Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A13 F48 I1 R1
|
62 |
147.6 |
5031800 |
99.1% |
4986513 |
139.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,972,063 |
C→A |
S156* (TCG→TAG) |
tas → |
putative NADP(H)‑dependent aldo‑keto reductase Tas |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,972,063 | 0 | C | A | 99.3%
| 504.9
/ ‑3.1
| 142 | S156* (TCG→TAG) | tas | putative NADP(H)‑dependent aldo‑keto reductase Tas |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (82/59); total (83/59) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.02e-01 |
Only 100 of 143 total aligned reads displayed.
CCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTCGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGATCTGCCGCGTAT > NC_000913/2971926‑2972198
|
ccGCGAAGCGCTGCATGACAGCCTCAAGCGCCT‑CAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAgct < 1:1008170/140‑1 (MQ=255)
cgcgAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAgct < 1:2269212/140‑1 (MQ=255)
cgcgAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAgct < 1:1308184/140‑1 (MQ=255)
cgcgAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCCCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAgct < 1:2416835/140‑1 (MQ=255)
cgAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAgctgc > 2:2040888/1‑140 (MQ=255)
aaGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGctgctg > 2:1241425/1‑140 (MQ=255)
gACAGCCTCAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGa < 2:743896/140‑1 (MQ=255)
gACAGCCTCAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGa < 2:1743268/140‑1 (MQ=255)
ccTCAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCTTGCGGTTTAGCTGTTGGATACGCTGGACGCAc > 1:1408216/1‑140 (MQ=255)
acTCAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCAc < 2:844131/139‑1 (MQ=255)
tCAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACtt > 2:1036789/1‑139 (MQ=255)
cAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTgg < 1:1513333/140‑1 (MQ=255)
cAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTgg < 1:409957/140‑1 (MQ=255)
cAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTgg < 2:1799725/140‑1 (MQ=255)
aaGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGc > 1:377949/1‑140 (MQ=255)
aGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCa < 2:716169/140‑1 (MQ=255)
gATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAACCTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAAcgcgc < 1:1785143/140‑1 (MQ=255)
aTTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGTGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAAcgcgcg > 1:368182/1‑140 (MQ=255)
aTTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAAcgcgcg > 1:936964/1‑140 (MQ=255)
aTTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAAcgcgcg > 1:489680/1‑140 (MQ=255)
aTTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAAcgcgcg > 1:757245/1‑140 (MQ=255)
aTTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAAcgcgcg > 2:2314521/1‑140 (MQ=255)
aTTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAAcgcgcg > 1:1381077/1‑140 (MQ=255)
ttACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCgg > 2:1920020/1‑140 (MQ=255)
ttACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCgg > 2:1621820/1‑140 (MQ=255)
tACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCggg < 2:14004/140‑1 (MQ=255)
aCCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGa > 2:764705/1‑140 (MQ=255)
cTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGaaa > 2:332588/1‑140 (MQ=255)
cTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGaaa > 1:1611003/1‑140 (MQ=255)
tCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGaaaa > 1:384943/1‑140 (MQ=255)
gATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAAt > 1:422760/1‑140 (MQ=255)
aTCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAAtt < 1:1241425/140‑1 (MQ=255)
tCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTc > 2:2442424/1‑140 (MQ=255)
tCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTc > 1:2276931/1‑140 (MQ=255)
tCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTc > 2:2346307/1‑140 (MQ=255)
cTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCg < 2:1207931/140‑1 (MQ=255)
gTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCgg > 2:587915/1‑140 (MQ=255)
atGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCgg > 1:1853671/2‑140 (MQ=255)
atGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGATATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACACACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCgg > 2:2361902/2‑140 (MQ=255)
tGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGc > 1:593908/1‑140 (MQ=255)
gCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCg > 1:360176/1‑140 (MQ=255)
gCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCg > 2:1449175/1‑140 (MQ=255)
cACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCgt > 2:1877329/1‑140 (MQ=255)
aCTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCgtg < 1:601162/140‑1 (MQ=255)
aCTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCgtg > 2:1650052/1‑140 (MQ=255)
aCTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCgtg > 1:1224594/1‑140 (MQ=255)
gCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTgga > 2:2295961/1‑140 (MQ=255)
gCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTcga > 2:482841/1‑140 (MQ=255)
gCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTcga > 1:86317/1‑140 (MQ=255)
gCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTcga > 1:201175/1‑140 (MQ=255)
gCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTcga > 1:1707244/1‑140 (MQ=255)
ccGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTcgaa < 2:468399/140‑1 (MQ=255)
aGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTcgaacgaa > 1:1136719/1‑140 (MQ=255)
gcgcCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGaaa < 2:459898/140‑1 (MQ=255)
ccGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGGACGAAACTGc > 2:1831983/1‑140 (MQ=255)
ccGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGc > 1:587423/1‑140 (MQ=255)
gACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCAt < 2:1224594/140‑1 (MQ=255)
gACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCAt < 1:332588/140‑1 (MQ=255)
aCCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGTTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCAtt < 2:1408216/140‑1 (MQ=255)
cAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTg < 1:482841/140‑1 (MQ=255)
aCTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGc > 1:1061181/1‑140 (MQ=255)
tGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGt < 2:2165635/140‑1 (MQ=255)
cGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAAttt > 2:1320422/1‑138 (MQ=255)
cGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATgc < 1:1920020/140‑1 (MQ=255)
cGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATgc > 1:726251/1‑140 (MQ=255)
ggCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATgcg < 2:2011777/140‑1 (MQ=255)
ggCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATgcg < 1:1364316/140‑1 (MQ=255)
ggCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATgcg < 1:965559/140‑1 (MQ=255)
aaCTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTAc > 2:1330385/1‑140 (MQ=255)
cTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCt > 2:766931/1‑140 (MQ=255)
cTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCt > 2:1618418/1‑140 (MQ=255)
aGCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGc < 2:384943/140‑1 (MQ=255)
gCTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCg < 1:2327246/140‑1 (MQ=255)
cTGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCgg > 2:36668/1‑140 (MQ=255)
tGGACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGa < 2:38680/140‑1 (MQ=255)
ggACGGATTCTGCGCCTGCGGTTTCGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGAc > 1:868483/1‑140 (MQ=255)
ggACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGAc > 1:1154530/1‑140 (MQ=255)
ggACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGAc > 2:46814/1‑140 (MQ=255)
gACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTg > 2:862015/1‑133 (MQ=255)
gACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTg < 1:862015/133‑1 (MQ=255)
gACGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACa > 2:2334374/1‑140 (MQ=255)
aCGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACaa > 2:1672329/1‑140 (MQ=255)
aCGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACaa > 1:674131/1‑140 (MQ=255)
aCGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACaa < 1:764705/140‑1 (MQ=255)
aCGGATTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACCGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACaa > 2:86839/1‑140 (MQ=255)
aTTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAacac > 1:1027625/1‑140 (MQ=255)
aTTCTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAacac > 1:385164/1‑140 (MQ=255)
cTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGAt < 2:489680/140‑1 (MQ=255)
cTGCGCCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGAt < 2:1061181/140‑1 (MQ=255)
gcgcCTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGATCt < 2:804451/140‑1 (MQ=255)
ccTTCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCCTTTTGCTGAATGCGCTACCTGCATCTGGCGGACAAAAACGATCTGcc > 2:1551506/1‑140 (MQ=255)
cTGTGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACCGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGATCTGCcg < 2:368182/140‑1 (MQ=255)
cTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGATCTGCcg < 2:1136719/140‑1 (MQ=255)
cTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGATCTGCcg < 1:2334374/140‑1 (MQ=255)
cTGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGATCTGCcg < 1:2314521/140‑1 (MQ=255)
tGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGATCTGCcgc < 2:1154530/140‑1 (MQ=255)
tGCGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGATCTGCcgc < 1:1449175/140‑1 (MQ=255)
cGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGATCTGCCGCGt > 2:1563022/1‑140 (MQ=255)
cGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGATCTGCCGCGt < 2:593908/140‑1 (MQ=255)
cGGTTTAGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGATCTGCCGCGt > 2:6225/1‑140 (MQ=255)
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CCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCTCGATCTTTATCAGGTGCACTGGCCGCAGCGCCCGACCAACTGCTTCGGCAAACTCGGTTATAGCTGGACGGATTCTGCGCCTGCGGTTTCGCTGCTGGATACGCTGGACGCACTGGCAGAGTACCAACGCGCGGGAAAAATTCGTTATATCGGCGTGTCGAACGAAACTGCATTTGGCGTAATGCGCTACCTGCATCTGGCGGACAAACACGATCTGCCGCGTAT > NC_000913/2971926‑2972198
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
