Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F28 I1 R1 162 93.0 3098984 99.0% 3067994 139.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,661,914 T→C G453G (GGT→GGC)  ynfF → putative selenate reductase YnfF

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,661,9140TC100.0% 261.5 / NA 72G453G (GGT→GGC) ynfFputative selenate reductase YnfF
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (39/33);  total (39/33)

GGCGTACGCGAAGGTAGCTGGGATCTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGTGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAGCAAGTGCGAGATGA  >  NC_000913/1661777‑1662047
                                                                                                                                         |                                                                                                                                     
ggCGTACGCGAAGGTAGCTGGGATCTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGgcgt                                                                                                                                     >  1:630028/1‑140 (MQ=255)
ggCGTACGCGAAGGTAGCTGGGATCTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGgcgt                                                                                                                                     >  1:1544003/1‑140 (MQ=255)
      cgcgAAGGTAGCTGGGATCTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTgg                                                                                                                               >  1:810864/1‑140 (MQ=255)
      cgcgAAGGTAGCTGGGATCTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTgg                                                                                                                               >  1:1141534/1‑140 (MQ=255)
               aGCTGGGATCTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGgaaaagaaaa                                                                                                                      >  1:1330889/1‑140 (MQ=255)
               aGCTGGGATCTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGgaaaagaaaa                                                                                                                      >  1:1356177/1‑140 (MQ=255)
                 cTGGGATCTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAAc                                                                                                                    >  2:1357337/1‑140 (MQ=255)
                 cTGGGATCTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAAc                                                                                                                    >  2:416865/1‑140 (MQ=255)
                    ggATCTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTgg                                                                                                                 <  1:132232/140‑1 (MQ=255)
                       tCTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATg                                                                                                              >  2:497027/1‑140 (MQ=255)
                       tCTGGGGGAAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGGGGAAAAGAAAAACTGGATg                                                                                                              >  2:956934/1‑140 (MQ=255)
                        cTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACAGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGt                                                                                                             >  1:1510576/1‑140 (MQ=255)
                           ggggTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTccc                                                                                                          >  1:366884/1‑140 (MQ=255)
                              gTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCAt                                                                                                       <  2:1107676/140‑1 (MQ=255)
                                caaaTGGTACTAGATGCTCGAGAAACCTGTTCAAACGCAGATTTCCGTCTTTACATGGACAGCCGGCATAGGCCACGGTACGGAAATGACCGCGTCCCGTGATGGCGTTCGTAGAAAAGAAAATCTGGATGTcccttaaa                                                                                                     <  2:864402/138‑6 (MQ=255)
                                aGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCa                                                                                                     <  1:1311133/140‑1 (MQ=255)
                                aGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCa                                                                                                     >  1:315263/1‑140 (MQ=255)
                                  aaTGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAg                                                                                                   >  2:257049/1‑140 (MQ=255)
                                       ttCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGttttt                                                                                              >  2:576986/1‑140 (MQ=255)
                                        tCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTa                                                                                             <  2:336218/140‑1 (MQ=255)
                                         cccGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTAt                                                                                            <  2:921124/140‑1 (MQ=255)
                                         cccGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATAGCGTTCGTGGAAAAGAAGAACTGGATGTCCCCATCAAGTTTTTAt                                                                                            >  2:444143/1‑140 (MQ=255)
                                            gATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGt                                                                                         >  2:527750/1‑140 (MQ=255)
                                              tGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGc                                                                                       >  1:935740/1‑140 (MQ=255)
                                                 tCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTAc                                                                                    <  2:148909/140‑1 (MQ=255)
                                                 tCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTAc                                                                                    <  1:1244918/140‑1 (MQ=255)
                                                  cGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACg                                                                                   >  1:790457/1‑140 (MQ=255)
                                                  cGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACg                                                                                   <  1:1357337/140‑1 (MQ=255)
                                                       aTCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGt                                                                              <  2:317007/140‑1 (MQ=255)
                                                       aTCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGt                                                                              <  1:257049/140‑1 (MQ=255)
                                                       aTCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGt                                                                              <  1:721471/140‑1 (MQ=255)
                                                       aTCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGt                                                                              <  2:1050411/140‑1 (MQ=255)
                                                       aTCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGt                                                                              <  1:91172/140‑1 (MQ=255)
                                                        tCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTa                                                                                             <  2:1000395/124‑1 (MQ=255)
                                                        tCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTa                                                                                             >  1:1000395/1‑124 (MQ=255)
                                                          cTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAac                                                                           >  2:552416/1‑140 (MQ=255)
                                                           tGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAaca                                                                          >  2:953319/1‑140 (MQ=255)
