Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F48 I1 R1
|
45 |
111.1 |
3780378 |
99.2% |
3750134 |
139.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,216,092 |
C→A |
V134L (GTG→TTG) |
nfeF ← |
NADPH‑dependent ferric chelate reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,216,092 | 0 | C | A | 100.0%
| 400.4
/ NA
| 113 | V134L (GTG→TTG) | nfeF | NADPH‑dependent ferric chelate reductase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (58/55); total (58/55) |
Only 100 of 124 total aligned reads displayed.
ATCCCGCACGCTAACCAGCGCACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCACCAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAGCGGCGTA > NC_000913/3215958‑3216228
|
aTCCCGCACGCTAACCAGCGCACTAACTTGCGGTTTAACGGCAAGTTTGATCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCg > 2:1501696/1‑140 (MQ=255)
cccGCACGCTAACCAGCGCACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGaa < 1:1094984/140‑1 (MQ=255)
cccGCACGCTAACCAGCGCACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGaa < 1:1477107/140‑1 (MQ=255)
cccGCACGCTAACCAGCGCACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGaa < 2:826333/140‑1 (MQ=255)
gCACGCTAACCAGCGCACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACcg > 2:1474961/1‑140 (MQ=255)
cACGCTAACCAGCGCACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGTATTCCGGATTCATCGCAGACTTACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACcgc > 2:766086/1‑140 (MQ=255)
cACGCTAACCAGCGCACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACcgc < 2:206521/140‑1 (MQ=255)
cACGCTAACCAGCGCACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACcgc > 1:1266438/1‑140 (MQ=255)
cGCTAACCAGCGCACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACcgcgc < 2:301760/140‑1 (MQ=255)
cGCTAACCAGCGCACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACcgcgc < 2:1674964/140‑1 (MQ=255)
cGCTAACCAGCGCACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACcgcgc < 1:1097527/140‑1 (MQ=255)
tAACCAGCGCACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGa > 1:372151/1‑140 (MQ=255)
cgcACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCa > 1:1878174/1‑140 (MQ=255)
gcACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCt > 2:1648809/1‑135 (MQ=255)
gcACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCt < 1:1648809/135‑1 (MQ=255)
gcACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCAc > 1:1568143/1‑140 (MQ=255)
gcACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCAc > 1:1833594/1‑140 (MQ=255)
tAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTa > 2:453209/1‑140 (MQ=255)
tAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTa > 1:1655325/1‑140 (MQ=255)
tAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTa > 1:1143038/1‑140 (MQ=255)
tGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGttt > 1:1885191/1‑140 (MQ=255)
gCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTa < 1:522212/140‑1 (MQ=255)
tttAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGc > 2:1308153/1‑140 (MQ=255)
tAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGccc > 2:556583/1‑140 (MQ=255)
tAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGccc > 1:734805/1‑140 (MQ=255)
tAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGccc > 2:1606818/1‑140 (MQ=255)
aCGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCgt > 2:102315/1‑139 (MQ=255)
cGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGt < 2:1364974/140‑1 (MQ=255)
cGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGt < 1:1367199/140‑1 (MQ=255)
cGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGt < 1:1606818/140‑1 (MQ=255)
aaGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTgcg < 2:1655325/140‑1 (MQ=255)
aaGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTgcg < 1:749866/140‑1 (MQ=255)
aGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTgcgc > 1:482128/1‑140 (MQ=255)
tGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGc > 1:800532/1‑140 (MQ=255)
aGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCt < 1:57515/140‑1 (MQ=255)
ggcggcggcGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTg > 2:1890046/1‑140 (MQ=255)
cggcggcgCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGc < 2:1878174/140‑1 (MQ=255)
cggcggcgCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGc > 1:1794194/1‑140 (MQ=255)
ggcggcgCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCg > 2:1453886/1‑140 (MQ=255)
gcggcgCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGa < 2:372151/140‑1 (MQ=255)
cggcgCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGAc > 2:1815433/1‑140 (MQ=255)
cggcgCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGAc > 1:948081/1‑140 (MQ=255)
gcgcAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGAccc > 1:600518/1‑140 (MQ=255)
gcAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCa < 2:1794194/140‑1 (MQ=255)
gcAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCa < 2:1266438/140‑1 (MQ=255)
gcAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCa < 2:616149/140‑1 (MQ=255)
gcAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCa < 1:1888943/140‑1 (MQ=255)
gcAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCa < 1:556583/140‑1 (MQ=255)
gcAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCa < 2:482128/140‑1 (MQ=255)
cAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACcgtcg > 2:846858/1‑140 (MQ=255)
gCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGa > 1:49982/1‑140 (MQ=255)
ccGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATaaa > 1:683258/1‑140 (MQ=255)
ccGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATaaa > 1:1550385/1‑140 (MQ=255)
ccGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATaaa > 1:313742/1‑140 (MQ=255)
ccGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATaaa > 1:338949/1‑140 (MQ=255)
cGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAg > 2:443388/1‑140 (MQ=255)
aTCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGTATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAaatcaa > 1:1792883/1‑140 (MQ=255)
gCAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCg > 1:388325/1‑140 (MQ=255)
cAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGc < 2:1842617/140‑1 (MQ=255)
cAGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCAACGCCCAGCCGCTGGCGACCCCTCCGTCGTGAATAAAGAAATCAATCGc < 1:766086/140‑1 (MQ=255)
aGACATACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGcc > 1:1330732/1‑140 (MQ=255)
aaTACAGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGt < 2:49982/139‑1 (MQ=255)
aGCTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATg < 1:1481976/140‑1 (MQ=255)
cTGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGc > 2:774823/1‑140 (MQ=255)
tGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGTCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCg < 1:1813660/140‑1 (MQ=255)
tGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCg < 1:1474961/140‑1 (MQ=255)
tGATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCg < 1:94691/140‑1 (MQ=255)
gATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGt > 2:1203626/1‑140 (MQ=255)
gATACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGt > 1:809495/1‑140 (MQ=255)
aTACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTa < 2:948081/140‑1 (MQ=255)
aTACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTa > 2:553841/1‑140 (MQ=255)
aTACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTa < 1:453209/140‑1 (MQ=255)
aTACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTa > 2:1351919/1‑140 (MQ=255)
tACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAg > 1:1069723/1‑140 (MQ=255)
tACGCGTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCACCAGTTCATGGCATAg > 1:366231/1‑140 (MQ=255)
cgTAATCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCg > 2:1704381/1‑140 (MQ=255)
tCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATa > 2:1453950/1‑140 (MQ=255)
tCTTCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTACATGGCGTAGTTCGTCATa < 2:1833594/140‑1 (MQ=255)
tCTTCCGGCACAAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCAGGTTGCGCCTGCATCGCCCAACCGCTGGCAACCGCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATa < 2:1710530/140‑1 (MQ=255)
ttCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACa < 2:313742/140‑1 (MQ=255)
ttCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACa < 1:1549120/140‑1 (MQ=255)
tCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAg > 2:1749300/1‑140 (MQ=255)
tCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAg < 1:1704381/140‑1 (MQ=255)
tCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAg < 2:734805/140‑1 (MQ=255)
tCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAg < 1:972338/140‑1 (MQ=255)
tCCGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAg < 1:1383794/140‑1 (MQ=255)
ccGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAgc > 2:1003734/1‑140 (MQ=255)
ccGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAgc < 1:1453886/140‑1 (MQ=255)
cGGCACCAACAGCGAACCGCGCGGACCTGCCTCTGTAAGTTTATCACCAGGTTGCGCCTGCACCGCCCAGCCGCTGGCGACCCCGCCGTCGTGAATAAAGAAAACAATCGCCAGTTCATGGCGTAGTTCGTCATACAgcg < 2:1745911/140‑1 (MQ=255)
cGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAgct > 2:567420/1‑139 (MQ=255)
cGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAgcg < 1:202882/140‑1 (MQ=255)
cGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAgcg > 1:1584846/1‑140 (MQ=255)
cGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAgcg > 2:344780/1‑140 (MQ=255)
cGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAgcg < 2:1330732/140‑1 (MQ=255)
cGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAgcg < 2:1885191/140‑1 (MQ=255)
cGGCACCAACAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAgcg < 2:1855160/140‑1 (MQ=255)
caccaaCAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAgcggcg < 1:1890046/140‑1 (MQ=255)
caccaaCAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAgcggcg < 1:1308153/140‑1 (MQ=255)
ccaacaGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGGCCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAGCGGCGta < 2:800532/140‑1 (MQ=255)
ccaacaGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAGCGGCGta < 2:70574/140‑1 (MQ=255)
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ATCCCGCACGCTAACCAGCGCACTAACTTGCGGTTTAACGGCAAGTTTGCTCAACGTTTCCAGGCGGCGGCGCAATGCAGGCATTCCGGATTCATCGCAGACATACAGCTGATACGCGTAATCTTCCGGCACCACCAGCGAACCGCGCGGACCTGCCACCGTAAGTTTATCGCCCGGTTGCGCCTGCATCGCCCAGCCGCTGGCGACCCCACCGTCGTGAATAAAGAAATCAATCGCCAGTTCATGGCGTAGTTCGTCATACAGCGGCGTA > NC_000913/3215958‑3216228
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
