Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A14 F48 I1 R1 75 141.5 4784044 99.1% 4740987 139.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,938,946 G→A Q240Q (CAG→CAA)  rbsR → DNA‑binding transcriptional dual regulator RbsR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,938,9460GA100.0% 245.6 / NA 69Q240Q (CAG→CAA) rbsRDNA‑binding transcriptional dual regulator RbsR
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (11/58);  total (11/58)

GTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCA  >  NC_000913/3938819‑3939081
                                                                                                                               |                                                                                                                                       
gTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTAcc                                                                                                                             <  1:646328/140‑1 (MQ=255)
gTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTAcc                                                                                                                             <  1:67639/140‑1 (MQ=255)
gTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTAcc                                                                                                                             <  2:1691796/140‑1 (MQ=255)
gTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTAcc                                                                                                                             <  1:486573/140‑1 (MQ=255)
      gggCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAAt                                                                                                                       <  1:870897/140‑1 (MQ=255)
        gacaggATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGa                                                                                                                     <  1:1992220/135‑1 (MQ=255)
          ggcgATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACg                                                                                                                   <  1:2062669/140‑1 (MQ=255)
            cgATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCt                                                                                                                 <  2:1166463/140‑1 (MQ=255)
                    cGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGt                                                                                                         <  1:1851524/140‑1 (MQ=255)
                         gggTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCg                                                                                                    <  1:47522/140‑1 (MQ=255)
                         gggTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCg                                                                                                    <  1:213521/140‑1 (MQ=255)
                              tcAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAc                                                                                               <  1:221308/140‑1 (MQ=255)
                               cAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAcc                                                                                              <  1:1245223/140‑1 (MQ=255)
                               cAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAcc                                                                                              <  1:1228401/140‑1 (MQ=255)
                               cAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAcc                                                                                              <  1:537248/140‑1 (MQ=255)
                               cAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAcc                                                                                              <  1:661279/140‑1 (MQ=255)
                               cAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAcc                                                                                              <  1:2319811/140‑1 (MQ=255)
                                aaCATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCa                                                                                             <  2:1800163/140‑1 (MQ=255)
                                aaCATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCa                                                                                             <  1:2222853/140‑1 (MQ=255)
                                    ttCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCGCATCCGCTGCGTCCTCAAGCCGTCTTTGCCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCg                                                                                         <  2:1244733/140‑1 (MQ=255)
                                    ttCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCg                                                                                         <  1:1305594/140‑1 (MQ=255)
                                    ttCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCg                                                                                         <  1:1106580/140‑1 (MQ=255)
                                    ttCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCg                                                                                         <  1:375147/140‑1 (MQ=255)
                                           tGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATc                                                                                  <  1:662917/140‑1 (MQ=255)
                                             gCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAg                                                                                <  1:2221004/140‑1 (MQ=255)
                                              cTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAgg                                                                               <  2:2200388/140‑1 (MQ=255)
                                              cTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAgg                                                                               <  2:583488/140‑1 (MQ=255)
                                              cTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCCCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAgg                                                                               <  2:1977127/140‑1 (MQ=255)
                                              atATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAgg                                                                               <  1:724480/139‑1 (MQ=255)
                                               tATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGc                                                                              <  1:124826/140‑1 (MQ=255)
                                                aTGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGATATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCa                                                                             <  1:2027081/140‑1 (MQ=255)
                                                aTGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCa                                                                             <  1:1027329/140‑1 (MQ=255)
                                                        aCTGGTGATTTTGAATTTAACGGTGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTAACAGGCGTTATATTAGGCAGAGATaaa                                                                     >  2:2337913/1‑138 (MQ=255)
                                                          tGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAgg                                                                   <  2:182399/140‑1 (MQ=255)
                                                          tGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAgg                                                                   <  1:693106/140‑1 (MQ=255)
