Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A15 F48 I1 R1
|
115 |
87.5 |
3003888 |
99.1% |
2976853 |
139.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,364,950 |
G→A |
V31V (GTC→GTT) |
dsbD ← |
protein disulfide oxidoreductase ‑ DsbDreduced |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,364,950 | 0 | G | A | 100.0%
| 304.1
/ NA
| 85 | V31V (GTC→GTT) | dsbD | protein disulfide oxidoreductase ‑ DsbDreduced |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (48/37); total (48/37) |
CGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAGAA > NC_000913/4364817‑4365085
|
cGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAAt > 1:692663/1‑140 (MQ=255)
ggCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAAtt < 1:961759/140‑1 (MQ=255)
gCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATtg > 2:304480/1‑140 (MQ=255)
gtgtTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCg < 2:491206/140‑1 (MQ=255)
ttCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTACTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGgcg < 2:781784/140‑1 (MQ=255)
ccGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGcgcg < 2:973673/140‑1 (MQ=255)
ccGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGcgcg > 1:556351/1‑140 (MQ=255)
aTGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGaataa > 2:195772/1‑140 (MQ=255)
tGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGaataat > 1:599166/1‑140 (MQ=255)
aCGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACgg < 1:195772/140‑1 (MQ=255)
aCGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACgg < 1:203600/140‑1 (MQ=255)
ggTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGaa > 2:301793/1‑140 (MQ=255)
gTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAg < 1:448102/140‑1 (MQ=255)
gagGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGtgt > 2:65314/1‑139 (MQ=255)
agGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGtgct > 1:383308/1‑140 (MQ=255)
agGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGtgct > 1:996485/1‑140 (MQ=255)
gtagtaACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGtgctgc > 1:927117/1‑140 (MQ=255)
tagtaACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCa < 2:235201/140‑1 (MQ=255)
tagtaACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCa < 2:556351/140‑1 (MQ=255)
tagtaACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCa < 1:1020890/140‑1 (MQ=255)
gtaACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCaaa > 2:408861/1‑140 (MQ=255)
gtaACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCaaa > 2:876445/1‑140 (MQ=255)
gtaACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCa > 2:1271692/1‑138 (MQ=255)
gtaACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCa < 1:1271692/138‑1 (MQ=255)
aaCCGTCTTTGATCTGCCAGGTCAGATTATGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCAGGCGCGTCGAATAATCTGGCAAAAACGGAAGTGCTGCAAAGt > 2:160067/1‑140 (MQ=255)
ccGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAg > 2:476088/1‑140 (MQ=255)
ccGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAg < 1:626893/140‑1 (MQ=255)
gTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCa > 2:693276/1‑140 (MQ=255)
tCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAg > 2:1311369/1‑140 (MQ=255)
tttGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGa > 1:580271/1‑140 (MQ=255)
tttGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGa > 2:387624/1‑140 (MQ=255)
ttGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGAt < 1:359731/140‑1 (MQ=255)
ttGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGAt < 1:53572/140‑1 (MQ=255)
ttGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGAt < 2:1026471/140‑1 (MQ=255)
ttGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGAt < 1:476088/140‑1 (MQ=255)
ttGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGAt < 2:1018690/140‑1 (MQ=255)
gATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCa < 2:599166/140‑1 (MQ=255)
tCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGc > 2:1191593/1‑140 (MQ=255)
ccAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTaa > 1:1181304/1‑140 (MQ=255)
ccAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTaa > 2:270324/1‑140 (MQ=255)
ccAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTaa > 1:299642/1‑140 (MQ=255)
gATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGt > 2:77038/1‑140 (MQ=255)
aTTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGtt > 2:386613/1‑140 (MQ=255)
ttAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTg > 1:1129529/1‑140 (MQ=255)
ggTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGcc > 1:889370/1‑140 (MQ=255)
ggTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGcc > 1:1039217/1‑140 (MQ=255)
ggTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGcc > 1:1052096/1‑140 (MQ=255)
ggTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGcc < 1:360610/140‑1 (MQ=255)
ggTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGcc > 2:1440936/1‑140 (MQ=255)
tCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCAt < 1:1191593/140‑1 (MQ=255)
cATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATg < 1:879682/140‑1 (MQ=255)
cATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATg < 1:1172264/140‑1 (MQ=255)
tGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATgag > 1:909670/1‑140 (MQ=255)
tGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATgag > 1:363803/1‑140 (MQ=255)
tGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATgag > 2:90041/1‑140 (MQ=255)
tGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATgag > 1:1300889/1‑140 (MQ=255)
tGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATgag > 1:79990/1‑140 (MQ=255)
tGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATgag > 2:372866/1‑140 (MQ=255)
tGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATgag > 2:626296/1‑140 (MQ=255)
tGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAgg < 2:363803/140‑1 (MQ=255)
ggTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAgg > 1:60432/1‑139 (MQ=255)
ggTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAgg < 2:60432/139‑1 (MQ=255)
gTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGCTGAGACATGAGATGTa > 2:187885/1‑140 (MQ=255)
ttttGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTaa > 2:958726/1‑140 (MQ=255)
tGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCAt < 2:1116411/128‑1 (MQ=255)
tGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCAt > 1:1116411/1‑128 (MQ=255)
tGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCt < 2:299642/140‑1 (MQ=255)
tGCTGAAAAACAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCt < 1:49006/140‑1 (MQ=255)
tGAAAATCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCtgtt > 2:557110/1‑139 (MQ=255)
aaaTCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGtct < 1:387624/140‑1 (MQ=255)
aaaTCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGtct < 2:996485/140‑1 (MQ=255)
aaaTCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGtct < 2:383308/140‑1 (MQ=255)
aTCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTcc < 2:79990/140‑1 (MQ=255)
tCAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGATGTAATCTGTGTCTCCg < 1:77038/140‑1 (MQ=255)
acAAAAGCAAAGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCg < 2:580271/139‑1 (MQ=255)
aaGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGtct < 1:936486/128‑1 (MQ=255)
aaGGCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGtct > 2:936486/1‑128 (MQ=255)
gCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGt < 1:270324/140‑1 (MQ=255)
gCTTGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGt < 1:408861/140‑1 (MQ=255)
tGATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTaaa < 1:802850/140‑1 (MQ=255)
gATCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTaaaa > 1:719850/1‑140 (MQ=255)
aTCCGCGGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAAc > 1:1469013/1‑140 (MQ=255)
cgGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAGaa > 2:613137/1‑140 (MQ=255)
cgGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAGaa > 2:942498/1‑140 (MQ=255)
cgGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAGaa > 1:717478/1‑140 (MQ=255)
cgGGAACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAGaa > 1:1006220/1‑140 (MQ=255)
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CGGCAATTTTCGCGTGTTCCGGCGTAATGCGGATCTGTTTACGGTAGAGGTAGTAACCGTCTTTGATCTGCCAGGTCAGATTAAGGTCATGTTGGTTTTGCTGAAAATCAAAAGCAAAGGCTTGATCCGCGGGGACAAATTGTGAACGTCCCGGCGCGTCGAATAATCCGGCAAAAACGGAAGTGCTGCAAAGTAGCAGGATCAGCGTAAAGATGCGTTGAGCCATGAGAGGTAATCTGTGTCTCCGTGTGTAACAGGTAAAACCAGAA > NC_000913/4364817‑4365085
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
