Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F28 I1 R1 108 95.2 3177646 99.2% 3152224 139.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,454,645 T→C V240A (GTT→GCT)  paaA → phenylacetyl‑CoA 1,2‑epoxidase, monooxygenase subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,454,6450TC100.0% 244.9 / NA 64V240A (GTT→GCT) paaAphenylacetyl‑CoA 1,2‑epoxidase, monooxygenase subunit
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (40/24);  total (40/24)

GTTCGGGCCAAACGATGATAACTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGTTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAGGAGAGGCTCGACGCCAAACGTAAAGCC  >  NC_000913/1454508‑1454781
                                                                                                                                         |                                                                                                                                        
gTTCGGGCCAAACGATGATAACTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTc                                                                                                                                        >  2:909636/1‑140 (MQ=255)
gTTCGGGCCAAACGATGATAACTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTc                                                                                                                                        >  2:1439479/1‑140 (MQ=255)
gTTCGGGCCAAACGATGATAACTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGGTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTc                                                                                                                                        >  1:1546234/1‑140 (MQ=255)
 ttCGGGCCAAACGATGATAACTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTcc                                                                                                                                       >  2:555106/1‑140 (MQ=255)
   cGGGCCAAACGATGATAACTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTg                                                                                                                                     >  2:979088/1‑140 (MQ=255)
    gggCCAAACGATGATAACTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGa                                                                                                                                    >  1:33214/1‑140 (MQ=255)
    gggCCAAACGATGATAACTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGATATGACCGCTCCTGa                                                                                                                                    >  2:298916/1‑140 (MQ=255)
      gCCAAACGATGATAACTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGAcc                                                                                                                                  >  1:795119/1‑140 (MQ=255)
            cGATGATAACTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATc                                                                                                                            <  2:458254/140‑1 (MQ=255)
              atgatAACTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTg                                                                                                                          >  2:1007749/1‑140 (MQ=255)
                     cTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTg                                                                                                                   >  1:14388/1‑140 (MQ=255)
                       cGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGac                                                                                                                 >  1:171823/1‑140 (MQ=255)
                       cGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGac                                                                                                                 <  1:979088/140‑1 (MQ=255)
                        gCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGaca                                                                                                                >  2:895427/1‑140 (MQ=255)
                        gCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGaca                                                                                                                >  2:1352187/1‑140 (MQ=255)
                         ccAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGacac                                                                                                               >  1:772478/1‑140 (MQ=255)
                                gcgcCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGc                                                                                                        >  2:78288/1‑140 (MQ=255)
                                        aGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTa                                                                                                <  1:1057148/140‑1 (MQ=255)
                                            tcACCTGGAAAATCAAACGTTTCACCAACGCCGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGc                                                                                            >  1:242781/1‑140 (MQ=255)
                                              aCCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCtt                                                                                          >  1:340322/1‑140 (MQ=255)
                                                 tGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTgg                                                                                       <  1:499/140‑1 (MQ=255)
                                                   gAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTg                                                                                     >  2:1356060/1‑140 (MQ=255)
                                                        tCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGGGAGATc                                                                                >  2:1147037/1‑140 (MQ=255)
                                                            aCGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACt                                                                            <  1:1388921/140‑1 (MQ=255)
                                                               tttCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGc                                                                         <  1:909636/140‑1 (MQ=255)
                                                                ttCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCa                                                                        <  1:555106/140‑1 (MQ=255)
                                                                ttCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCa                                                                        <  2:795119/140‑1 (MQ=255)
                                                                          acgaACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTaat                                                              >  2:1502712/1‑139 (MQ=255)
                                                                          acgaACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAAc                                                              >  1:506218/1‑140 (MQ=255)
                                                                          acgaACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAAc                                                              >  1:1264009/1‑140 (MQ=255)
                                                                          acgaACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAAc                                                              >  1:1451068/1‑140 (MQ=255)
                                                                          acgaACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAAc                                                              >  1:1347702/1‑140 (MQ=255)
