Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,059,554 |
G→T |
pseudogene (58/231 nt) |
yqfE ← |
conserved protein YqfE |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,059,554 | 0 | G | T | 100.0%
| 499.4
/ NA
| 146 | pseudogene (58/231 nt) | yqfE | conserved protein YqfE |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (77/69); total (77/69) |
Only 100 of 151 total aligned reads displayed.
CATAAAATATCGCGCAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGGCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTAT > NC_000913/3059417‑3059686
|
cATAAAATATCGCGCAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCa > 2:869085/1‑140 (MQ=255)
cATAAAATATCGCGCAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCa > 2:1512223/1‑140 (MQ=255)
cATAAAATATCGCGCAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCa > 2:132185/1‑140 (MQ=255)
cATAAAATATCGCGCAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCa > 2:246915/1‑140 (MQ=255)
tAAAATATCGCGCAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAAt < 1:1167308/140‑1 (MQ=255)
tCGCGCAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAacgcca < 1:915755/140‑1 (MQ=255)
tCGCGCAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAacgcca > 1:65848/1‑140 (MQ=255)
tCGCGCAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAacgcca < 1:2127562/140‑1 (MQ=255)
cgcgCAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGTAAGCCCCTGTTTACAGGCAAATTGAGTCAATAacgccac > 2:224544/1‑140 (MQ=255)
cgcgCAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAacgccac > 1:220399/1‑140 (MQ=255)
gcgcAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAacgccacg < 1:955703/140‑1 (MQ=255)
gcgcAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAacgccacg < 2:1764080/140‑1 (MQ=255)
gcgcAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAacgccacg > 1:584937/1‑140 (MQ=255)
cgcAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAacgccacgc > 1:22747/1‑140 (MQ=255)
cgcAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAacgccacgc > 2:1812630/1‑140 (MQ=255)
cgcAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAacgccacgc > 1:1345160/1‑140 (MQ=255)
cgcAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTACACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAacgccacgc > 2:1672672/1‑140 (MQ=255)
cgcAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCACTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAacgccacgc > 1:1720478/1‑140 (MQ=255)
aaTGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCAt < 1:1401321/140‑1 (MQ=255)
aTGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCAtt > 1:1803185/1‑140 (MQ=255)
gcaggcaTCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCaa < 1:1512223/140‑1 (MQ=255)
gcaggcaTCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCaa < 2:783868/140‑1 (MQ=255)
ccccTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCa > 2:1978643/1‑140 (MQ=255)
ccccTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCa > 1:1543777/1‑140 (MQ=255)
cccTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGCATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAg > 2:2091624/1‑140 (MQ=255)
cTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAggg < 1:823747/140‑1 (MQ=255)
tCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGgcgc > 2:325985/1‑140 (MQ=255)
gCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGa > 2:736516/1‑140 (MQ=255)
cccGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAAc > 2:39876/1‑140 (MQ=255)
cccGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAAc < 1:869085/140‑1 (MQ=255)
cGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTc > 2:1831412/1‑140 (MQ=255)
cAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGc > 2:808788/1‑140 (MQ=255)
aaGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCg < 2:22747/140‑1 (MQ=255)
tACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATg > 2:1084286/1‑140 (MQ=255)
cAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCa > 1:1169507/1‑140 (MQ=255)
aaCGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCAt < 2:584937/140‑1 (MQ=255)
aaCGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCAt < 2:65848/140‑1 (MQ=255)
aaCGGTCTGGGTATGCCACTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCAt < 2:1720478/140‑1 (MQ=255)
cGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTa < 1:1084286/140‑1 (MQ=255)
ggTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTa > 1:23501/1‑139 (MQ=255)
tCTGGGTATGCCGCTCCACGGTGCAAACAGGTGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAgcg > 1:2067797/1‑140 (MQ=255)
tCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAgcg > 1:1299127/1‑140 (MQ=255)
tCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAgcg > 2:275031/1‑140 (MQ=255)
tCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAgcg > 2:1781417/1‑140 (MQ=255)
tCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAgcg > 1:2097953/1‑140 (MQ=255)
tGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCa < 1:199481/140‑1 (MQ=255)
tGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCa < 2:683231/140‑1 (MQ=255)
tGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCa > 1:665221/1‑140 (MQ=255)
tGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCa < 2:1930521/140‑1 (MQ=255)
gTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAAt < 1:736516/140‑1 (MQ=255)
tATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCACAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATc < 1:378590/140‑1 (MQ=255)
gCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCt > 1:757567/1‑140 (MQ=255)
gCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCt > 2:146883/1‑140 (MQ=255)
ccGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTg < 2:1169507/140‑1 (MQ=255)
tCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCt > 1:1206792/1‑140 (MQ=255)
tCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCt > 2:547823/1‑140 (MQ=255)
tCCACGGTACAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCt > 2:1378951/1‑140 (MQ=255)
tCCACGGAGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCt > 1:1844007/1‑140 (MQ=255)
cAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTg > 2:915176/1‑140 (MQ=255)
aaCAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTgcg < 1:325985/140‑1 (MQ=255)
aCAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTgcgc < 2:1345160/140‑1 (MQ=255)
cgcACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTa > 1:457640/1‑140 (MQ=255)
cACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAAc < 1:1378951/140‑1 (MQ=255)
cACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAAc < 2:457640/140‑1 (MQ=255)
cAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCAc < 2:360445/140‑1 (MQ=255)
cAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCAc < 1:1998013/140‑1 (MQ=255)
aGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGATTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACg < 2:1365463/140‑1 (MQ=255)
aGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACg < 1:1017606/140‑1 (MQ=255)
cACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATa < 2:1577676/140‑1 (MQ=255)
cACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATa < 2:2067797/140‑1 (MQ=255)
aaCCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATa < 2:1071351/139‑1 (MQ=255)
aCCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATAc < 1:808788/140‑1 (MQ=255)
cGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACaa > 1:1392352/1‑140 (MQ=255)
cGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACaa > 1:1069157/1‑140 (MQ=255)
gTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAAcc < 1:395165/129‑1 (MQ=255)
gTTCGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAAcc > 2:395165/1‑129 (MQ=255)
cGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGt > 1:744120/1‑140 (MQ=255)
cGCAAGCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGt > 1:102034/1‑140 (MQ=255)
gCAATCCCCTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGtt > 1:19058/1‑140 (MQ=255)
ccccTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACccg > 2:74031/1‑140 (MQ=255)
ccccTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACccg > 1:326028/1‑140 (MQ=255)
cTGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACccgccg < 1:1812630/140‑1 (MQ=255)
tGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGa < 1:471146/140‑1 (MQ=255)
tGTTTACAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCACCGa < 1:1589578/140‑1 (MQ=255)
tGTTAACAGGCAAATTGAGTCAATAACGCCACGAAATTCAACACAGCCAGGGCGGGACCCCGCTGAGAGAAATGCATTAGCGCAAACCCCTGATCTTTTAAGCTGGGCTTTTACCCACGGTTAAAAAGGTTACCCGCCGa < 2:666536/140‑1 (MQ=255)
attttACAGGCAAATTGAGTCAATAACGCCACGCAATTCAACACACCCAGGGCGCGAACTCGCTAAGCGAAATGCATTAGCGCAAACCCCTGATTTTTTAAGCTGCGCTTTAAACCACGGATACAAATGTTCCCCGCCGa < 2:1115580/138‑1 (MQ=255)
ttttACAGGCAAATTGAGTCAATAACGCCACGCAATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATAGGCGAAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTCCCCGCCGAc < 2:1523371/139‑1 (MQ=255)
aCAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCt < 1:547823/140‑1 (MQ=255)
aCAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCt < 2:1410390/140‑1 (MQ=255)
aCAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCt < 2:1712085/140‑1 (MQ=255)
aCAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCt < 1:1497486/140‑1 (MQ=255)
cAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGACCTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCtt < 1:1734046/140‑1 (MQ=255)
cAGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCtt < 1:756799/140‑1 (MQ=255)
aaGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCtt < 2:665221/139‑1 (MQ=255)
aGGCAAATTGAGTCAATAACGCCACTCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCATGGATACAAATGTTACCCGCCGACGGCTTc > 2:1679517/1‑140 (MQ=255)
aGGCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTc > 2:756868/1‑140 (MQ=255)
ggCAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCg < 1:1672672/140‑1 (MQ=255)
cAAATTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGt < 1:1542919/140‑1 (MQ=255)
aaTTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGtat > 2:431492/1‑140 (MQ=255)
aaTTGAGTCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGt > 2:1568894/1‑138 (MQ=255)
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CATAAAATATCGCGCAATGGCAGGCATCCCCTTTCGCCCCGCAAATAAAGCATACAACGGTCTGGGTATGCCGCTCCACGGTGCAAACAGGCGCACCAGTTCACCGTTCGCAAGCCCCTGTTTACAGGCAAATTGAGGCAATAACGCCACGCCATTCAACACAACCAGGGCGCGAACTCGCTGAGCGAAATGCATTAGCGCAAATCCCTGATCTTTTAAGCTGCGCTTTTAACCACGGATACAAATGTTACCCGCCGACGGCTTCGGTAT > NC_000913/3059417‑3059686
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
