255)
                                                                                                  tttCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTg                               <  2:1126828/140‑1 (MQ=255)
                                                                                                  tttCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTg                               <  2:972214/140‑1 (MQ=255)
                                                                                                   ttCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGc                              <  1:775098/140‑1 (MQ=255)
                                                                                                       caAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGa                          <  2:376685/140‑1 (MQ=255)
                                                                                                       caAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGa                          <  2:525569/140‑1 (MQ=255)
                                                                                                       caAGCAGCAAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGa                          <  1:736267/140‑1 (MQ=255)
                                                                                                             gcaAAACGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATAttt                    >  1:1556796/1‑140 (MQ=255)
                                                                                                                 aaCGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGc                <  1:1554249/140‑1 (MQ=255)
                                                                                                                  aCGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGcc               <  1:444009/140‑1 (MQ=255)
                                                                                                                   cGCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCa              <  2:1441070/140‑1 (MQ=255)
                                                                                                                    gCAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAg             >  2:1099064/1‑140 (MQ=255)
                                                                                                                     cAGTGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGc            <  1:1421074/140‑1 (MQ=255)
                                                                                                                        tGCCGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTc         >  1:829608/1‑140 (MQ=255)
                                                                                                                          ccGATGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTccc       <  1:67956/140‑1 (MQ=255)
                                                                                                                            gagggCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGAAAATGTTGGGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTccccc     <  2:1166011/137‑1 (MQ=255)
                                                                                                                             aTGGCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTcccccc    >  2:1503830/1‑140 (MQ=255)
                                                                                                                               ggCGAGCCGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGc  <  2:618182/140‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                    
TTCGCGCAGTTGGCCGCGAAGTGAACAGGAAAACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGCGGGCAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCTGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGTGCCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGC  >  NC_000913/2210209‑2210475

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A