Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A13 F48 I1 R1	62	147.6	5031800	99.1%	4986513	139.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,059,732	G→T	V442V (GTG→GTT)	bipA →	ribosome‑dependent GTPase, ribosome assembly factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,059,732	0	G	T	100.0%	572.8 / NA	159	V442V (GTG→GTT)	bipA	ribosome‑dependent GTPase, ribosome assembly factor
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (72/87); total (72/87)

Only 100 of 159 total aligned reads displayed.

GAGCCGTATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTGATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTCAGCGTCAGAACGGCGTA  >  NC_000913/4059598‑4059867

gagCCGTATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATccc                                                                                                                                    <  2:369614/140‑1 (MQ=255)

gagCCGTATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATccc                                                                                                                                    <  1:1835994/140‑1 (MQ=255)

gagCCGTATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATccc                                                                                                                                    <  2:2391776/140‑1 (MQ=255)

gagCCGTATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATccc                                                                                                                                    >  1:1796653/1‑140 (MQ=255)

gagCCGTATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATccc                                                                                                                                    >  1:1226229/1‑140 (MQ=255)

gagCCGTATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATccc                                                                                                                                    >  1:223860/1‑140 (MQ=255)

gagCCGTATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATccc                                                                                                                                    >  1:2370109/1‑140 (MQ=255)

gagCCGTATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATccc                                                                                                                                    >  1:2483974/1‑140 (MQ=255)

gagCCGTATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATccc                                                                                                                                    <  2:1105681/140‑1 (MQ=255)

  gCCGTATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCaa                                                                                                                                  >  1:2208321/1‑140 (MQ=255)

      tATGAAAACGTTACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCg                                                                                                                              >  1:1489029/1‑140 (MQ=255)

      tATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCg                                                                                                                              >  1:398689/1‑140 (MQ=255)

           aaaCGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTc                                                                                                                         >  1:870570/1‑140 (MQ=255)

                tGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGAtt                                                                                                                    >  2:1462733/1‑140 (MQ=255)

                tGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGAtt                                                                                                                    >  1:1070433/1‑140 (MQ=255)

                  aCTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTgg                                                                                                                  <  1:1732594/140‑1 (MQ=255)

                  aCTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTgg                                                                                                                  >  2:2437322/1‑140 (MQ=255)

                     ctGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCtt                                                                                                               <  2:2127494/140‑1 (MQ=255)

                        gACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCg                                                                                                            >  1:206315/1‑140 (MQ=255)

                          cGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGtt                                                                                                          <  2:1370276/140‑1 (MQ=255)

                           gTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTc                                                                                                         >  1:2042197/1‑140 (MQ=255)

                            ttGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCt                                                                                                        <  1:592591/140‑1 (MQ=255)

                            ttGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCt                                                                                                        <  2:1607256/140‑1 (MQ=255)

                             tGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCtt                                                                                                       >  2:1947820/1‑139 (MQ=255)

                              gaagaaCAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGa                                                                                                      >  1:1909457/1‑140 (MQ=255)

                              gaagaaCAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGa                                                                                                      >  1:429253/1‑140 (MQ=255)

                                agaaCAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGt                                                                                                    >  1:102380/1‑140 (MQ=255)

                                      gCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTcatga                                                                                              >  2:355692/1‑140 (MQ=255)

                                       cATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTcatgac                                                                                             >  2:2307194/1‑140 (MQ=255)

                                       cATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTcatgac                                                                                             >  2:1917687/1‑140 (MQ=255)

                                       cATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTcatgac                                                                                             >  2:584189/1‑140 (MQ=255)

                                       cATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTcatgac                                                                                             >  1:45064/1‑140 (MQ=255)

                                         tCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTcatgacca                                                                                           >  2:1136798/1‑140 (MQ=255)

                                         tCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTcatgacca                                                                                           >  2:1649124/1‑140 (MQ=255)

                                           aGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTcatgaccatg                                                                                         <  1:2437322/140‑1 (MQ=255)

                                           aGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTcatgaccatg                                                                                         <  2:45064/140‑1 (MQ=255)

                                              gTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACt                                                                                      <  2:405120/140‑1 (MQ=255)

                                                tCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTc                                                                                    <  2:664412/140‑1 (MQ=255)

                                                tCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTc                                                                                    <  2:2042197/140‑1 (MQ=255)

                                                     aaTGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTa                                                                               <  2:646838/140‑1 (MQ=255)

                                                     aaTGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTa                                                                               <  2:143532/140‑1 (MQ=255)

                                                       tGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACt                                                                             >  1:25915/1‑140 (MQ=255)

                                                       tGCAGGCGCTGGGCGAACGAAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACt                                                                             >  1:1074138/1‑140 (MQ=255)

                                                        gCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTg                                                                            <  2:1489029/140‑1 (MQ=255)

                                                         cAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTgg                                                                           >  1:1633702/1‑140 (MQ=255)

                                                         cAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTgg                                                                           >  2:1750854/1‑140 (MQ=255)

                                                          aGGCGCTGGGCGAACGTAAAGGCGACCTGAAGAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGt                                                                          <  1:1649124/140‑1 (MQ=255)

                                                           ggCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTc                                                                         <  2:223860/140‑1 (MQ=255)

                                                           agcgcTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGGCCATGACTTCCGGTACTGGTc                                                                         <  1:282969/139‑1 (MQ=255)

                                                            gcgcTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTct                                                                        >  2:10923/1‑140 (MQ=255)

                                                            gcgcTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTct                                                                        >  2:1190759/1‑140 (MQ=255)

                                                            gcgcTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTc                                                                         >  2:713332/1‑139 (MQ=255)

