Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A4 F28 I1 R1	162	93.0	3098984	99.0%	3067994	139.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,474,342	T→C	V41A (GTG→GCG)	pdxI →	pyridoxine 4‑dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,474,342	0	T	C	100.0%	257.8 / NA	70	V41A (GTG→GCG)	pdxI	pyridoxine 4‑dehydrogenase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (33/37); total (33/37)

GGGCAGGGTGCGATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACAATTGTCACTAAAATTGGT  >  NC_000913/1474209‑1474478

gggcagggTGCGATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGTGCTGCg                                                                                                                                    >  2:1110411/1‑140 (MQ=255)

 ggcagggTGCGATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCgg                                                                                                                                   >  1:711129/1‑139 (MQ=255)

   cagggTGCGATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGa                                                                                                                                 <  1:250582/140‑1 (MQ=255)

   cagggTGCGATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGa                                                                                                                                 >  2:563155/1‑140 (MQ=255)

   cagggTGCGATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTAGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGa                                                                                                                                 >  1:1194242/1‑140 (MQ=255)

    agggTGCGATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAg                                                                                                                                >  1:144860/1‑140 (MQ=255)

       gTGCGATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGgcg                                                                                                                             <  1:918787/140‑1 (MQ=255)

        tGCGATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGgcgc                                                                                                                            >  2:1178996/1‑140 (MQ=255)

             tGAGCAGCAATACATTTACTCTCGGCACAAAATTCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTACTGGGGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCa                                                                                                                       >  2:130988/1‑140 (MQ=255)

                 cagcaATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTgg                                                                                                                   >  2:61629/1‑140 (MQ=255)

                 cagcaATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGCTATGGCGCGATGCAACTGGCAGGCCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTgg                                                                                                                   >  2:198490/1‑140 (MQ=255)

                   gcaATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGc                                                                                                                 <  1:851706/140‑1 (MQ=255)

                   gcaATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGc                                                                                                                 <  1:1199864/140‑1 (MQ=255)

                   gcaATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGc                                                                                                                 <  1:507380/140‑1 (MQ=255)

                    caATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCg                                                                                                                >  2:646594/1‑140 (MQ=255)

                     aaTACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGt                                                                                                               <  1:400669/140‑1 (MQ=255)

                     aaTACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGt                                                                                                               <  2:92777/140‑1 (MQ=255)

                     aaTACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGt                                                                                                               <  2:1029130/140‑1 (MQ=255)

                     aaTACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGt                                                                                                               <  1:939339/140‑1 (MQ=255)

                        aCATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCaa                                                                                                            <  1:5549/140‑1 (MQ=255)

                         cATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAAt                                                                                                           <  1:263304/140‑1 (MQ=255)

                            ttACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCat                                                                                                        <  2:814727/140‑1 (MQ=255)

                              aCTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCatat                                                                                                      >  2:1413058/1‑140 (MQ=255)

                                 ctcGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGGTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGa                                                                                                   >  1:1121856/1‑140 (MQ=255)

                                    ggTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATAc                                                                                                >  2:247029/1‑140 (MQ=255)

                                        cAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGc                                                                                            <  2:347669/140‑1 (MQ=255)

                                          aaaTCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGa                                                                                          <  1:129449/140‑1 (MQ=255)

                                                gTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTa                                                                                    >  1:155054/1‑140 (MQ=255)

                                                  ttaCCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATg                                                                                  <  2:598679/138‑1 (MQ=255)

                                                   aaCCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATgg                                                                                 >  1:93827/1‑140 (MQ=255)

                                                       gttttGGTTATGGCGCGTTGCAACTGGCAGGTCCTGGAGTTTGTGGCCGCCCACGGGATCGCCACGTCTCTATCTCCGTGCTGCGTGAGGCTCTGGCATTGGGCGTCAACCATATTGATACCAGCGACTTTTATGGTCCg                                                                             <  2:53245/137‑1 (MQ=255)

                                                       gTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCg                                                                             <  2:287980/140‑1 (MQ=255)

                                                        tCTTGGTTATGGCGCGATGCAACTGACAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGc                                                                            >  1:575770/1‑140 (MQ=255)

                                                         cTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCa                                                                           <  2:817209/140‑1 (MQ=255)

                                                         cTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCa                                                                           <  2:33324/140‑1 (MQ=255)

                                                         cTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCa                                                                           >  2:514942/1‑140 (MQ=255)

