Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A13 F48 I1 R1	62	147.6	5031800	99.1%	4986513	139.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,017,295	2 bp→CT	coding (1236‑1237/3099 nt)	ygfK →	putative oxidoreductase, Fe‑S subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,017,295	0	A	C	100.0%	634.2 / NA	159	G412G (GGA→GGC)	ygfK	putative oxidoreductase, Fe‑S subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (88/71); total (88/71)
*	NC_000913	3,017,296	0	C	T	100.0%	576.9 / NA	160	L413F (CTT→TTT)	ygfK	putative oxidoreductase, Fe‑S subunit
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (88/72); total (88/72)

Only 100 of 162 total aligned reads displayed.

AGTCAGCTGACTATCCGCGATATTTTTGATACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGACTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGACCGACTGCT  >  NC_000913/3017161‑3017425

||

aGTCAGCTGACTATCCGCGATATTTTTGATACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGa                                                                                                                               >  1:988823/1‑140 (MQ=255)

           tATCCGCGATATTTTTGATACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGAct                                                                                                                    >  2:2018336/1‑139 (MQ=255)

              ccGCGATATTTTTGATACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCg                                                                                                                 <  2:988823/140‑1 (MQ=255)

                gcgATATTTTTGATACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGaa                                                                                                               <  1:647049/140‑1 (MQ=255)

                   atatTTTTGATACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGa                                                                                                            <  2:524970/140‑1 (MQ=255)

                   atatTTTTGATACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGa                                                                                                            <  1:1514904/140‑1 (MQ=255)

                     atTTTTGATACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACt                                                                                                          >  1:605059/1‑140 (MQ=255)

                       ttttGATACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGa                                                                                                        >  2:569591/1‑140 (MQ=255)

                         ttGATACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAAc                                                                                                      >  1:1492862/1‑140 (MQ=255)

                         ttGATACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAAc                                                                                                      <  1:1436453/140‑1 (MQ=255)

                            aTACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGa                                                                                                   >  1:959889/1‑140 (MQ=255)

                                aGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGaa                                                                                                               >  1:1145239/1‑124 (MQ=255)

                                aGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTgg                                                                                               >  2:1955690/1‑140 (MQ=255)

                                 ggTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGgc                                                                                              <  1:1103946/140‑1 (MQ=255)

                                  gTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGgca                                                                                             >  1:1279394/1‑140 (MQ=255)

                                    aTTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGgcagc                                                                                           >  2:1367883/1‑140 (MQ=255)

                                     ttCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGgcagca                                                                                          <  1:569591/140‑1 (MQ=255)

                                     ttCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGgcagca                                                                                          <  1:1990033/140‑1 (MQ=255)

                                      tCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGcagcag                                                                                         <  1:1355355/140‑1 (MQ=255)

                                       cGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGa                                                                                        <  1:500532/140‑1 (MQ=255)

                                          ccTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGc                                                                                     >  1:876544/1‑140 (MQ=255)

                                           cTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCg                                                                                    <  2:605059/140‑1 (MQ=255)

                                             aTTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGtt                                                                                  >  1:369011/1‑140 (MQ=255)

                                             aTTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGtt                                                                                  >  1:2485735/1‑140 (MQ=255)

                                             aTTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGtt                                                                                  <  1:574490/140‑1 (MQ=255)

                                             aTTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGtt                                                                                  >  1:349078/1‑140 (MQ=255)

                                             aTTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGtt                                                                                  <  1:2078091/140‑1 (MQ=255)

                                             aTTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGtt                                                                                  >  2:871560/1‑140 (MQ=255)

                                             aTTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGtt                                                                                  >  2:2158548/1‑140 (MQ=255)

                                             aTTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGtt                                                                                  <  2:2485735/140‑1 (MQ=255)

                                             aTTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGtt                                                                                  >  2:47341/1‑140 (MQ=255)

                                             aTTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGtt                                                                                  >  2:683676/1‑140 (MQ=255)

                                             aTTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGtt                                                                                  >  2:712559/1‑140 (MQ=255)

                                             aTTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGt                                                                                   >  2:2388849/1‑139 (MQ=255)

                                               tACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTaa                                                                                <  2:1854265/140‑1 (MQ=255)

                                                tcTATGGCAACCGACCTGCTGAAACCTGGC‑GCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAAcc                                                                              <  1:2053126/139‑1 (MQ=255)

                                                 cTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAAcc                                                                              <  1:920609/140‑1 (MQ=255)

                                                 cTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAAcc                                                                              <  1:871560/140‑1 (MQ=255)

                                                 cTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAAcc                                                                              <  1:2018336/140‑1 (MQ=255)

                                                 cTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAAcc                                                                              <  1:157638/140‑1 (MQ=255)

                                                   aTGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCAt                                                                            >  1:1031224/1‑140 (MQ=255)

                                                    tGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCAtt                                                                           >  2:981994/1‑139 (MQ=255)

                                                    tGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATg                                                                           >  1:293852/1‑140 (MQ=255)

                                                    tGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATg                                                                           >  2:1607907/1‑140 (MQ=255)

                                                    tGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATg                                                                           >  2:2163450/1‑140 (MQ=255)

                                                    tGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATg                                                                           >  1:2287843/1‑140 (MQ=255)

                                                    tGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATg                                                                           >  2:720100/1‑140 (MQ=255)

                                                    tGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATg                                                                           >  1:843366/1‑140 (MQ=255)

                                                    tGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACAATg                                                                           >  2:1720674/1‑140 (MQ=255)