                                                            gcgcTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTc                                                                         <  1:713332/139‑1 (MQ=255)

                                                             cgcTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTctg                                                                       <  1:1553427/140‑1 (MQ=255)

                                                             cgcTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTctg                                                                       <  2:1501821/140‑1 (MQ=255)

                                                             cgcTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTctg                                                                       <  1:1917687/140‑1 (MQ=255)

                                                              gcTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTctgc                                                                      >  1:503929/1‑140 (MQ=255)

                                                                tGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTctgctg                                                                    <  2:2471713/140‑1 (MQ=255)

                                                                 gggCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTa                                                                               <  1:1314747/128‑1 (MQ=255)

                                                                 gggCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTa                                                                               >  2:1314747/1‑128 (MQ=255)

                                                                     gAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTc                                                               <  1:1394695/140‑1 (MQ=255)

                                                                     gAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTc                                                               <  1:2461743/140‑1 (MQ=255)

                                                                     gAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTc                                                               <  1:2101438/140‑1 (MQ=255)

                                                                     gAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTc                                                               <  2:1779897/140‑1 (MQ=255)

                                                                     gAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTc                                                               <  2:1724009/140‑1 (MQ=255)

                                                                      aaCGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTg                                                                            >  1:1537890/1‑126 (MQ=255)

                                                                      aaCGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTg                                                                            <  2:1537890/126‑1 (MQ=255)

                                                                           aaaGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCtt                                                         <  2:429253/140‑1 (MQ=255)

                                                                               gCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGc                                                     <  1:584189/140‑1 (MQ=255)

                                                                               gCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGc                                                     <  1:546265/140‑1 (MQ=255)

                                                                                 gACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCa                                                   >  1:815696/1‑140 (MQ=255)

                                                                                   ccTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACt                                                 >  2:2206956/1‑140 (MQ=255)

                                                                                   ccTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATCGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGTTACTGGTCTGCTGTACTCCACCTTCAGCCACt                                                 >  1:978292/1‑140 (MQ=255)

                                                                                   acTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACt                                                 <  2:1593529/139‑1 (MQ=255)

                                                                                       aaaaaCATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTacga                                             <  1:1750854/140‑1 (MQ=255)

                                                                                       aaaaaCATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTacga                                             <  1:1395637/140‑1 (MQ=255)

                                                                                       aaaaaCATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTacga                                             <  2:25915/140‑1 (MQ=255)

                                                                                       aaaaaCATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTacga                                             <  2:1723641/140‑1 (MQ=255)

                                                                                         aaaCATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTacgacg                                           <  1:1136798/140‑1 (MQ=255)

                                                                                           aaaTGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTacgacgac                                         <  2:533789/138‑1 (MQ=255)

                                                                                           aCATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTacgacgac                                         <  1:1149498/140‑1 (MQ=255)

                                                                                                aaTCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGacgtacg                                    <  2:1811315/140‑1 (MQ=255)

                                                                                                aaTCCAGACGGTAAAGGCCGCGTACCTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGacgtacg                                    <  2:735694/140‑1 (MQ=255)

                                                                                                 aTCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGacgtacgt                                   <  2:1226229/140‑1 (MQ=255)

                                                                                                 aTCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGacgtacgt                                   >  2:1144104/1‑140 (MQ=255)

                                                                                                 aTCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGacgtacgt                                   <  1:549980/140‑1 (MQ=255)

                                                                                                                gCCGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGt                    >  2:1392799/1‑140 (MQ=255)

                                                                                                                 ccGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTc                   <  2:1070433/140‑1 (MQ=255)

                                                                                                                 ccGCGTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTc                   <  2:870570/140‑1 (MQ=255)

                                                                                                                   gcgTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTCAg                 >  1:824860/1‑140 (MQ=255)

                                                                                                                   gcgTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTCAg                 >  1:2408514/1‑140 (MQ=255)

                                                                                                                   gcgTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGCCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTCAg                 >  1:505528/1‑140 (MQ=255)

                                                                                                                    cgTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTCAGc                >  1:2091004/1‑140 (MQ=255)

                                                                                                                    cgTACGTCTCGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTCAGc                >  1:1883562/1‑140 (MQ=255)

                                                                                                                           ctcGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTCAGCGTCAGaa         <  1:1040261/140‑1 (MQ=255)

                                                                                                                             cGACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTCCGTCCGGGTGAAGTGGGTCAGCGTCAGAACg       <  2:505528/140‑1 (MQ=255)

                                                                                                                             agACTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTCAGCGTCAGAACg       <  2:2091004/139‑1 (MQ=255)

                                                                                                                               aCTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTCAGCGTCAGAACGGc     <  2:2483974/140‑1 (MQ=255)

                                                                                                                               aCTACGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTCAGCGTCAGAACGGc     <  1:1344900/140‑1 (MQ=255)

                                                                                                                                  aCGTTATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTCAGCGTCAGAACGGCGTa  <  2:1909457/140‑1 (MQ=255)

GAGCCGTATGAAAACGTGACTCTGGACGTTGAAGAACAGCATCAGGGTTCTGTAATGCAGGCGCTGGGCGAACGTAAAGGCGACCTGAAAAACATGAATCCAGACGGTAAAGGCCGCGTACGTCTCGACTACGTGATCCCAAGCCGTGGTCTGATTGGCTTCCGTTCTGAGTTCATGACCATGACTTCCGGTACTGGTCTGCTGTACTCCACCTTCAGCCACTACGACGACGTACGTCCGGGTGAAGTGGGTCAGCGTCAGAACGGCGTA  >  NC_000913/4059598‑4059867

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A