Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A5 F28 I1 R1	179	72.1	2448974	99.2%	2429382	138.4

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,032,464	T→C	G366G (GGT→GGC)	uacT →	urate:H(+) symporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,032,464	0	T	C	100.0%	174.0 / NA	50	G366G (GGT→GGC)	uacT	urate:H(+) symporter
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (20/30); total (20/30)

TGGTTAGCGTGACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCTCT  >  NC_000913/3032331‑3032593

tGGTTAGCGTGACGCGGGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTg                                                                                                                             <  2:1180850/140‑1 (MQ=255)

  gTTAGCGTGACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGAt                                                                                                                           <  1:1091079/140‑1 (MQ=255)

     aGCGTGACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGtt                                                                                                                        <  2:480128/140‑1 (MQ=255)

     aGCGTGACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGtt                                                                                                                        <  1:698792/140‑1 (MQ=255)

       cGTGACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCCTTCCGCCATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCg                                                                                                                      >  2:874991/1‑140 (MQ=255)

       cGTGACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCCTTCCCCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCg                                                                                                                      >  1:290446/1‑140 (MQ=255)

       cGTGACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGtt                                                                                                                        >  1:1069012/1‑138 (MQ=255)

       cGTGACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGtt                                                                                                                        <  2:1069012/138‑1 (MQ=255)

       cGTGACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCCCCATTTGTGCTGGGGGGCGCTGGCCTAGTGATGTTCg                                                                                                                      >  2:629580/1‑140 (MQ=255)

         tGACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGc                                                                                                                    <  2:878315/140‑1 (MQ=255)

          gACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCa                                                                                                                   <  2:901708/140‑1 (MQ=255)

          gACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCa                                                                                                                   <  2:257543/140‑1 (MQ=255)

          gACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCa                                                                                                                   <  2:757592/140‑1 (MQ=255)

            cgcgcgTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTTGGAACCTCCCTTCCGCAATTTTTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATg                                                                                                                 >  2:731942/1‑140 (MQ=255)

            cgcgcgTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCgg                                                                                                                     <  2:969158/136‑1 (MQ=255)

            cgcgcgTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCgg                                                                                                                     >  1:969158/1‑136 (MQ=255)

            cgcgcgTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCa                                                                                                                   >  2:723072/1‑138 (MQ=255)

            cgcgcgTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCa                                                                                                                   <  1:723072/138‑1 (MQ=255)

            cgcgcgTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATg                                                                                                                 >  1:1109780/1‑140 (MQ=255)

                cgTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCgg                                                                                                                     <  2:959290/132‑1 (MQ=255)

                cgTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCgg                                                                                                                     >  1:959290/1‑132 (MQ=255)

                           gCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAggg                                                                                                  >  2:941150/1‑140 (MQ=255)

                             tGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCCTTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGGACTGGCGACAggggt                                                                                                >  2:1131494/1‑138 (MQ=255)

                             tGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGAt                                                                                                >  1:426121/1‑140 (MQ=255)

                                           ttcGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTcgc                                                                                  <  1:941150/140‑1 (MQ=255)

                                             cGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCgcgc                                                                                >  1:1110074/1‑140 (MQ=255)

                                              gggAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCt                                                                               <  1:629580/140‑1 (MQ=255)

                                               ggAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTg                                                                              >  2:463334/1‑140 (MQ=255)

                                                gAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGt                                                                             <  2:426121/140‑1 (MQ=255)

                                                           aTCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTAcaccac                                                                  <  1:43488/140‑1 (MQ=255)

                                                                gTTTGGCATGGTGCCAAAAATGGCGGTGGTGGTAGCCTCCCTTTCGCCATTTTTGCTGGGGGGCGCCGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAAcc                                                             >  2:278658/1‑140 (MQ=255)

                                                                gTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGGGGCGCTGGCCTAGTGATGTTCGGCATGGGACTTGCGACAGGGGTTCGAATTCTGTCGCGCTGTAACTACACCACCAAcc                                                             >  2:331208/1‑140 (MQ=255)

                                                                gTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAAcc                                                             >  1:202309/1‑140 (MQ=255)

