Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A15 F48 I1 R1 115 87.5 3003888 99.1% 2976853 139.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,542,452 G→T G682G (GGG→GGT)  feoB → Fe(2(+)) transporter FeoB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,542,4520GT100.0% 290.6 / NA 83G682G (GGG→GGT) feoBFe(2(+)) transporter FeoB
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (46/37);  total (46/37)

TTGAAGCCAGCAAAGGCGACGGCGAAATGGGTACCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGGGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAGCCTGGTGTGCA  >  NC_000913/3542316‑3542588
                                                                                                                                        |                                                                                                                                        
ttGAAGCCAGCAAAGGCGACGGCGAAATGGGTACCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCt                                                                                                                                       >  1:1370815/1‑140 (MQ=255)
    aGCCAGCAAAGGCGACGGCGAAATGGGTACCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCg                                                                                                                                   <  1:9266/140‑1 (MQ=255)
     gCCAGCAAAGGCGACGGCGAAATGGGTACCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTAACTCGGTGATGGGTGCTATCGc                                                                                                                                  >  2:1193267/1‑140 (MQ=255)
      ccAGCAAAGGCGACGGCGAAATGGGTACCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGcc                                                                                                                                 >  1:156926/1‑140 (MQ=255)
       cAGCAAAGGCGACGGCGAAATGGGTACCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGccc                                                                                                                                <  2:639978/140‑1 (MQ=255)
          cAAAGGCGACGGCGAAATGGGTACCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTg                                                                                                                             >  1:682420/1‑140 (MQ=255)
                   aggCGAAATGGGTACCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGcc                                                                                                                    <  2:682420/139‑1 (MQ=255)
                         aaTGGGTACCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCt                                                                                                              >  1:510603/1‑140 (MQ=255)
                                aCCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATggg                                                                                                       <  2:320135/140‑1 (MQ=255)
                                aCCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATggg                                                                                                       <  1:49226/140‑1 (MQ=255)
                                  cGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCt                                                                                                     >  2:212897/1‑140 (MQ=255)
                                     ggCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTGCCTGATTTTCGTCCTGCTGTATGTTCCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTtct                                                                                                  <  2:649988/140‑1 (MQ=255)
                                         aTGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCAt                                                                                              >  2:462796/1‑140 (MQ=255)
                                           gggCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATcc                                                                                            >  2:1232311/1‑140 (MQ=255)
                                              cGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCtgt                                                                                         <  2:461777/140‑1 (MQ=255)
                                                tGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTgg                                                                                       >  2:562477/1‑140 (MQ=255)
                                                  aTGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTgggg                                                                                     >  1:411563/1‑140 (MQ=255)
                                                   tGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTggggg                                                                                    <  1:898279/140‑1 (MQ=255)
                                                               tCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCt                                                                        <  2:411563/140‑1 (MQ=255)
                                                                cGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCtt                                                                       >  1:1019546/1‑140 (MQ=255)
                                                                cGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCtt                                                                       >  1:1090544/1‑140 (MQ=255)
                                                                 ggTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAat                                                                              >  1:493454/1‑132 (MQ=255)
                                                                 ggTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAat                                                                              <  2:493454/132‑1 (MQ=255)
                                                                  gTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTAc                                                                     >  2:54825/1‑140 (MQ=255)
                                                                     gcgcAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCa                                                                  >  2:1402685/1‑140 (MQ=255)
                                                                         agcagcagcTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTgg                                                              <  1:13055/140‑1 (MQ=255)
                                                                           cagcagcTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCa                                                            <  1:1402685/140‑1 (MQ=255)
                                                                             gcagcTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAAc                                                          <  1:312872/140‑1 (MQ=255)
                                                                             gcagcTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAAc                                                          <  2:1370815/140‑1 (MQ=255)
                                                                             acagcTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAAc                                                          <  2:388280/139‑1 (MQ=255)
                                                                              cagcTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACa                                                         <  2:156926/140‑1 (MQ=255)
                                                                              cagcTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACa                                                         <  1:212897/140‑1 (MQ=255)
                                                                              cagcTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACa                                                         <  2:510603/140‑1 (MQ=255)
                                                                               agcTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACAt                                                        <  1:1004066/140‑1 (MQ=255)
                                                                                     cAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCt                                                  >  2:1351232/1‑140 (MQ=255)
                                                                                           ccTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAgg                                            >  2:1473871/1‑140 (MQ=255)
                                                                                           ccTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAgg                                            >  2:687117/1‑140 (MQ=255)
                                                                                            cTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGt                                           >  2:1421094/1‑140 (MQ=255)
                                                                                             tGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTc                                          <  2:831383/140‑1 (MQ=255)
                                                                                             tGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTc                                          <  1:462796/140‑1 (MQ=255)
                                                                                                ttttCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGcc                                       <  2:79975/140‑1 (MQ=255)
                                                                                                     gTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTa                                  >  1:366139/1‑140 (MQ=255)
