Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A14 F48 I1 R1
|
75 |
141.5 |
4784044 |
99.1% |
4740987 |
139.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,286,408 |
C→A |
A322S (GCC→TCC) |
acs ← |
acetyl‑CoA synthetase (AMP‑forming) |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,286,408 | 0 | C | A | 99.2%
| 429.4
/ ‑2.9
| 121 | A322S (GCC→TCC) | acs | acetyl‑CoA synthetase (AMP‑forming) |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (64/56); total (65/56) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.66e-01 |
Only 100 of 128 total aligned reads displayed.
TTCCGCCATCAGCGCGCGGATCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGCCAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGCGCCGCGTACACCAGATAACCGCCGG > NC_000913/4286271‑4286539
|
ttCCGCCATCAGCGCGCGGATCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGACAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACa > 1:2136556/1‑140 (MQ=255)
tCCGCCATCAGCGCGCGGATCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACat > 2:351508/1‑139 (MQ=255)
cGCCATCAGCGCGCGGATCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCg < 1:469430/140‑1 (MQ=255)
ccATCAGCGCGCGGATCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCggg > 1:655586/1‑140 (MQ=255)
ccATCAGCGCGCGGATCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCggg < 1:1698122/140‑1 (MQ=255)
tCAGCGCGCGGATCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCg < 2:1573495/140‑1 (MQ=255)
cgcgcgGATCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACa < 2:1812915/140‑1 (MQ=255)
cgcgcgGATCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACa > 1:64020/1‑140 (MQ=255)
cgGATCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCaa > 1:678418/1‑140 (MQ=255)
ggATCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAg < 2:2255941/140‑1 (MQ=255)
tCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTaa < 1:1267914/140‑1 (MQ=255)
tCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTaa < 2:764940/140‑1 (MQ=255)
tCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTaa < 1:351508/140‑1 (MQ=255)
gTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACtgtg > 1:11262/1‑140 (MQ=255)
gCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTACGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGt > 1:2318113/1‑140 (MQ=255)
cGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTc < 1:409598/140‑1 (MQ=255)
agagAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAg > 1:1635014/1‑140 (MQ=255)
agagAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAg < 2:1118568/140‑1 (MQ=255)
gagaATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGc > 2:194717/1‑140 (MQ=255)
atTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACAt > 2:1638304/1‑140 (MQ=255)
atTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACAt > 1:1857233/1‑140 (MQ=255)
atTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACAt < 1:1897572/140‑1 (MQ=255)
atTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACAt > 2:2261691/1‑140 (MQ=255)
atTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACAt > 2:780994/1‑140 (MQ=255)
atTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTAGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACAt > 2:1340895/1‑140 (MQ=255)
atTGACCTGATGCTTGTCCACCACCTGCGCCATACGGACAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACAt < 2:2136556/140‑1 (MQ=255)
tGACCTTATGCTTGTCCACCACCTGCGCCATACGTGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATcg > 2:348742/1‑140 (MQ=255)
tGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATcg > 2:268605/1‑140 (MQ=255)
tGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATcg > 1:1599661/1‑140 (MQ=255)
aCCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATcggc < 2:586832/140‑1 (MQ=255)
aCCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATcggc > 2:68602/1‑140 (MQ=255)
ccTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATcggcg > 1:873155/1‑140 (MQ=255)
ccTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATcggcg > 2:329512/1‑140 (MQ=255)
ccTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATcggcg > 2:346318/1‑140 (MQ=255)
cTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATcggcgg < 1:780994/140‑1 (MQ=255)
cTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATcggcgg < 2:1732103/140‑1 (MQ=255)
tGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGt > 2:2345177/1‑140 (MQ=255)
tGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGGCACCCAGCCCACATCGGCGGt > 1:2264535/1‑140 (MQ=255)
gATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCGCCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTg < 2:678418/140‑1 (MQ=255)
gATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTg < 2:1587973/140‑1 (MQ=255)
gATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTg < 1:2261691/140‑1 (MQ=255)
aTGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGc > 2:1031566/1‑140 (MQ=255)
aTGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGc > 1:2202498/1‑140 (MQ=255)
aTGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGc > 1:1101372/1‑140 (MQ=255)
aTGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGc < 1:687876/140‑1 (MQ=255)
aTGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGc > 1:2287780/1‑140 (MQ=255)
tGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTTGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCa < 2:64020/140‑1 (MQ=255)
tGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCa < 2:1635014/140‑1 (MQ=255)
tGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCa < 2:305103/140‑1 (MQ=255)
gCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCAc < 1:48322/140‑1 (MQ=255)
gCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCAc < 1:2355151/140‑1 (MQ=255)
ttGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCa < 1:1330357/140‑1 (MQ=255)
tGTCCACCGCCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAg < 2:2121400/140‑1 (MQ=255)
gTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCaat > 1:1735710/1‑138 (MQ=255)
ccTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCa > 2:1096/1‑140 (MQ=255)
cTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCAc < 1:329512/140‑1 (MQ=255)
cATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTCCAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGgat < 2:2264535/140‑1 (MQ=255)
aTACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGgatg > 1:2369670/1‑140 (MQ=255)
aTACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGgatg > 1:1947751/1‑140 (MQ=255)
tACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGgatga < 2:1668261/140‑1 (MQ=255)
tACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGgatga > 1:1871657/1‑140 (MQ=255)
tACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGgatga > 1:707737/1‑140 (MQ=255)
aaCGGGCAGGCGTCGGCCAGTTGGGTTCGCCCTCAAACATCAGCGTGGTCGCCCCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGgatga < 2:1854455/139‑1 (MQ=255)
aCGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGgatgat > 1:1010380/1‑140 (MQ=255)
gggCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATaa > 1:2346760/1‑140 (MQ=255)
gCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATc > 1:1639280/1‑140 (MQ=255)
cAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCa > 1:2023727/1‑140 (MQ=255)
cAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAATAGATATCACCCGGATGATAATCa < 2:1735710/140‑1 (MQ=255)
ggCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCaaa < 1:348742/140‑1 (MQ=255)
ggCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCaaa > 1:350913/1‑140 (MQ=255)
cGTCGGTCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCTCCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGa > 2:1613776/1‑140 (MQ=255)
cGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGa > 1:1648415/1‑140 (MQ=255)
cGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGa > 2:1514488/1‑140 (MQ=255)
cGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGa > 2:1389592/1‑140 (MQ=255)
gTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGAc < 2:707737/140‑1 (MQ=255)
gTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGAc < 1:1389592/140‑1 (MQ=255)
tCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACa < 1:1096/140‑1 (MQ=255)
cGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACat < 1:1514488/140‑1 (MQ=255)
aGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTa < 2:1599661/140‑1 (MQ=255)
tACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCa < 2:699095/140‑1 (MQ=255)
gCCTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAgcg < 2:2202498/140‑1 (MQ=255)
tttCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGcgcc < 2:1727789/139‑1 (MQ=255)
cTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGcgcc > 2:303371/1‑140 (MQ=255)
cTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGcgcc < 1:1738078/140‑1 (MQ=255)
cTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGcgcc > 1:2218394/1‑140 (MQ=255)
cTTCAAACATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGcgcc > 1:317900/1‑140 (MQ=255)
cAAACATCAGCGTGGTAGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGCGCcgcg < 1:1340895/140‑1 (MQ=255)
aaCATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGCGCCGCGTa < 1:856277/140‑1 (MQ=255)
aaCATCAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGCGCCGCGTa < 1:2345177/140‑1 (MQ=255)
cAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGCGCCGCGTACACCa > 1:461880/1‑140 (MQ=255)
cAGCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGGCAGCGCCGCGTACACCa > 2:2079556/1‑140 (MQ=255)
gCGTGGTCGCACCGCAGGCCAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGGGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGCGCCGCGTACACCAGa > 1:870002/1‑140 (MQ=255)
gCGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGCGCCGCGTACACCAGa > 1:1522030/1‑140 (MQ=255)
cGTGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGCGCCGCGTACACCAGAt > 1:1734481/1‑140 (MQ=255)
tGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCTAAGACATATTTAAAGGTCAGCGCCGCGTACACCAGATaa > 1:706109/1‑140 (MQ=255)
tGGTCGCACCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGCGCCGCGTACACCAGATaa > 1:683608/1‑140 (MQ=255)
ccccccGCAGGACGGCGGGCCGAACAGAAATTAACTGTGTCCGGTCACCAAGCCCACATCGGGGGTGCACAAGTAGATACCCCCGGGATGATAATAAAAGACATATTAAAAGGTCAGCGCCGCGTACACCAGAAAAccgc < 2:1101372/136‑1 (MQ=255)
cGCACCGCAGGACAGGGGGCCGAACAGAAAGTAACTGTGCCCGGTCCCCCAGCCAACAGCGGCGGTGCACAAGTAGATATCCCCGGGATGATAATAAAAGACATATTAAAAGGTCAGCGCCGCGTACACCAAATAAccgc < 2:873155/140‑1 (MQ=255)
aaCCGCAGGACAGCGGGCCGTACAGCAAGTAACTGTGCCCGGTCACCCAGCCCACATGGGCGGTGCACCAGTAGATATCCCCCGGATGATAATAAAAGACATTTTTAAAGGTCAGCGCCGCGTACCCCAGATAAccgccg < 2:1380551/139‑1 (MQ=255)
aCCGCAGGACAGGGGGCCGTACAGAAAGAAACTGTGTCCGGTCACCCACCCCAAATCGGGGGTCCACCAGTAGATACCCCCCGATTGATAATAAAAAAAATATTAAAGGGTCAGCGCCGCGTCCACCAGAAAACCGCCgg < 2:461880/140‑1 (MQ=255)
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TTCCGCCATCAGCGCGCGGATCGCCGTGGGTGCGGTATAGAGAATATTGACCTGATGCTTGTCCACCACCTGCGCCATACGGGCAGGCGTCGGCCAGTTGGGTACGCCTTCAAACATCAGCGTGGTCGCACCGCAGGCCAGCGGGCCGTACAGCAAGTAACTGTGTCCGGTCACCCAGCCCACATCGGCGGTGCACCAGTAGATATCACCCGGATGATAATCAAAGACATATTTAAAGGTCAGCGCCGCGTACACCAGATAACCGCCGG > NC_000913/4286271‑4286539
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