                                                                gTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAAcc                                                             >  1:172333/1‑140 (MQ=255)

                                                                gTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAAcc                                                             >  1:5372/1‑140 (MQ=255)

                                                                gTTTGGCATGGTGCCAAAAATGGCGGCGTTGGTCGTCCCCATTCCGCCATTTGTGGTGGGGGGCGCTGGGGTACGGATGTTTCGGGTTGTAACCGCGGAAGGGGTTCCAATTCTTTCGCGCTGTAACTTCACCACCAAcc                                                             >  2:393284/1‑140 (MQ=255)

                                                                 tttGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAAccc                                                            >  1:429715/1‑139 (MQ=255)

                                                                     gCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTAc                                                        <  2:57625/140‑1 (MQ=255)

                                                                     gCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTAc                                                        <  1:319992/140‑1 (MQ=255)

                                                                     gCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTAc                                                        <  1:463334/140‑1 (MQ=255)

                                                                      cATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACa                                                       >  1:1131396/1‑140 (MQ=255)

                                                                       aTGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACaa                                                      <  2:5372/140‑1 (MQ=255)

                                                                           tGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTTTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTTCAACctc                                                  >  2:402083/1‑140 (MQ=255)

                                                                           tGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACctc                                                  >  2:425587/1‑140 (MQ=255)

                                                                             ccAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTAc                                                        >  2:25780/1‑132 (MQ=255)

                                                                             ccAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTAc                                                        <  1:25780/132‑1 (MQ=255)

                                                                             ccAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCta                                                <  1:1036693/140‑1 (MQ=255)

                                                                               aaaaaTGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCtata                                              <  2:202309/140‑1 (MQ=255)

                                                                                         gTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGAt                                    <  1:443123/140‑1 (MQ=255)

                                                                                         gTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGAt                                    <  2:505705/140‑1 (MQ=255)

                                                                                                    cTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCg                         >  1:1182857/1‑140 (MQ=255)

                                                                                                     tCCATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGt                        <  2:172333/140‑1 (MQ=255)

                                                                                                       cATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTg                      >  1:987422/1‑140 (MQ=255)

                                                                                                       cATTCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTg                      >  2:1214464/1‑140 (MQ=255)

                                                                                                         ttCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGAt                                    <  2:1110727/124‑1 (MQ=255)

                                                                                                         ttCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGAt                                    >  1:1110727/1‑124 (MQ=255)

                                                                                                         ttCCGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGc                    >  2:606376/1‑140 (MQ=255)

                                                                                                           ccGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCAt                  <  1:425587/140‑1 (MQ=255)

                                                                                                            cGCAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATg                 >  1:733837/1‑140 (MQ=255)

                                                                                                              cAATTTGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGAc               >  2:607446/1‑140 (MQ=255)

                                                                                                                  ttGTGCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCg           <  2:290446/140‑1 (MQ=255)

                                                                                                                   tgtgCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGa          >  2:10333/1‑140 (MQ=255)

                                                                                                                   tgtgCTGGGCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGa          >  2:1195537/1‑140 (MQ=255)

                                                                                                                         gggCGGCGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGctct    >  2:1187168/1‑140 (MQ=255)

                                                                                                                          ggcggcGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCa                   >  2:832212/1‑124 (MQ=255)

                                                                                                                          ggcggcGCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCa                   <  1:832212/124‑1 (MQ=255)

                                                                                                                           gcggcgCTGGCCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGctctct  >  2:567722/1‑140 (MQ=255)

TGGTTAGCGTGACGCGCGTTCATAGCCGCTGGGTGTGTATTTCTTCGGGAATTATATTAATCCTGTTTGGCATGGTGCCAAAAATGGCGGTGCTGGTAGCCTCCATTCCGCAATTTGTGCTGGGCGGCGCTGGTCTAGTGATGTTCGGCATGGTACTGGCGACAGGGATTCGAATTCTGTCGCGCTGTAACTACACCACCAACCGTTACAACCTCTATATTGTGGCGATCAGTCTCGGCGTTGGCATGACTCCGACGCTCTCT  >  NC_000913/3032331‑3032593

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A