Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A10 F28 I1 R1	126	72.5	2472046	99.4%	2457213	138.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	975,341	A→G	E341E (GAA→GAG)	mukF →	chromosome partitioning protein MukF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	975,341	0	A	G	100.0%	246.2 / NA	66	E341E (GAA→GAG)	mukF	chromosome partitioning protein MukF
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (32/34); total (32/34)

TGCTCAGCGGTTACGTCAGTCGGTACAAACCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAACTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGTCTGGTGGTACGCGAATATCTGT  >  NC_000913/975209‑975477

tGCTCAGCGGTTACGTCAGTCGGTACAATCCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTg                                                                                                                                   <  1:734511/140‑1 (MQ=255)

tGCTCAGCGGTTACGTCAGTCGGTACAAACCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTg                                                                                                                                   <  1:1032749/140‑1 (MQ=255)

tGCTCAGCGGTTACGTCAGTCGGTACAAACCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTg                                                                                                                                   <  1:401816/140‑1 (MQ=255)

   tCAGCGGTTACGTCAGTCGGTACAAACCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAgg                                                                                                                                <  1:972499/140‑1 (MQ=255)

       cGGTTACGTCAGTCGGTACAAACCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCt                                                                                                                            >  2:524936/1‑140 (MQ=255)

       cGGTTACGTCAGTCGGTACAAACCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCt                                                                                                                            >  2:478884/1‑140 (MQ=255)

          ttACGTCAGTCGGTACAAACCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGa                                                                                                                         >  1:1214999/1‑140 (MQ=255)

                cAGTCGGTACAAACCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGa                                                                                                                   <  2:104431/140‑1 (MQ=255)

                cAGTCGGTACAAACCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGa                                                                                                                   <  2:929905/140‑1 (MQ=255)

                 aGTCGGTACAAACCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGaa                                                                                                                  >  2:38882/1‑140 (MQ=255)

                     ggTACAAACCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGt                                                                                                              <  2:199372/140‑1 (MQ=255)

                                 ttttGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATcc                                                                                                  >  2:648671/1‑140 (MQ=255)

                                   ttGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCcgc                                                                                                >  1:533548/1‑140 (MQ=255)

                                      atgaGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGt                                                                                                              >  2:955397/1‑123 (MQ=255)

                                      atgaGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGt                                                                                                              <  1:955397/123‑1 (MQ=255)

                                        gaGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACga                                                                                                       <  2:7800/128‑1 (MQ=255)

                                        gaGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACga                                                                                                       >  1:7800/1‑128 (MQ=255)

                                        gaGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACa                                                                                           >  1:984889/1‑140 (MQ=255)

                                           ccGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCt                                                                                        >  2:713838/1‑140 (MQ=255)

                                                 gcgcTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTggcggc                                                                                  <  1:142454/140‑1 (MQ=255)

                                                    cTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGat                                                                               >  2:1183968/1‑140 (MQ=255)

                                                     tAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAg                                                                                          >  2:159003/1‑128 (MQ=255)

                                                     tAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAg                                                                                          <  1:159003/128‑1 (MQ=255)

                                                     tAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGatc                                                                              >  1:683617/1‑140 (MQ=255)

                                                     tAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGatc                                                                              >  1:173926/1‑140 (MQ=255)

                                                     tAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGatc                                                                              >  2:1039986/1‑140 (MQ=255)

                                                     tAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGatc                                                                              >  1:988232/1‑140 (MQ=255)

                                                          tATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCga                                                                         >  2:1008715/1‑140 (MQ=255)

                                                                 aTGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGTGGCGATCATCGAAGaacaa                                                                  >  1:277838/1‑140 (MQ=255)

                                                                 aTGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGatcat                                                                            <  1:703820/130‑1 (MQ=255)

                                                                 aTGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGatcat                                                                            >  2:703820/1‑130 (MQ=255)

                                                                 aTGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGat                                                                               >  1:181866/1‑127 (MQ=255)

                                                                 aTGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGat                                                                               <  2:181866/127‑1 (MQ=255)

                                                                 aTGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGaacaa                                                                  >  2:746640/1‑140 (MQ=255)

