Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,096,891 |
G→T |
G71C (GGT→TGT) |
rdgB → |
dITP/XTP pyrophosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,096,891 | 0 | G | T | 100.0%
| 279.7
/ NA
| 81 | G71C (GGT→TGT) | rdgB | dITP/XTP pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (44/37); total (44/37) |
GTCTTGATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGG > NC_000913/3096754‑3097026
|
gTCTTGATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACtcttgt < 1:875866/140‑1 (MQ=255)
gTCTTGATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACtcttgt < 1:692329/140‑1 (MQ=255)
tttGATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACtcttgtct < 2:17381/139‑1 (MQ=255)
cTTGATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACtcttgtct < 1:1109449/140‑1 (MQ=255)
cTTGATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACtcttgtct < 2:481114/140‑1 (MQ=255)
cTTGATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACtcttgtct < 1:1664727/140‑1 (MQ=255)
attGATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACtcttgtct < 2:2258/139‑1 (MQ=255)
gATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGc < 2:410875/140‑1 (MQ=255)
gATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGc < 1:1923783/140‑1 (MQ=255)
gATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGc < 1:1822842/140‑1 (MQ=255)
cGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAg < 1:1413/140‑1 (MQ=255)
gTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGa > 2:2052418/1‑140 (MQ=255)
gTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGa > 2:1734393/1‑140 (MQ=255)
ggCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGAtt > 2:1195788/1‑139 (MQ=255)
ggCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGAtg > 2:1336162/1‑140 (MQ=255)
ggCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGAtg > 1:981481/1‑140 (MQ=255)
ggCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGAtg > 1:1044893/1‑140 (MQ=255)
cccAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGAtgtg > 1:1608791/1‑140 (MQ=255)
cccAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGAtgtg > 2:780166/1‑140 (MQ=255)
cccAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGAtgtg > 1:2039546/1‑140 (MQ=255)
ccAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGc > 2:1927878/1‑140 (MQ=255)
aaCAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTg > 2:1480918/1‑140 (MQ=255)
aCAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTgg > 2:514901/1‑140 (MQ=255)
aCCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTggcggc > 2:1491973/1‑140 (MQ=255)
aCCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTggcggc > 1:1390597/1‑140 (MQ=255)
tCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGgcgcg < 1:1685774/140‑1 (MQ=255)
cGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGgcgcgc < 1:34045/140‑1 (MQ=255)
cGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGgcgcgc < 1:863335/140‑1 (MQ=255)
ggCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGcc > 1:1911956/1‑140 (MQ=255)
ggCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGcc > 2:1156733/1‑140 (MQ=255)
ggCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGcc > 2:556297/1‑140 (MQ=255)
ggCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGcc > 2:815508/1‑140 (MQ=255)
gCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCg < 1:2096936/140‑1 (MQ=255)
gCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCg < 1:1601177/140‑1 (MQ=255)
gCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCg < 1:907696/140‑1 (MQ=255)
tGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCa > 2:1459572/1‑140 (MQ=255)
cGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGTCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACt < 2:36635/140‑1 (MQ=255)
gCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTc > 2:2070786/1‑140 (MQ=255)
gCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTc > 2:154309/1‑140 (MQ=255)
cTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTcc < 1:556297/140‑1 (MQ=255)
cTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTcc < 1:154309/140‑1 (MQ=255)
cTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTcc < 1:514901/140‑1 (MQ=255)
tGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCcg < 1:1342677/140‑1 (MQ=255)
aagaaACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCcgcg < 2:252843/140‑1 (MQ=255)
aagaaACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCcgcg < 1:1491973/140‑1 (MQ=255)
gaaACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCcgcgcg > 1:2028371/1‑140 (MQ=255)
gaaACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCcgcgcg < 2:172959/140‑1 (MQ=255)
aCCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTa > 2:2114543/1‑140 (MQ=255)
aCCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTa > 1:748399/1‑140 (MQ=255)
aCCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTa > 1:723519/1‑140 (MQ=255)
ccGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTAt < 1:846632/140‑1 (MQ=255)
ccTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCg > 1:304717/1‑140 (MQ=255)
ccTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCg > 1:1909663/1‑140 (MQ=255)
tATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGAcg > 2:2062713/1‑140 (MQ=255)
tATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGAcg > 2:827946/1‑140 (MQ=255)
cGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGa < 2:1428713/140‑1 (MQ=255)
cGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGa < 1:1927878/140‑1 (MQ=255)
aaCGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGa < 1:780166/140‑1 (MQ=255)
aaCGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGa > 1:875513/1‑140 (MQ=255)
aaCGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCACGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGa > 2:1555105/1‑140 (MQ=255)
aaaGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCt > 1:670592/1‑140 (MQ=255)
aaGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTg > 2:2034186/1‑140 (MQ=255)
gcgcgcCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCa > 2:1891730/1‑140 (MQ=255)
gcgcCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCTCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCaaa > 1:1361635/1‑140 (MQ=255)
gcgcCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCaaa < 2:981481/140‑1 (MQ=255)
cgcCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCaaaa > 2:1321974/1‑140 (MQ=255)
ggCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTgg < 1:815508/140‑1 (MQ=255)
ggCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTgg < 2:304717/140‑1 (MQ=255)
cAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGaa < 1:1029919/140‑1 (MQ=255)
cAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGaa < 1:2114543/140‑1 (MQ=255)
cAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCAATTACTCCGCCCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGaa < 1:1457883/140‑1 (MQ=255)
aCCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGaa > 1:1042876/1‑140 (MQ=255)
aCCGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGaa > 1:870637/1‑140 (MQ=255)
ccGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGaaa < 2:748399/140‑1 (MQ=255)
ccGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGaaa > 1:1973883/1‑140 (MQ=255)
cGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAg > 2:2093565/1‑140 (MQ=255)
cGCTTTACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAg < 2:670592/140‑1 (MQ=255)
tACCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTa > 2:1780522/1‑140 (MQ=255)
aCCGGCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTAc < 2:870637/140‑1 (MQ=255)
gCAATTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGga < 2:1973883/140‑1 (MQ=255)
aTTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCgg > 2:1323770/1‑136 (MQ=255)
aTTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCgg < 1:1323770/136‑1 (MQ=255)
aTTGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGgacga > 2:791005/1‑140 (MQ=255)
ttGCCGACGACTCTTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGgacgac < 2:1231306/140‑1 (MQ=255)
cgacTCTTGTCTGGCGGTAGGTGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTc > 2:1378872/1‑140 (MQ=255)
ctctTGTCTGGCGGTAGGTGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAgg < 1:1378872/140‑1 (MQ=255)
ctctTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAgg < 1:2062713/140‑1 (MQ=255)
ctctTGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAgg < 1:1321974/140‑1 (MQ=255)
|
GTCTTGATATCGTGGCCCAAACAGACCTCGGCGTTGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAGCGCGCCATGCGGCAAAAGTGACCGCTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGTGCTTGGCGGCGCGCCGGGCATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGCTGGAAACAATGAAAGACGTACCGGACGACCAACGTCAGG > NC_000913/3096754‑3097026
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
