Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F28 I1 R1
|
162 |
93.0 |
3098984 |
99.0% |
3067994 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,360,148 |
A→G |
L254P (CTG→CCG) |
puuA ← |
glutamate‑putrescine ligase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,360,148 | 0 | A | G | 100.0%
| 256.9
/ NA
| 71 | L254P (CTG→CCG) | puuA | glutamate‑putrescine ligase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (35/36); total (35/36) |
CCGCGTCAGAAAGCACGTTCTCGCCACGATTATTTTGCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCAGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCAT > NC_000913/1360011‑1360283
|
ccGCGTCAGAAAGCACGTTCTCGCCACGATTATTTTGCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCggg > 2:605543/1‑140 (MQ=255)
cgcgTCAGAAAGCACGTTCTCGCCACGATTATTTTGCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGc < 1:1315566/140‑1 (MQ=255)
cgTCAGAAAGCACGTTCTCGCCACGATTATTTTGCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGt > 1:665514/1‑140 (MQ=255)
aaaGCACGTTCTCGCCACGATTATTTTGCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATACAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGt > 1:483449/1‑140 (MQ=255)
aaaGCACGTTCTCGCCACGATTATTTTGCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGt < 1:643762/140‑1 (MQ=255)
aaaGCACGTTCTCGCCACGATTATTTTGCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGt > 1:1237497/1‑140 (MQ=255)
aGCACGTTCTCGCCACGATTATTTTGCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGc < 2:704754/140‑1 (MQ=255)
aCGTTCTCGCCACGATTATTTTGCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAg < 1:1196568/140‑1 (MQ=255)
aCGTTCTCGCCACGATTATTTTGCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAg < 1:340517/140‑1 (MQ=255)
tctcGCCACGATTATTTTGCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGca > 2:419105/1‑140 (MQ=255)
tctcGCCACGATTATTTTGCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCCTATGCTCTTCTGCCATCAGACCCACCGGGCGTTTTAGTGCCAGCGca > 2:778832/1‑140 (MQ=255)
tattTTGCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCt > 2:492426/1‑140 (MQ=255)
gCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGc < 1:658994/140‑1 (MQ=255)
gCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGc < 2:62947/140‑1 (MQ=255)
gCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGc < 1:1136474/140‑1 (MQ=255)
gCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGc < 1:780697/140‑1 (MQ=255)
cATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCa > 2:149385/1‑140 (MQ=255)
cATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCa > 2:33606/1‑140 (MQ=255)
aTACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCTATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCAc < 1:605543/140‑1 (MQ=255)
aTACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCAc < 2:401321/140‑1 (MQ=255)
tACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACg > 1:550869/1‑140 (MQ=255)
cTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGtt < 2:104926/140‑1 (MQ=255)
tGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTa > 2:1522963/1‑140 (MQ=255)
gctatggatatgCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCACCCTATGCCTTTCTGCCATCAGACGCACCGGGCGTTTTGGTGCCAACGCACCATCGCAGGGTTCCAGCACCTTAt > 2:1022139/3‑140 (MQ=255)
gatatggatatgCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGGCATAAAAGGGGCGGGCCTCTTATGGTTTTCTGCCATCAGACGCCCCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTAt < 2:1261668/140‑1 (MQ=255)
gatatggatatgCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTAt < 1:725827/140‑1 (MQ=255)
gatatggatatgCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTAt < 1:768885/140‑1 (MQ=255)
gatatggatatgCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTAt < 2:507761/140‑1 (MQ=255)
gatatggatatgCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTAt < 2:294651/140‑1 (MQ=255)
gatatggatatgCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTAt < 1:1100090/140‑1 (MQ=255)
gatatggatatgCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTAt < 1:612254/140‑1 (MQ=255)
atatggatatgCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATc > 2:34893/1‑140 (MQ=255)
tggatatgCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCCGACGCCCCGGGCGTTTTAGGGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGt > 2:852420/1‑140 (MQ=255)
gatatgCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTAt < 2:440909/140‑1 (MQ=255)
atatgCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATg > 2:53925/1‑140 (MQ=255)
atatgCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATg > 2:800247/1‑140 (MQ=255)
atgCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCCTCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGt > 2:1199916/1‑140 (MQ=255)
gCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTaa > 1:619625/1‑140 (MQ=255)
gCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTaa > 2:374856/1‑140 (MQ=255)
tCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGGAAAGGt > 2:363774/1‑140 (MQ=255)
cGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTg > 1:1384423/1‑140 (MQ=255)
cccGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTc > 2:844962/1‑140 (MQ=255)
ctctTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGAc < 1:419105/140‑1 (MQ=255)
ctctTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGATTGATTTCAAACTGAc < 2:121010/140‑1 (MQ=255)
ctTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGAccc > 1:564208/1‑140 (MQ=255)
aTACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGCTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCg < 1:1383898/140‑1 (MQ=255)
aCGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGCCCCGGCGAg < 2:1384423/140‑1 (MQ=255)
gCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGcc > 1:891687/1‑140 (MQ=255)
cGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCCTCAGACGCACCGGGCGTTTTAGGGCCCGCGCATCATCGCGGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAg > 2:1213683/1‑140 (MQ=255)
cGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAg > 2:580679/1‑140 (MQ=255)
cGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAg > 1:1088715/1‑140 (MQ=255)
cGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAg > 1:55148/1‑140 (MQ=255)
cGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAg > 1:1083998/1‑140 (MQ=255)
gCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATc > 1:604764/1‑140 (MQ=255)
tGCATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGc > 1:644145/1‑140 (MQ=255)
gCATCTTATGCTTTTCTGCCCTCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGcc > 1:51244/1‑140 (MQ=255)
cATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCg > 2:640440/1‑140 (MQ=255)
cATCTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCg > 2:243298/1‑140 (MQ=255)
cTTATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGaa < 1:181919/140‑1 (MQ=255)
ttATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAAt < 1:53925/140‑1 (MQ=255)
tATGCTTTTCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATc < 1:374856/140‑1 (MQ=255)
tCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTaa < 2:891687/140‑1 (MQ=255)
tCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTaa > 1:220042/1‑140 (MQ=255)
tCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTaa > 1:199785/1‑140 (MQ=255)
tCTGCCATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTaa > 2:796568/1‑140 (MQ=255)
ccATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTgc > 1:382485/1‑140 (MQ=255)
cATCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTgcg < 1:1263250/140‑1 (MQ=255)
aTCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTgcgc < 1:345933/140‑1 (MQ=255)
aTCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTgcgc < 1:410324/140‑1 (MQ=255)
tCAGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGcc < 1:1522963/140‑1 (MQ=255)
aGACGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTACCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAg < 1:492426/140‑1 (MQ=255)
aCGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGtt < 2:644145/140‑1 (MQ=255)
aCGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGATAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGtt < 2:550869/140‑1 (MQ=255)
cGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtc < 1:33606/140‑1 (MQ=255)
cGCACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtc < 1:34893/140‑1 (MQ=255)
cACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGTCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtcat < 2:639982/140‑1 (MQ=255)
cACCGGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTtcat > 1:987785/1‑140 (MQ=255)
|
CCGCGTCAGAAAGCACGTTCTCGCCACGATTATTTTGCATACTGATATGGATATGCATTCCGCTGCCCGCGTGCTCTTCATACGGCTTCGCCATAAAAGTGGCGTGCATCTTATGCTTTTCTGCCATCAGACGCACCAGGCGTTTTAGTGCCAGCGCATCATCGCAGGCTTCCAGCACGTTATCAGTATGGTAAAGGTTGATTTCAAACTGACCCGGCGAGGCCTCAGCGACCGCGCCATCTGCCGGAATCAGCTGTAACTGCGCCAGTTCAT > NC_000913/1360011‑1360283
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
