Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F28 I1 R1
|
126 |
72.5 |
2472046 |
99.4% |
2457213 |
138.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,992,892 |
T→C |
Y267H (TAC→CAC) |
ygeH → |
putative transcriptional regulator YgeH |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,992,892 | 0 | T | C | 100.0%
| 438.7
/ NA
| 116 | Y267H (TAC→CAC) | ygeH | putative transcriptional regulator YgeH |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (66/50); total (66/50) |
Only 100 of 116 total aligned reads displayed.
TACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGCACT > NC_000913/2992756‑2993022
|
taCATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACg > 1:1205398/1‑140 (MQ=255)
taCATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACg > 1:164982/1‑140 (MQ=255)
aTCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACt > 2:45198/1‑140 (MQ=255)
aTCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACt > 1:633443/1‑140 (MQ=255)
aTCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAAACAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACt > 1:397025/1‑140 (MQ=255)
cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCAc < 2:635320/134‑1 (MQ=255)
cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCAc > 1:635320/1‑134 (MQ=255)
cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTc > 1:103508/1‑140 (MQ=255)
cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTc > 2:645/1‑140 (MQ=255)
cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTc > 2:622587/1‑140 (MQ=255)
cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTc > 2:353366/1‑140 (MQ=255)
cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTc > 2:1129396/1‑140 (MQ=255)
cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTc > 1:838269/1‑140 (MQ=255)
cacaATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTc > 1:804744/1‑140 (MQ=255)
caATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCAc < 2:164982/140‑1 (MQ=255)
aaTTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCAcc > 2:809219/1‑140 (MQ=255)
tttATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCAcccc > 2:1121594/1‑140 (MQ=255)
attatAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGa < 1:832315/140‑1 (MQ=255)
tataGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGaaa > 2:586655/1‑140 (MQ=255)
tataGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGaaa < 1:1121594/140‑1 (MQ=255)
taGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGc < 1:143881/140‑1 (MQ=255)
aGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCa > 1:932647/1‑140 (MQ=255)
ataataTCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACtt > 2:828205/1‑124 (MQ=255)
ataataTCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACtt < 1:828205/124‑1 (MQ=255)
ataataTCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCAtt > 1:1053894/1‑140 (MQ=255)
aataTCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTa > 1:988627/1‑140 (MQ=255)
aataTCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTa > 1:669135/1‑140 (MQ=255)
tatCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTAc > 2:922081/1‑139 (MQ=255)
tatCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTAc < 1:922081/139‑1 (MQ=255)
tatCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACa < 1:688170/140‑1 (MQ=255)
tatCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACa < 1:830754/140‑1 (MQ=255)
tatCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACa > 2:431175/1‑140 (MQ=255)
tCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAgg < 1:498063/140‑1 (MQ=255)
cTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGc < 2:932647/140‑1 (MQ=255)
cTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGc < 2:1205398/140‑1 (MQ=255)
cTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGc < 2:772685/140‑1 (MQ=255)
ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTa < 1:94606/133‑1 (MQ=255)
ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTa > 2:94606/1‑133 (MQ=255)
ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGcc > 2:1169296/1‑140 (MQ=255)
ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGcc > 1:584932/1‑140 (MQ=255)
ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGcc > 2:1073155/1‑140 (MQ=255)
ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGcc < 2:1053894/140‑1 (MQ=255)
ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGcc < 2:740428/140‑1 (MQ=255)
ttCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGcc < 2:103508/140‑1 (MQ=255)
tCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGa > 1:412532/1‑123 (MQ=255)
tCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCa > 2:336032/1‑140 (MQ=255)
tCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCa > 1:372525/1‑140 (MQ=255)
tCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCa > 1:179651/1‑140 (MQ=255)
tCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCa < 2:179651/140‑1 (MQ=255)
tCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCa > 1:428839/1‑140 (MQ=255)
cAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTAc < 2:1070579/132‑1 (MQ=255)
cAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTAc > 1:1070579/1‑132 (MQ=255)
cAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCAt < 1:250137/140‑1 (MQ=255)
aaCGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGa < 1:336032/140‑1 (MQ=255)
aaCGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGa < 1:1073155/140‑1 (MQ=255)
aaCGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGa < 2:430153/140‑1 (MQ=255)
aaCAGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGa < 2:309882/140‑1 (MQ=255)
cGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACt < 1:586655/140‑1 (MQ=255)
aCATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACa < 1:355704/125‑1 (MQ=255)
aCATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACa > 2:355704/1‑125 (MQ=255)
aCATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTatat > 1:746982/1‑140 (MQ=255)
aGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGAt > 1:781349/1‑140 (MQ=255)
aGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGAt > 2:1165120/1‑140 (MQ=255)
aaCGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTg > 1:244368/1‑132 (MQ=255)
aaCGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTg < 2:244368/132‑1 (MQ=255)
aaCGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTa > 2:387091/1‑140 (MQ=255)
aaCGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTa < 1:611252/140‑1 (MQ=255)
tCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACaaaa > 1:459559/1‑140 (MQ=255)
tCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACaaaa > 1:700221/1‑140 (MQ=255)
tCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACaaaa > 2:1049829/1‑140 (MQ=255)
cTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAAt < 1:1213942/140‑1 (MQ=255)
gTAAGATTAGCTAAGTAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATaa < 2:350629/140‑1 (MQ=255)
gTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATaa < 1:1129396/140‑1 (MQ=255)
gTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATaa < 1:809219/140‑1 (MQ=255)
tAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATaaa > 1:712805/1‑140 (MQ=255)
aaGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATaaaa < 1:45198/140‑1 (MQ=255)
aaGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATaaaa < 1:353366/140‑1 (MQ=255)
aTTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTg < 2:633443/140‑1 (MQ=255)
tAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGat > 2:577509/1‑140 (MQ=255)
gCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGatat > 2:877223/1‑140 (MQ=255)
gCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGatat > 2:708631/1‑140 (MQ=255)
cAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGAc > 1:815075/1‑140 (MQ=255)
gACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATaa > 1:29627/1‑122 (MQ=255)
gACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCt < 2:45774/140‑1 (MQ=255)
aGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTaaaaa > 2:1202460/1‑140 (MQ=255)
ataAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGaa > 2:824366/1‑140 (MQ=255)
tCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTaaaaa < 1:1037274/128‑1 (MQ=255)
tCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTaaaaa > 2:1037274/1‑128 (MQ=255)
tCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTAtt > 2:951187/1‑140 (MQ=255)
aTGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGaa > 2:577959/1‑140 (MQ=255)
aTGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGaa > 2:490865/1‑140 (MQ=255)
aTGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGaa < 1:203266/140‑1 (MQ=255)
aTGAAATGTTAGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGaa > 1:176587/1‑140 (MQ=255)
aGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGt > 2:725253/1‑140 (MQ=255)
aGCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGt > 2:123320/1‑140 (MQ=255)
gCCGGAAAGAAAGAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTc > 1:324520/1‑140 (MQ=255)
aaagaaagAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTgg < 2:176587/140‑1 (MQ=255)
aaagaaagAACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTgg > 1:507150/1‑140 (MQ=255)
aagaaagaACTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGc > 2:295182/1‑140 (MQ=255)
aaagaaCTTCACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGCACt > 2:956310/1‑140 (MQ=255)
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TACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAAACCAGAACGATCTGTAAGATTAGCTAAGCAGGACCAAGGATATAAGAATCATTATTTATCAGATGAAATGTTAGCCGGAAAGAAAGAACTTTACGACTTCACCCCTGAAAGCATTTACAGGGCCATGACTATATTTGATAGATTACAAAATAAAAGTGATATACAGACGCTAAAAACAGAATGTTATTGCCTTCTAGCGGAATGCCATATGTCTTTGGCACT > NC_000913/2992756‑2993022
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