                                                                                                     gTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTa                                  <  2:58493/140‑1 (MQ=255)
                                                                                                     gTCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTa                                  <  2:1295985/140‑1 (MQ=255)
                                                                                                      tCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTAc                                 >  1:1115049/1‑140 (MQ=255)
                                                                                                      tCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTAc                                 <  1:390032/140‑1 (MQ=255)
                                                                                                      tCCTGCTGTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTAc                                 <  1:568370/140‑1 (MQ=255)
                                                                                                         tgctgTATGTACCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGt                              <  2:366139/140‑1 (MQ=255)
                                                                                                                tgtaCCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATc                       <  1:871035/140‑1 (MQ=255)
                                                                                                                 gtaCCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATcc                      <  1:1421094/140‑1 (MQ=255)
                                                                                                                  taCCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCa                     <  1:1473871/140‑1 (MQ=255)
                                                                                                                   aCCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCaa                    >  1:571429/1‑140 (MQ=255)
                                                                                                                   aCCATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCaa                    >  1:1433392/1‑140 (MQ=255)
                                                                                                                     cATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGTCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACt                  >  2:1117577/1‑140 (MQ=255)
                                                                                                                     cATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACt                  >  2:1467847/1‑140 (MQ=255)
                                                                                                                     cATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACt                  >  1:399919/1‑140 (MQ=255)
                                                                                                                     cATGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACt                  >  2:133799/1‑140 (MQ=255)
                                                                                                                      aTGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACtt                 <  1:562477/140‑1 (MQ=255)
                                                                                                                       tGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTa                <  2:1090544/140‑1 (MQ=255)
                                                                                                                       tGTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTa                >  2:936745/1‑140 (MQ=255)
                                                                                                                        gTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTAc               >  2:238619/1‑140 (MQ=255)
                                                                                                                        gTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTAc               >  1:372989/1‑140 (MQ=255)
                                                                                                                        gTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTAc               >  2:709082/1‑140 (MQ=255)
                                                                                                                        gTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTAc               >  2:695434/1‑140 (MQ=255)
                                                                                                                        gTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTAc               >  1:267235/1‑140 (MQ=255)
                                                                                                                        gTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTAc               >  2:219532/1‑140 (MQ=255)
                                                                                                                        gTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTAc               >  1:867374/1‑140 (MQ=255)
                                                                                                                        gTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTAc               >  1:1459950/1‑140 (MQ=255)
                                                                                                                        gTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTAc               >  1:120630/1‑140 (MQ=255)
                                                                                                                        gTATCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTAc               >  1:1351816/1‑140 (MQ=255)
                                                                                                                          aTCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAg             >  2:1478049/1‑140 (MQ=255)
                                                                                                                          aTCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAg             >  1:908891/1‑140 (MQ=255)
                                                                                                                          aTCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAg             >  2:414639/1‑140 (MQ=255)
                                                                                                                          aTCTCGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAg             >  2:1256846/1‑140 (MQ=255)
                                                                                                                           tctcGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAGc            <  1:414639/140‑1 (MQ=255)
                                                                                                                           actcGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAGc            <  2:816405/139‑1 (MQ=255)
                                                                                                                            ctcGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAGcc           >  1:1039994/1‑140 (MQ=255)
                                                                                                                            ctcGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAGcc           <  2:267235/140‑1 (MQ=255)
                                                                                                                             tcGGTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAGCCt          <  1:208552/140‑1 (MQ=255)
                                                                                                                               ggTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTa                <  2:1356519/132‑1 (MQ=255)
                                                                                                                               ggTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTa                >  1:1356519/1‑132 (MQ=255)
                                                                                                                               ggTGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAGCCTgg        >  2:227686/1‑140 (MQ=255)
                                                                                                                                 tGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAGCCTGgtt      >  2:226197/1‑139 (MQ=255)
                                                                                                                                 tGATGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAGCCTGgtg      >  2:1408738/1‑140 (MQ=255)
                                                                                                                                   aTGGGTGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAGCCTGGtgtg    <  1:1256846/140‑1 (MQ=255)
                                                                                                                                     gggtgCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAGCCTGGTGTGCa  >  2:729727/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                        
TTGAAGCCAGCAAAGGCGACGGCGAAATGGGTACCGGGGCGATGGGCGTGATGGATCAGAAATTCGGTAGCGCAGCAGCAGCTTACAGCTACCTGATTTTCGTCCTGCTGTATGTACCATGTATCTCGGTGATGGGGGCTATCGCCCGTGAATCAAGCCGTGGCTGGATGGGCTTCTCCATCCTGTGGGGGCTGAATATCGCTTACTCACTGGCAACATTGTTCTATCAGGTCGCCAGCTACAGTCAGCATCCAACTTACAGCCTGGTGTGCA  >  NC_000913/3542316‑3542588

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A