                                                                 aTGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGaacaa                                                                  >  2:286595/1‑140 (MQ=255)

                                                                  tGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGaacaac                                                                 <  1:943471/140‑1 (MQ=255)

                                                                   gCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACt                                                                <  1:38882/140‑1 (MQ=255)

                                                                     cGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTg                                                              <  1:478884/140‑1 (MQ=255)

                                                                     cGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTg                                                              <  2:1214999/140‑1 (MQ=255)

                                                                     cGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGAGATGAAGAAGTGACTGGGGAGCTTCCTGAGGACCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTg                                                              <  2:1147277/140‑1 (MQ=255)

                                                                       aTCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGTGGCGATCATCGAAGAACAACTTGcc                                                            <  2:277838/140‑1 (MQ=255)

                                                                       aTCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGcc                                                            >  2:662663/1‑140 (MQ=255)

                                                                       aTCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGcc                                                            <  1:524936/140‑1 (MQ=255)

                                                                       aTCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGcc                                                            <  1:1183968/140‑1 (MQ=255)

                                                                       aTCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACAGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGcc                                                            <  1:1074133/140‑1 (MQ=255)

                                                                               ctgGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACaa                                                    <  1:662663/140‑1 (MQ=255)

                                                                                 ggATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACaaaa                                                  <  1:746640/140‑1 (MQ=255)

                                                                                       gCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTAGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGAc                                            >  2:243222/1‑140 (MQ=255)

                                                                                            aCGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTg                                       >  1:289717/1‑140 (MQ=255)

                                                                                               aaGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCg                                    <  1:713838/140‑1 (MQ=255)

                                                                                                 gagaTGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCt                                  <  1:648671/140‑1 (MQ=255)

                                                                                                     tGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGAt                              <  2:208656/140‑1 (MQ=255)

                                                                                                     tGGCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGAt                              <  2:173926/140‑1 (MQ=255)

                                                                                                      ggCACTGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATc                             <  2:702425/140‑1 (MQ=255)

                                                                                                           tGCGCGATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGt                        >  1:422524/1‑140 (MQ=255)

                                                                                                             cgcgATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGa                               >  1:759768/1‑131 (MQ=255)

                                                                                                             cgcgATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGa                               <  2:759768/131‑1 (MQ=255)

                                                                                                             cgcgATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGTCt                      >  1:735840/1‑140 (MQ=255)

                                                                                                             cgcgATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGTCt                      >  2:383424/1‑140 (MQ=255)

                                                                                                             cgcgATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGTCt                      >  2:352642/1‑140 (MQ=255)

                                                                                                             cgcgATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGTCt                      >  2:945820/1‑140 (MQ=255)

                                                                                                                gATGAAGAAGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGTCtggt                   >  1:349345/1‑140 (MQ=255)

                                                                                                                   gaagaaGTGACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGTCTggtggt                <  2:988232/140‑1 (MQ=255)

                                                                                                                           gACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGTCTGGTGGTACGCGAat        <  2:683617/140‑1 (MQ=255)

                                                                                                                           gACTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGTCTGGTGGTACGCGAat        <  1:945820/140‑1 (MQ=255)

                                                                                                                            aCTGGGGAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGTCTGGTGGTACGCGAata       >  1:211054/1‑140 (MQ=255)

                                                                                                                                 ggAGCTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGTCTGGTGGTACGCGAATATCTGt  <  2:984889/140‑1 (MQ=255)

TGCTCAGCGGTTACGTCAGTCGGTACAAACCTATTTTGATGAGCCGTGGGCGCTAACTTATGCCAATGCCGATCGTCTGCTGGATATGCGTGACGAAGAGATGGCACTGCGCGATGAAGAAGTGACTGGGGAACTTCCTGAGGATCTGGAATACGAAGAGTTTAACGAGATCCGCGAACAGCTGGCGGCGATCATCGAAGAACAACTTGCCGTGTACAAAACCAGACAAGTGCCGCTGGATCTTGGTCTGGTGGTACGCGAATATCTGT  >  NC_000913/975209‑975477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A