Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A15 F48 I1 R1	115	87.5	3003888	99.1%	2976853	139.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,116,835	C→A	G130C (GGT→TGT)	glpK ←	glycerol kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,116,835	0	C	A	100.0%	312.3 / NA	87	G130C (GGT→TGT)	glpK	glycerol kinase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (40/47); total (40/47)

TCATTTTCCAGATAAGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACCGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGTTTCTTTTTCCCAGACAATAGTGGTTTCA  >  NC_000913/4116700‑4116971

tCATTTTCCAGATAAGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGGACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTa                                                                                                                                      <  2:1241351/140‑1 (MQ=255)

tCATTTTCCAGATAAGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTa                                                                                                                                      <  1:183356/140‑1 (MQ=255)

   ttttCCAGATAAGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTAttt                                                                                                                                   >  2:376305/1‑139 (MQ=255)

   ttttCCAGATAAGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTAttt                                                                                                                                   >  2:540148/1‑139 (MQ=255)

   ttttCCAGATAAGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATtg                                                                                                                                   >  1:533306/1‑140 (MQ=255)

     ttCCAGATAAGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCAACAGACAGGTATtgct                                                                                                                                 <  1:991950/140‑1 (MQ=255)

      tCCAGATAAGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATtgctg                                                                                                                                <  2:880072/140‑1 (MQ=255)

         aGATAAGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCgg                                                                                                                             <  1:56429/140‑1 (MQ=255)

           aTAAGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGat                                                                                                                           <  1:376305/140‑1 (MQ=255)

            tAAGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGATAGGTATTGCTGCGGata                                                                                                                          <  2:1036091/140‑1 (MQ=255)

             aaGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGatat                                                                                                                         >  2:135831/1‑140 (MQ=255)

              aGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGAtata                                                                                                                        <  2:1354379/140‑1 (MQ=255)

              aGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGAtata                                                                                                                        <  2:1098149/140‑1 (MQ=255)

                        cAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTaaa                                                                                                              <  1:531471/140‑1 (MQ=255)

                         aaCCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAAc                                                                                                             >  2:26723/1‑140 (MQ=255)

                          aCCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAAcc                                                                                                            >  2:390114/1‑140 (MQ=255)

                            cGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGt                                                                                                          <  2:1236746/140‑1 (MQ=255)

                            cGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGt                                                                                                          <  1:986182/140‑1 (MQ=255)

                            cGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGt                                                                                                          <  1:540148/140‑1 (MQ=255)

                              tACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCa                                                                                                        >  2:681580/1‑140 (MQ=255)

                              tACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCa                                                                                                        >  2:1120282/1‑140 (MQ=255)

                              tACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCa                                                                                                        >  2:772318/1‑140 (MQ=255)

                              tACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCa                                                                                                        <  1:1225241/140‑1 (MQ=255)

                              tACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCa                                                                                                        >  2:307849/1‑140 (MQ=255)

                               aCCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCAc                                                                                                       >  1:632685/1‑140 (MQ=255)

                               aCCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCAc                                                                                                       >  2:1014392/1‑140 (MQ=255)

                                   aaCAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGttt                                                                                                   >  2:825408/1‑140 (MQ=255)

                                        cAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAAt                                                                                              <  1:1077931/140‑1 (MQ=255)

                                        cAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAAt                                                                                              >  1:857167/1‑140 (MQ=255)

                                        cAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAAACACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCAc                                                                                                       <  2:843502/131‑1 (MQ=255)

                                        cAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAAACACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCAc                                                                                                       >  1:843502/1‑131 (MQ=255)

                                           ttCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCt                                                                                           >  1:868440/1‑140 (MQ=255)

                                             caccacGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCg                                                                                         >  2:951250/1‑140 (MQ=255)

                                             caccacGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCg                                                                                         <  2:834672/140‑1 (MQ=255)

                                                  cgacgTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGAt                                                                                    >  2:396718/1‑140 (MQ=255)

                                                     cgTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTc                                                                                 >  1:1000846/1‑140 (MQ=255)

                                                        gCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGc                                                                              >  1:908128/1‑140 (MQ=255)

                                                         cACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCg                                                                             <  1:974535/140‑1 (MQ=255)

                                                          aCGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCgg                                                                            >  2:1400536/1‑140 (MQ=255)

                                                              tCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTacg                                                                        >  1:706065/1‑140 (MQ=255)

                                                               cgcgAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTacga                                                                       >  1:431665/1‑140 (MQ=255)

                                                                gcgAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTacgac                                                                      <  1:919700/140‑1 (MQ=255)

                                                                  gagaGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACgg                                                                    <  1:653698/140‑1 (MQ=255)

                                                                  gagaGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACgg                                                                    <  1:26723/140‑1 (MQ=255)

                                                                          tCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCa                                                            <  1:681580/140‑1 (MQ=255)

                                                                          tCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCa                                                            <  2:868440/140‑1 (MQ=255)