                                                         cTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCa                                                                           >  2:596092/1‑140 (MQ=255)

                                                            ggTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGt                                                                        <  2:898285/140‑1 (MQ=255)

                                                             gTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTc                                                                       <  1:950471/140‑1 (MQ=255)

                                                             gTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTc                                                                       <  1:133785/140‑1 (MQ=255)

                                                             gTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTc                                                                       <  2:1457887/140‑1 (MQ=255)

                                                                  ggCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCaa                                                                  >  1:1094711/1‑140 (MQ=255)

                                                                  ggCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCaa                                                                  >  1:445102/1‑140 (MQ=255)

                                                                  ggCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCaa                                                                  >  2:619357/1‑140 (MQ=255)

                                                                       gATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCTCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGa                                                             >  2:820703/1‑140 (MQ=255)

                                                                       gATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGa                                                             >  2:117495/1‑140 (MQ=255)

                                                                                 gCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGa                                                   <  1:1110411/140‑1 (MQ=255)

                                                                                 gCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGa                                                   <  1:439876/140‑1 (MQ=255)

                                                                                   aGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAg                                                 <  2:1306500/140‑1 (MQ=255)

                                                                                   aGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAg                                                 >  2:422644/1‑140 (MQ=255)

                                                                                        cTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATGCCAGCGGCTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCtt                                            <  2:1121856/140‑1 (MQ=255)

                                                                                        cTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCtt                                            >  2:668081/1‑140 (MQ=255)

                                                                                        cTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCtt                                            <  1:1413058/140‑1 (MQ=255)

                                                                                        cTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCtt                                            <  2:575770/140‑1 (MQ=255)

                                                                                           gAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTAt                                         >  2:164811/1‑140 (MQ=255)

                                                                                               ttttGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCtt                                     >  1:975047/1‑140 (MQ=255)

                                                                                                tttGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTa                                    >  2:718462/1‑140 (MQ=255)

                                                                                                tttGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTa                                    >  2:601580/1‑140 (MQ=255)

                                                                                                tttGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTa                                    >  1:1502577/1‑140 (MQ=255)

                                                                                                tttGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTa                                    >  2:582465/1‑140 (MQ=255)

                                                                                                tttGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTa                                    >  1:638244/1‑140 (MQ=255)

                                                                                                tttGGCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTa                                    >  1:966446/1‑140 (MQ=255)

                                                                                                   ggCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATcc                                       <  1:1532531/134‑1 (MQ=255)

                                                                                                   ggCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATcc                                       >  2:1532531/1‑134 (MQ=255)

                                                                                                    gCCCCCCACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTActct                                <  1:1178996/140‑1 (MQ=255)

                                                                                                          cACGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTgacgac                          <  1:596092/140‑1 (MQ=255)

                                                                                                           aCGAGATCGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGAcc                         <  1:668081/140‑1 (MQ=255)

                                                                                                                  cGCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACAAt                  >  1:157052/1‑140 (MQ=255)

                                                                                                                   gCCACGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACAAtt                 <  1:989740/140‑1 (MQ=255)

                                                                                                                      ccGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACAATTGTc              <  1:130988/139‑1 (MQ=255)

                                                                                                                      aCGTCGCTATAACCTCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACAATTGTc              <  1:820703/140‑1 (MQ=255)

                                                                                                                      aCGTCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACAATTGTc              <  1:820577/140‑1 (MQ=255)

                                                                                                                         tCGCTATAACCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACAATTGTCACt           >  2:446766/1‑140 (MQ=255)

                                                                                                                                aaCCGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACAATTGTCACTAAAATTg    <  2:93827/140‑1 (MQ=255)

                                                                                                                                  ccGCGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACAATTGTCACTAAAATTGGt  <  1:164811/140‑1 (MQ=255)

GGGCAGGGTGCGATGAGCAGCAATACATTTACTCTCGGTACAAAATCCGTTAACCGTCTTGGTTATGGCGCGATGCAACTGGCAGGTCCTGGAGTTTTTGGCCCCCCACGAGATCGCCACGTCGCTATAACCGTGCTGCGTGAGGCGCTGGCATTGGGCGTCAATCATATTGATACCAGCGACTTTTATGGTCCGCACGTCACCAATCAGATTATCCGCGAAGCGCTTTATCCTTACTCTGACGACCTGACAATTGTCACTAAAATTGGT  >  NC_000913/1474209‑1474478

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A