Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A13 F48 I1 R1
|
62 |
147.6 |
5031800 |
99.1% |
4986513 |
139.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,231,855 |
C→A |
intergenic (‑224/+29) |
yjbD ← / ← lysC |
conserved protein YjbD/aspartate kinase III |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,231,855 | 0 | C | A | 100.0%
| 500.6
/ NA
| 140 | intergenic (‑224/+29) | yjbD/lysC | conserved protein YjbD/aspartate kinase III |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (66/74); total (66/74) |
Only 100 of 144 total aligned reads displayed.
ACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGC > NC_000913/4231718‑4231987
|
tttATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAatt > 2:623346/1‑139 (MQ=255)
tttATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAata > 1:938566/1‑140 (MQ=255)
ttATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAatat > 1:338106/1‑140 (MQ=255)
ttATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAatat > 2:1662952/1‑140 (MQ=255)
ttATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAatat > 2:1242465/1‑140 (MQ=255)
ttAACTCTTTCGATAAATAATTAAAGAAGCAAATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAatat < 2:2473194/140‑1 (MQ=255)
tATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAAtata < 1:1120502/140‑1 (MQ=255)
tATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAAtata < 1:1468859/140‑1 (MQ=255)
aTCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAAtatat > 2:1445192/1‑139 (MQ=255)
aTCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAg > 2:1080438/1‑140 (MQ=255)
ctctTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCt > 1:1727456/1‑140 (MQ=255)
tctTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCtt < 2:679670/140‑1 (MQ=255)
tctTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCtt < 2:2166474/140‑1 (MQ=255)
ctTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTc > 2:1578077/1‑140 (MQ=255)
tttCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTcc < 2:1634349/140‑1 (MQ=255)
tttCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTcc < 2:82460/140‑1 (MQ=255)
tttCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTcc < 2:938566/140‑1 (MQ=255)
ttCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCa < 2:1663170/140‑1 (MQ=255)
ttCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCa < 1:344034/140‑1 (MQ=255)
tCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAg > 1:1031355/1‑140 (MQ=255)
tCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAg > 2:895430/1‑140 (MQ=255)
tCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAg > 1:1206694/1‑140 (MQ=255)
tCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAg > 1:1548714/1‑140 (MQ=255)
tCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAg > 1:408286/1‑140 (MQ=255)
cGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAgg < 2:2195633/140‑1 (MQ=255)
cGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAgg < 2:610679/140‑1 (MQ=255)
aaTAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCGCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGc < 2:385288/139‑1 (MQ=255)
attaattaGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATa < 2:1072754/140‑1 (MQ=255)
attaattaGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATa < 1:738923/140‑1 (MQ=255)
attaattaGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATa < 1:393870/140‑1 (MQ=255)
attaattaGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATa < 1:967790/140‑1 (MQ=255)
attaattaGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATa < 2:1064588/140‑1 (MQ=255)
attaattaGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATa < 1:2403895/140‑1 (MQ=255)
attaattaGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATa < 1:1591544/140‑1 (MQ=255)
ttaattaGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATAc < 1:2125361/140‑1 (MQ=255)
ttaattaGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATAc < 2:232819/140‑1 (MQ=255)
agagATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTAtt < 1:632449/140‑1 (MQ=255)
gaTGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTAc > 1:1990371/1‑140 (MQ=255)
gaTGCAGATAAAAAAATTAAAGGCAAATATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTTGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTAc > 2:1760043/1‑140 (MQ=255)
aTGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACt > 2:1779901/1‑140 (MQ=255)
tGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATa > 1:300783/1‑128 (MQ=255)
tGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTc < 1:1194119/140‑1 (MQ=255)
aaaaaaaTTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTcaaacaaa > 2:788196/1‑140 (MQ=255)
aTTAAAGACAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTa > 1:1643536/1‑140 (MQ=255)
tAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATg > 2:1693216/1‑140 (MQ=255)
aaaGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGc < 1:1355689/140‑1 (MQ=255)
aGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCat > 2:2009559/1‑139 (MQ=255)
tcCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGcaccac < 1:1136856/140‑1 (MQ=255)
gCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATc > 2:373985/1‑140 (MQ=255)
gTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTcc > 2:769500/1‑139 (MQ=255)
tAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGcc < 2:1688683/140‑1 (MQ=255)
aCAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCgg > 1:2047920/1‑140 (MQ=255)
cAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCggg < 1:2206977/140‑1 (MQ=255)
aagTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCa < 2:1959083/139‑1 (MQ=255)
agTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCAc > 1:525417/1‑140 (MQ=255)
agTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCAc > 2:545154/1‑140 (MQ=255)
tACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCa > 1:842628/1‑140 (MQ=255)
tACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCa > 2:2204124/1‑140 (MQ=255)
aaGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAgg < 2:338106/139‑1 (MQ=255)
aGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGa < 1:1662952/140‑1 (MQ=255)
gCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAg > 1:2204984/1‑140 (MQ=255)
ttgTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGca < 1:1760043/138‑1 (MQ=255)
tCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGca < 2:265229/140‑1 (MQ=255)
tCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGca < 1:769500/140‑1 (MQ=255)
tCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGca < 2:421701/140‑1 (MQ=255)
tCGTTTACTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGca < 1:1733765/140‑1 (MQ=255)
cGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGcac > 2:830794/1‑140 (MQ=255)
cGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGcac > 1:842572/1‑140 (MQ=255)
cGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGcac > 2:77486/1‑140 (MQ=255)
cGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGCTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGcac > 1:1954388/1‑140 (MQ=255)
tttATTGATGAGCATAGTGACAAGAAGATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAg > 2:1762700/1‑140 (MQ=255)
tttATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAg > 2:960314/1‑140 (MQ=255)
tttATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAg > 1:17991/1‑140 (MQ=255)
tttATTGATGAGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAg > 1:2448066/1‑140 (MQ=255)
tgatgaGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTAt > 1:1043099/1‑140 (MQ=255)
tgatgaGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTAt > 2:28480/1‑140 (MQ=255)
atgaGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATgg < 2:2204984/140‑1 (MQ=255)
atgaGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATgg < 1:2201537/140‑1 (MQ=255)
atgaGCATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATgg > 1:2330743/1‑140 (MQ=255)
cATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGa < 2:525417/140‑1 (MQ=255)
cATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGa < 1:1080438/140‑1 (MQ=255)
cATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGa < 1:1445192/140‑1 (MQ=255)
cATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGa < 1:279029/140‑1 (MQ=255)
cATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGa > 2:1599297/1‑140 (MQ=255)
cATAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGa > 2:1559411/1‑140 (MQ=255)
tAGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATg < 1:1679852/140‑1 (MQ=255)
aaGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATg < 2:2047920/139‑1 (MQ=255)
aGTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATgc > 1:811650/1‑140 (MQ=255)
gTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCTCAGGTTATGGCTGGATgcg < 2:2057990/140‑1 (MQ=255)
gTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATgcg < 2:2448066/140‑1 (MQ=255)
gTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATgcg < 2:1643536/140‑1 (MQ=255)
gTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATgcg < 1:1424387/140‑1 (MQ=255)
gTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATgcg < 2:842572/140‑1 (MQ=255)
gTGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAAGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATgcg < 1:680626/140‑1 (MQ=255)
tGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATgcgc > 1:1834955/1‑140 (MQ=255)
tGACAAGAAAATCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATgcgc < 1:28480/140‑1 (MQ=255)
aaaaTCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACa > 1:2477306/1‑140 (MQ=255)
aTCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAAt > 2:1256566/1‑140 (MQ=255)
aTCAATACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAAt > 1:535036/1‑140 (MQ=255)
tACGGCCAGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAAGCATGc > 2:1544996/1‑140 (MQ=255)
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ACTATTTATCTCTTTCGATAATTAATTAGAGATGCAGATAAAAAAATTAAAGGCAATTATTCTCCGATAAAGACGCTGGTTAACAGAGTACAGGCTCGTTTATTGATGAGCATAGTGACAAGAAAATCAATACGGCCCGAAATATAGCTTCCAGGCCATACAGTATTTACTCAAACAAATTACTATGCAGTTTTTGCACCACCTGCTCGGCATCTTCGCCGGGCACCAGGAAGCACAGGTTATGGCTGGATGCGCCATAACAAATCATGC > NC_000913/4231718‑4231987
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
