Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A4 F28 I1 R1	162	93.0	3098984	99.0%	3067994	139.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,658,260	T→C	C64C (TGT→TGC)	ynfE →	putative selenate reductase YnfE

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,658,260	0	T	C	100.0%	216.4 / NA	59	C64C (TGT→TGC)	ynfE	putative selenate reductase YnfE
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (20/39); total (20/39)

CCGCGATAGGTTCTCTGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGTGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATCCGCCGGCGTATTAATCATCCCG  >  NC_000913/1658124‑1658396

ccGCGATAGGTTCTCTGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGGACAACAGGCCCGCGAAAAAGTGGTCTGGGGGGCCTGTTCCGTCAAATGTGGGAGCCGCTgcgcc                                                                                                                                       >  2:1493357/1‑139 (MQ=255)

 cgcgATAGGTTCTCTGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCAc                                                                                                                                      <  2:1480573/140‑1 (MQ=255)

  gcgATAGGTTCTCTGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACt                                                                                                                                     <  2:1263776/140‑1 (MQ=255)

  gcgATAGGTTCTCTGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACt                                                                                                                                     <  1:468683/140‑1 (MQ=255)

      tAGGTTCTCTGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGt                                                                                                                                 <  1:1160456/140‑1 (MQ=255)

        ggTTCTCTGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCt                                                                                                                               <  2:655911/140‑1 (MQ=255)

        ggTTCTCTGGCGCTGGCTGCAGGCGGCTTTTCTTTTCCGGTTACCCCGCGCAATTCAGCAGCAGCGGGACCACCCGCCCCCGAAAAAGGGGGCTGGGGGGCCCGTTCCGTCAACCTCGGTAGCCGCTGCGCGCTTCgcat                                                                                                                               >  2:869695/1‑137 (MQ=255)

         gTTCTCTGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAACGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTa                                                                                                                              <  2:1213442/140‑1 (MQ=255)

          ttCTCTGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTAc                                                                                                                             <  2:98615/140‑1 (MQ=255)

             tctGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATg                                                                                                                          <  2:723701/140‑1 (MQ=255)

               tGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGtt                                                                                                                        <  2:662456/140‑1 (MQ=255)

               tGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGtt                                                                                                                        <  2:1252701/140‑1 (MQ=255)

                 gcgcTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTaa                                                                                                                      <  2:1197509/140‑1 (MQ=255)

                  cgcTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTaaa                                                                                                                     <  2:1018550/140‑1 (MQ=255)

                       gctgCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATaa                                                                                                                <  2:1274328/140‑1 (MQ=255)

                         tgCAGGCGGTTTTTTTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGGACAACAGGCCCGCGAAAAAATGGTCTGGGGGGCCCGGTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATg                                                                                                              >  2:701441/1‑140 (MQ=255)

                           cAGGCGGTTTTTCTTTGCCGTTTACCCCGCGCAATGCAGCAGCAGCGGGACAACAGGCCCGCGGAAAAGTGGTCTGGGGGGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGaa                                                                                                            >  2:1472013/1‑140 (MQ=255)

                                 gTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGGACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGAcc                                                                                                      >  2:1068976/1‑140 (MQ=255)

                                        tttGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTgg                                                                                               <  1:135734/140‑1 (MQ=255)

                                          tGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGaa                                                                                             <  1:632769/140‑1 (MQ=255)

                                          tGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGaa                                                                                             <  1:393970/140‑1 (MQ=255)

                                            ccGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAAc                                                                                           >  2:1089782/1‑140 (MQ=255)

                                                   cccTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAAt                                                                                    <  2:426458/140‑1 (MQ=255)

                                                      tGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATAcc                                                                                 >  1:1185075/1‑140 (MQ=255)

                                                       gcgcAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCg                                                                                >  1:278721/1‑140 (MQ=255)

                                                         gcAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGc                                                                              >  1:293681/1‑140 (MQ=255)

                                                             tGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCg                                                                          >  2:105822/1‑140 (MQ=255)

                                                                cgccgccgcGGTACCACAGGCCCGCGAAAAAGTGGGCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATg                                                                       <  2:520180/133‑1 (MQ=255)

                                                                 gcagcagcGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGa                                                                      <  2:278721/140‑1 (MQ=255)

                                                                     cagcGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTAc                                                                  >  1:759338/1‑140 (MQ=255)