                                                                               aTGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACaa                                                       <  2:431665/140‑1 (MQ=255)

                                                                                 ggTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATg                                                     >  2:665347/1‑140 (MQ=255)

                                                                                 ggTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATg                                                     >  2:531550/1‑140 (MQ=255)

                                                                                 ggTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATg                                                     <  2:908128/140‑1 (MQ=255)

                                                                                 ggTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATg                                                     <  1:92331/140‑1 (MQ=255)

                                                                                 ggTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATg                                                     <  1:1014392/140‑1 (MQ=255)

                                                                                 ggTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATg                                                     <  1:951250/140‑1 (MQ=255)

                                                                                 ggTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATg                                                     <  1:1120282/140‑1 (MQ=255)

                                                                                 ggTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATg                                                     <  1:1274639/140‑1 (MQ=255)

                                                                                 ggTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATg                                                     <  1:531550/140‑1 (MQ=255)

                                                                                 ggTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATg                                                     <  1:1400536/140‑1 (MQ=255)

                                                                                    cGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCg                                                  <  2:1326802/140‑1 (MQ=255)

                                                                                    cGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCg                                                  <  1:396718/140‑1 (MQ=255)

                                                                                     gAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGt                                                 >  1:1020884/1‑140 (MQ=255)

                                                                                     gAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGt                                                 <  1:1101366/140‑1 (MQ=255)

                                                                                     gAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGt                                                 <  2:706065/140‑1 (MQ=255)

                                                                                      aGGATCCACTTCACTTTGGTGGCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGtt                                                <  1:85968/140‑1 (MQ=255)

                                                                                      aGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGtt                                                <  2:632685/140‑1 (MQ=255)

                                                                                          tCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTatag                                            >  1:993035/1‑140 (MQ=255)

                                                                                             acttcacttTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTatagata                                         >  1:1441415/1‑140 (MQ=255)

                                                                                             acttcacttTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGCACGACGGCACTGCCAGACAATGGCGTTatagata                                         >  1:167163/1‑140 (MQ=255)

                                                                                                  acttTGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCtt                                    >  1:1290190/1‑140 (MQ=255)

                                                                                                     ttGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGcc                                 >  2:298696/1‑140 (MQ=255)

                                                                                                     ttGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTGCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGAATGACGGCACTGCGAGACAATGGCGTTATAGATAGGCTTGcc                                 >  2:1023226/1‑140 (MQ=255)

                                                                                                      tGGTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCg                                >  1:370975/1‑140 (MQ=255)

                                                                                                        gTGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGt                              <  2:17100/140‑1 (MQ=255)

                                                                                                         tGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGtt                             >  1:1447358/1‑140 (MQ=255)

                                                                                                         tGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGtt                             >  1:375553/1‑140 (MQ=255)

                                                                                                         tGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGtt                             >  1:1120168/1‑140 (MQ=255)

                                                                                                         tGCCAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGtt                             >  1:796623/1‑140 (MQ=255)

                                                                                                           ccAGAAAAGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGTTTc                           >  1:1022659/1‑140 (MQ=255)

                                                                                                                 aaGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGTTTCTTTTTc                     <  1:390114/140‑1 (MQ=255)

                                                                                                                 aaGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGTTTCTTTTTc                     <  1:665347/140‑1 (MQ=255)

                                                                                                                 aaGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGTTTCTTTTTc                     <  2:1022659/140‑1 (MQ=255)

                                                                                                                  aGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTTCGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGTTTCTTTTTcc                    <  2:592940/140‑1 (MQ=255)

                                                                                                                  aGTACGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGTTTCTTTTTcc                    <  2:172826/140‑1 (MQ=255)

                                                                                                                      cGGGTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGTTTCTTTTTCCCAGa                <  1:135831/140‑1 (MQ=255)

                                                                                                                       gggTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGTTTCTTTTTCCCAGAc               <  1:1397350/140‑1 (MQ=255)

                                                                                                                       gggTCAATCACCAGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGTTTCTTTTTCCCAGAc               <  2:1337030/140‑1 (MQ=255)

                                                                                                                                   aGACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGTTTCTTTTTCCCAGACAATAGTGGTTTc   >  1:1164784/1‑140 (MQ=255)

                                                                                                                                    gACAGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGTTTCTTTTTCCCAGACAATAGTGGTTTCa  >  2:118017/1‑140 (MQ=255)

TCATTTTCCAGATAAGCCACGTATCAACCGTACCAAACAGCAATTCACCACGACGTGCACGCTCGCGAGAGCCTTCCACATGGTCGAGGATCCACTTCACTTTGGTGCCAGAAAAGTACGGGTCAATCACCAGACCGGTATTGCTGCGGATATAATCTTCTAAACCGTCACGTTTTAAATGCTCGCAGATTTCTGCGGTACGACGGCACTGCCAGACAATGGCGTTATAGATAGGCTTGCCGGTTTCTTTTTCCCAGACAATAGTGGTTTCA  >  NC_000913/4116700‑4116971

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A