                                                                           cgaGCTCCGCCAGCGTTTCGTGGATAACACCGTTCCCCAGGTTGAAATGCTCGGTATGACCGCTCCTGGCCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACg                                                             <  2:573476/140‑1 (MQ=255)
                                                                           cgaACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACg                                                             <  2:105416/140‑1 (MQ=255)
                                                                            gaACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGa                                                            <  2:487100/140‑1 (MQ=255)
                                                                              aCTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAg                                                          <  1:1439479/140‑1 (MQ=255)
                                                                                  cGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAAt                                                      >  1:415820/1‑140 (MQ=255)
                                                                                   gCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAAtt                                                     <  1:994247/140‑1 (MQ=255)
                                                                                   gCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAAtt                                                     >  1:123216/1‑140 (MQ=255)
                                                                                   gCCAGCGTTCCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAAtt                                                     >  2:1126559/1‑140 (MQ=255)
                                                                                            tCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTcgc                                            >  2:651521/1‑140 (MQ=255)
                                                                                              gTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCgg                                          <  2:242781/140‑1 (MQ=255)
                                                                                                 gATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAAt                                       <  1:1502712/140‑1 (MQ=255)
                                                                                                 gATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAAt                                       <  1:1303457/140‑1 (MQ=255)
                                                                                                 gATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAAt                                       <  2:624510/140‑1 (MQ=255)
                                                                                                   tAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAAttt                                     <  2:14388/140‑1 (MQ=255)
                                                                                                    aaCACCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTg                                    <  2:1347702/140‑1 (MQ=255)
                                                                                                      cacCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTa                                  >  1:1000184/1‑140 (MQ=255)
                                                                                                      cacCGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTa                                  >  2:1335468/1‑140 (MQ=255)
                                                                                                        ccGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAAt                                <  2:33214/140‑1 (MQ=255)
                                                                                                         cGTTCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATc                               >  1:824670/1‑140 (MQ=255)
                                                                                                           ttCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAg                             >  1:656663/1‑140 (MQ=255)
                                                                                                           ttCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAg                             >  2:298007/1‑140 (MQ=255)
                                                                                                           ttCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAg                             >  2:898178/1‑140 (MQ=255)
                                                                                                           ttCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAg                             >  2:521000/1‑140 (MQ=255)
                                                                                                           ttCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAg                             >  1:1233152/1‑140 (MQ=255)
                                                                                                           ttCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAg                             >  2:1093186/1‑140 (MQ=255)
                                                                                                           ttCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAg                             >  1:328619/1‑140 (MQ=255)
                                                                                                            tCCACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAgg                            >  2:1344728/1‑140 (MQ=255)
                                                                                                             ccACAGGTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAGga                           >  1:344522/1‑140 (MQ=255)
                                                                                                                   gTTGAAATGCTCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTCTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAGGAGAGGCt                     <  2:772478/140‑1 (MQ=255)
                                                                                                                             tCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAGGAGAGGCTCGACGCCaaa           >  2:152005/1‑140 (MQ=255)
                                                                                                                             tCGGTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAGGAGAGGCTCGACGCCaaa           >  2:15662/1‑140 (MQ=255)
                                                                                                                                gTATGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAGGAGAGGCTCGACGCCAAACGt        <  2:1264009/140‑1 (MQ=255)
                                                                                                                                  aTGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAGGAGAGGCTCGACGCCAAACGTaa      <  2:1269291/140‑1 (MQ=255)
                                                                                                                                   tGACCGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAGGAGAGGCTCGACGCCAAACGTaaa     <  1:298916/140‑1 (MQ=255)
                                                                                                                                      ccGCTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAGGAGAGGCTCGACGCCAAACGTAAAGcc  <  2:1000184/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                        
GTTCGGGCCAAACGATGATAACTCGCCAAACAGCGCCAGAAGTCTCACCTGGAAAATCAAACGTTTCACCAACGACGAACTCCGCCAGCGTTTCGTGGATAACACCGTTCCACAGGTTGAAATGCTCGGTATGACCGTTCCTGACCCGGATCTGCATTTTGACACTGAAAGCGGTCACTACCGCTTTGGTGAGATCGACTGGCAGGAGTTTAACGAAGTAATTAACGGTCGCGGAATTTGTAATCAGGAGAGGCTCGACGCCAAACGTAAAGCC  >  NC_000913/1454508‑1454781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A