                                                                         ggTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCa                                                              <  1:869695/140‑1 (MQ=255)

                                                                             caacaGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCa                                                          <  1:1449404/140‑1 (MQ=255)

                                                                               acaGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATc                                                        >  1:667920/1‑140 (MQ=255)

                                                                               acaGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATc                                                        >  2:336414/1‑140 (MQ=255)

                                                                                  ggCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAgg                                                     >  1:1508998/1‑140 (MQ=255)

                                                                                   gCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGt                                                    <  1:1068976/140‑1 (MQ=255)

                                                                                   gCCCGCGAAAAAGCGGTCTGGGGTGCCTGTTACGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGAGGAAACTGACAATACCGGCCGCGGTGAGAACGGCAACCATCAgga                                                    >  2:56701/1‑139 (MQ=255)

                                                                                    cccGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTa                                                   <  2:960294/140‑1 (MQ=255)

                                                                                     ccGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTAc                                                  >  1:599856/1‑140 (MQ=255)

                                                                                     ccGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTAc                                                  >  1:43955/1‑140 (MQ=255)

                                                                                        cgAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTAcgcg                                               >  2:957252/1‑140 (MQ=255)

                                                                                             aaGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGt                                          >  2:66826/1‑140 (MQ=255)

                                                                                                  gTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTgcg                                     <  2:1215412/140‑1 (MQ=255)

                                                                                                   tCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTgcgc                                    <  1:344586/140‑1 (MQ=255)

                                                                                                     tGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCgg                                  >  1:992907/1‑140 (MQ=255)

                                                                                                      ggggTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGt                                 <  2:346223/140‑1 (MQ=255)

                                                                                                        ggTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCg                               <  1:633431/140‑1 (MQ=255)

                                                                                                        ggTGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCg                               <  2:759338/140‑1 (MQ=255)

                                                                                                          tGCCTGTTCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCt                             <  1:726679/140‑1 (MQ=255)

                                                                                                            ccTGTTCCGTCAACTGTGGTAGCCGCTGCGCGCTTCGTTTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTTACAATTCCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTcc                           <  2:997245/140‑1 (MQ=255)

                                                                                                                ttCCGTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATcc                       <  1:105822/140‑1 (MQ=255)

                                                                                                                    gTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATccgccg                   <  2:599856/140‑1 (MQ=255)

                                                                                                                    gTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATccgccg                   <  1:428492/140‑1 (MQ=255)

                                                                                                                    gTCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATccgccg                   <  1:701441/140‑1 (MQ=255)

                                                                                                                     tCAACTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATCCGCCgg                  >  1:565592/1‑140 (MQ=255)

                                                                                                                        aCTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATCCGCCGGCGt               >  1:1545719/1‑140 (MQ=255)

                                                                                                                        aCTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATCCGCCGGCGt               <  2:942007/140‑1 (MQ=255)

                                                                                                                        aCTGTGGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATCCGCCGGCGt               <  2:1185075/140‑1 (MQ=255)

                                                                                                                          tgtgGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATCCGCCGGCGTAt             >  1:422563/1‑140 (MQ=255)

                                                                                                                          tgtgGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATCCGCCGGCGTAt             <  1:1472013/140‑1 (MQ=255)

                                                                                                                            tgGTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATCCGCCGGCGTATTa           >  1:1316879/1‑140 (MQ=255)

                                                                                                                            gggTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATCCGCCGGCGTATTa           <  2:664146/139‑1 (MQ=255)

                                                                                                                             ggTAGCCGCTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATCCGCCGGCGTATTaa          >  1:1215949/1‑140 (MQ=255)

                                                                                                                                     cTGCGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATCCGCCGGCGTATTAATCATCCCg  <  1:553017/140‑1 (MQ=255)

CCGCGATAGGTTCTCTGGCGCTGGCTGCAGGCGGTTTTTCTTTGCCGTTTACCCTGCGCAATGCAGCAGCAGCGGTACAACAGGCCCGCGAAAAAGTGGTCTGGGGTGCCTGTTCCGTCAACTGTGGTAGCCGCTGTGCACTTCGTCTACATGTTAAAGATAATGAAGTGACCTGGGTGGAAACTGACAATACCGGCAGCGATGAGTACGGCAACCATCAGGTACGCGCCTGTTTGCGCGGTCGCTCCATCCGCCGGCGTATTAATCATCCCG  >  NC_000913/1658124‑1658396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A