                                                               aaaaCGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACAtt                                                                      <  1:467588/140‑1 (MQ=255)
                                                                    gCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGatca                                                                 >  1:495585/1‑140 (MQ=255)
                                                                     cAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGatcaa                                                                >  2:317821/1‑140 (MQ=255)
                                                                        aTTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGatcaatca                                                             <  2:1405308/140‑1 (MQ=255)
                                                                              gTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATgg                                                       <  1:416865/140‑1 (MQ=255)
                                                                              gTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATgg                                                       <  2:366884/140‑1 (MQ=255)
                                                                               tCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGc                                                      <  1:956934/140‑1 (MQ=255)
                                                                                  ttACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGAc                                                   <  1:576986/140‑1 (MQ=255)
                                                                                  ttACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGAc                                                   <  2:188199/140‑1 (MQ=255)
                                                                                    aCATGGACAGTTGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACat                                                 <  2:1544003/140‑1 (MQ=255)
                                                                                    aCATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACat                                                 <  2:630028/140‑1 (MQ=255)
                                                                                         gACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACatcaatc                                            <  2:790457/140‑1 (MQ=255)
                                                                                             gATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCacac                                        >  1:328550/1‑140 (MQ=255)
                                                                                              aTGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGCTGGCGTTCGTGGAAAAGAAACACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACAcc                                       >  1:84156/1‑140 (MQ=255)
                                                                                              aTGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACAcc                                       >  1:1115186/1‑140 (MQ=255)
                                                                                              aTGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACAcc                                       >  2:325523/1‑140 (MQ=255)
                                                                                              aTGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGATCGAGGAAAAGAAAAACTGGATGGCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACAcc                                       >  2:126851/1‑140 (MQ=255)
                                                                                              aTGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATAGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACAcc                                       >  1:914634/1‑140 (MQ=255)
                                                                                                gCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCa                                     >  1:1055922/1‑140 (MQ=255)
                                                                                                   aTCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGa                                  <  2:1356177/140‑1 (MQ=255)
                                                                                                    tCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAg                                 <  2:315263/140‑1 (MQ=255)
                                                                                                    tCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAg                                 >  1:1394523/1‑140 (MQ=255)
                                                                                                    tCGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAg                                 <  1:552416/140‑1 (MQ=255)
                                                                                                     cGACCATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAgg                                <  2:1330889/140‑1 (MQ=255)
                                                                                                        ccATGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGc                             <  2:810864/140‑1 (MQ=255)
                                                                                                           tGGTACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTc                          >  2:1451487/1‑140 (MQ=255)
                                                                                                              tACGGAAATGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAgg                       >  1:623606/1‑140 (MQ=255)
                                                                                                                     aTGACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAg                >  1:192486/1‑140 (MQ=255)
                                                                                                                       gACCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAGCa              >  2:101281/1‑140 (MQ=255)
                                                                                                                        aCCGCGACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAGCaa             >  2:1280741/1‑140 (MQ=255)
                                                                                                                           gcgACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAGCAAGTg          <  2:1141534/140‑1 (MQ=255)
                                                                                                                           gcgACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAGCAAGTg          <  1:527750/140‑1 (MQ=255)
                                                                                                                             gACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAGCAAGTGCg        >  1:998770/1‑140 (MQ=255)
                                                                                                                             gACCCGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAGCAAGTGCg        >  1:732890/1‑140 (MQ=255)
                                                                                                                               cccGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAGCAAGTGCgag      >  1:1412/1‑140 (MQ=255)
                                                                                                                               cccGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAGCAAGTGCgag      <  1:347133/140‑1 (MQ=255)
                                                                                                                                ccGTGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAGCAAGTGCgaga     <  2:495585/140‑1 (MQ=255)
                                                                                                                                   tGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAGCAAGTGCGAgatga  >  2:922856/1‑140 (MQ=255)
                                                                                                                                   tGATGGCGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATAAGGTGCTTCAGGATGACAGCAAGTGCGAgatga  >  2:774594/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                     
GGCGTACGCGAAGGTAGCTGGGATCTGGGGGTAGAATGGTTCCCGATGCTCGAGAATCCTGTTAAAACGCAGATTTCCGTCTTTACATGGACAGATGCCATCGACCATGGTACGGAAATGACCGCGACCCGTGATGGTGTTCGTGGAAAAGAAAAACTGGATGTCCCCATCAAGTTTTTATGGTGCTACGCCAGTAACACATTGATCAATCAACATGGCGACATCAATCACACCCATGAGGTGCTTCAGGATGACAGCAAGTGCGAGATGA  >  NC_000913/1661777‑1662047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A