                                                     ggCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATgg                                                                          >  1:33237/1‑140 (MQ=255)

                                                      gCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGa                                                                         >  1:713702/1‑140 (MQ=255)

                                                      gCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGa                                                                         >  2:795643/1‑140 (MQ=255)

                                                      gCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGa                                                                         >  2:1927721/1‑140 (MQ=255)

                                                      gCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGa                                                                         >  1:812025/1‑140 (MQ=255)

                                                      gCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGa                                                                         >  2:2054231/1‑140 (MQ=255)

                                                      gCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGa                                                                         >  1:1102714/1‑140 (MQ=255)

                                                       cAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGaa                                                                        <  2:2375620/140‑1 (MQ=255)

                                                        aaCCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAAt                                                                       >  1:2123138/1‑140 (MQ=255)

                                                        aaCCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAAt                                                                       >  2:592908/1‑140 (MQ=255)

                                                        aaCCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAAt                                                                       >  1:1849876/1‑140 (MQ=255)

                                                           cGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATaca                                                                    <  2:1492862/140‑1 (MQ=255)

                                                            gACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATacac                                                                   >  1:2291719/1‑140 (MQ=255)

                                                                  ctgAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGaa                                                             >  1:2030938/1‑140 (MQ=255)

                                                                  ctgAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGaa                                                             >  2:150439/1‑140 (MQ=255)

                                                                       aCCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACt                                                        >  1:999412/1‑140 (MQ=255)

                                                                        ccTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTg                                                       <  1:2135495/140‑1 (MQ=255)

                                                                            gcggcTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGATGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAg                                                   >  1:1073253/1‑140 (MQ=255)

                                                                            gcggcTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGaaa                                                   >  2:1958510/1‑139 (MQ=255)

                                                                            gcggcTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAg                                                   >  1:1683204/1‑140 (MQ=255)

                                                                             cggcTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGc                                                  <  1:1958510/140‑1 (MQ=255)

                                                                                cTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCag                                               <  1:2385496/140‑1 (MQ=255)

                                                                                    cTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCagaaga                                           <  1:1731364/140‑1 (MQ=255)

                                                                                    cTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCagaaga                                           <  2:2420804/140‑1 (MQ=255)

                                                                                    cTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCagaaga                                           <  1:2163450/140‑1 (MQ=255)

                                                                                      gcgcTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGc                                         >  2:797514/1‑140 (MQ=255)

                                                                                        gcTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGGCCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGt                                       <  2:1279394/140‑1 (MQ=255)

                                                                                            aaGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTg                                   >  2:1453826/1‑140 (MQ=255)

                                                                                             aGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGATGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGa                                  <  2:1073253/140‑1 (MQ=255)

                                                                                             aGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGa                                  >  2:986182/1‑140 (MQ=255)

                                                                                             aGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGa                                  >  1:1884622/1‑140 (MQ=255)

                                                                                              gTGCCTGCATGCGCGAGCTGGATGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGaa                                 <  1:2109004/140‑1 (MQ=255)

                                                                                               tGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAg                                <  1:2433272/140‑1 (MQ=255)

                                                                                                 ccTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTg                              >  1:1186463/1‑140 (MQ=255)

                                                                                                  cTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTgg                             <  2:939719/140‑1 (MQ=255)

                                                                                                   tGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGc                            >  1:291872/1‑140 (MQ=255)

                                                                                                                  gAAGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCt             >  2:1637592/1‑140 (MQ=255)

                                                                                                                   aaGGCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTg            >  2:1081473/1‑140 (MQ=255)

                                                                                                                    aGGCTCCGACGCCTGGGGCTTTGACCTTGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGa           >  2:1769229/1‑140 (MQ=255)

                                                                                                                     agCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGCCCTGCCGCTGAc          <  2:2030938/139‑1 (MQ=255)

                                                                                                                      gCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGAcc         >  2:763335/1‑140 (MQ=255)

                                                                                                                      gCTCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGAcc         <  1:18372/140‑1 (MQ=255)

                                                                                                                        tCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGACCGa       >  1:1430966/1‑140 (MQ=255)

                                                                                                                        tCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGACCGa       >  1:93287/1‑140 (MQ=255)

                                                                                                                        tCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGACCGa       >  1:1208202/1‑140 (MQ=255)

                                                                                                                        tCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGACCGa       >  1:1750460/1‑140 (MQ=255)

                                                                                                                        tCCGACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGACCGa       >  2:135419/1‑140 (MQ=255)

                                                                                                                           gACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGACCGACTg    <  2:2287843/140‑1 (MQ=255)

                                                                                                                           gACGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAAAAGACCTGCCGCTGACCGACTg    <  1:797514/140‑1 (MQ=255)

                                                                                                                            aCGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGACCGACTGc   >  1:1118420/1‑140 (MQ=255)

                                                                                                                             cGCCTGGGGCTTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGACCGactact  <  2:876544/140‑1 (MQ=255)

||

AGTCAGCTGACTATCCGCGATATTTTTGATACAGGTATTCGCCCTATTACTATGGCAACCGACCTGCTGAAACCTGGCGGCTATCTGCGCTTAAGTGCCTGCATGCGCGAGCTGGAAGGCTCCGACGCCTGGGGACTTGACCATGTTGACGTCGAACGACTGAACAGACTGGCAGCAGATGCGTTAACCATGGAATACACCCAGAAACACTGGAAGCCAGAAGAGCGTATTGAAGTGGCAGAAGACCTGCCGCTGACCGACTGCT  >  NC_000913/3017161‑3017425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A