                                                          tGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAgg                                                                   <  1:1614883/140‑1 (MQ=255)
                                                            gTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGtt                                                                 <  1:836676/140‑1 (MQ=255)
                                                                 tttGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCa                                                            <  2:2036165/140‑1 (MQ=255)
                                                                  ttGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAg                                                           <  1:904812/140‑1 (MQ=255)
                                                                   tGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAgg                                                          <  1:773813/140‑1 (MQ=255)
                                                                       attAAGGGAGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCCGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGatat                                                      <  2:340314/139‑1 (MQ=255)
                                                                           aCGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATcgcg                                                  <  1:1409384/140‑1 (MQ=255)
                                                                           aCGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATcgcg                                                  <  1:1058109/140‑1 (MQ=255)
                                                                           aCGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATcgcg                                                  <  2:2125449/140‑1 (MQ=255)
                                                                                 ggTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGAtt                                            <  1:1419984/140‑1 (MQ=255)
                                                                                     tGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCt                                        <  1:1004663/140‑1 (MQ=255)
                                                                                         gCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGa                                    <  1:299089/140‑1 (MQ=255)
                                                                                            aTGCGCCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGa                                 >  2:834/1‑140 (MQ=255)
                                                                                              gcgcCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGata                               <  1:2235176/140‑1 (MQ=255)
                                                                                              gcgcCAACTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGata                               <  1:1470336/140‑1 (MQ=255)
                                                                                                   aaCTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGaa                          <  1:1764186/140‑1 (MQ=255)
                                                                                                    aCTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAAc                         >  1:1772971/1‑140 (MQ=255)
                                                                                                    aCTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAAc                         <  1:2385180/140‑1 (MQ=255)
                                                                                                     cTGCTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACt                        >  2:2168677/1‑140 (MQ=255)
                                                                                                        cTATCACATCCGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGc                     <  1:1526204/140‑1 (MQ=255)
                                                                                                                 ccGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTAt            <  2:310581/140‑1 (MQ=255)
                                                                                                                  cGCTGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATg           >  1:285959/1‑140 (MQ=255)
                                                                                                                     tGCGTCCTCAAGCCGTCTTTACCGGAACTGACGCTATGGCTGTTGGCGTTTACCATGCGTTATATCAGGCAGAGTTACAGGGTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGTTTTATCACg        >  2:520666/1‑140 (MQ=255)
                                                                                                                     tGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGAcc        >  2:54797/1‑139 (MQ=255)
                                                                                                                     tGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACg        >  1:962741/1‑140 (MQ=255)
                                                                                                                     tGCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACg        >  2:2150564/1‑140 (MQ=255)
                                                                                                                      gCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGc       <  2:1412162/140‑1 (MQ=255)
                                                                                                                      gCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGc       <  1:109487/140‑1 (MQ=255)
                                                                                                                      gCGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGc       <  1:2150564/140‑1 (MQ=255)
                                                                                                                       cGTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGcc      <  1:2252900/140‑1 (MQ=255)
                                                                                                                        gTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGcca     <  1:1559850/140‑1 (MQ=255)
                                                                                                                        gTCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGcca     <  1:1728699/140‑1 (MQ=255)
                                                                                                                         tCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGccac    >  2:206911/1‑140 (MQ=255)
                                                                                                                         tCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGccac    >  1:778294/1‑140 (MQ=255)
                                                                                                                         tCCTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGccac    >  1:60432/1‑140 (MQ=255)
                                                                                                                           cTCAAGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGccacca  <  1:574996/140‑1 (MQ=255)
                                                                                                                               |                                                                                                                                       
GTTATCGGGCGGCGATGAAACGTGCGGGTCTCAACATTCCTGATGGCTATGAAGTCACTGGTGATTTTGAATTTAACGGCGGGTTTGACGCTATGCGCCAACTGCTATCACATCCGCTGCGTCCTCAGGCCGTCTTTACCGGAAATGACGCTATGGCTGTTGGCGTTTACCAGGCGTTATATCAGGCAGAGTTACAGGTTCCGCAGGATATCGCGGTGATTGGCTATGACGATATCGAACTGGCAAGCTTTATGACGCCACCA  >  NC_000913/3938819‑3939081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A