Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,270,969 |
C→A |
G268C (GGT→TGT) |
garK ← |
glycerate 2‑kinase 1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,270,969 | 0 | C | A | 99.4%
| 582.5
/ ‑4.4
| 168 | G268C (GGT→TGT) | garK | glycerate 2‑kinase 1 |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (86/81); minor base G (0/1); total (86/82) |
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.05e-01 |
Only 100 of 169 total aligned reads displayed.
CTTCGCCACGTTTGCGACACCAATCGGTACCTTCCCGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACCACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGCATAGTGAGAGAGGTTATTGTC > NC_000913/3270832‑3271104
|
cttcGCCACGTTTGCGACACCAATCGGTACCTTCCCGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCTGTAGTGACGATTTCAATACAAc > 1:1072554/1‑140 (MQ=255)
cttcGCCACGTTTGCGACACCAATCGGTACCTTCCCGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAAc > 2:45912/1‑140 (MQ=255)
cGCCACGTTTGCGACACCAATCGGTACCTTCCCGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTTCAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACttt > 1:1612936/1‑140 (MQ=255)
cGCCACGTTTGCGACACCAATCGGTACCTTCCCGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACttt > 1:1009559/1‑140 (MQ=255)
ccACGTTTGCGACACCAATCGGTACCTTCCCGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTc > 1:645658/1‑140 (MQ=255)
ccACGTTTGCGACACCAATCGGTACCTTCCCGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTc > 1:1924839/1‑140 (MQ=255)
cGTTTGCGACACCAATCGGTACCTTCCCGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGt > 2:1081939/1‑140 (MQ=255)
cGACACCAATCGGTACCTTCCCGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCa < 2:924043/140‑1 (MQ=255)
cGACACCAATCGGTACCTTCCCGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCa < 1:425823/140‑1 (MQ=255)
aaTCGGTACCTTCCCGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGaa < 1:1556120/140‑1 (MQ=255)
tACCTTCCCGTGAATACTCTGGCTTTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACACCa > 1:1908059/1‑140 (MQ=255)
cccGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAgcg > 1:495478/1‑140 (MQ=255)
cccGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAgcg > 1:70957/1‑140 (MQ=255)
cccGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAgcg > 2:246032/1‑140 (MQ=255)
ccGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAgcgc < 1:119710/140‑1 (MQ=255)
ccGTGAA‑ACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAgcgcc < 1:787991/140‑1 (MQ=255)
cGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAgcgcc < 2:740346/140‑1 (MQ=255)
cGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAgcgcc < 1:202021/140‑1 (MQ=255)
gTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAgcgccg < 2:1391472/140‑1 (MQ=255)
gTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAgcgccg < 1:432531/140‑1 (MQ=255)
gAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAgcgccgcg < 1:272942/140‑1 (MQ=255)
gAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAgcgccgcg < 1:2147729/140‑1 (MQ=255)
aaTACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAgcgccgcgc > 1:1103026/1‑140 (MQ=255)
cTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATaccacc > 1:1827495/1‑140 (MQ=255)
gTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCg > 2:648404/1‑140 (MQ=255)
tCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGc < 2:826132/140‑1 (MQ=255)
tCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGc < 2:785680/140‑1 (MQ=255)
tCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGc < 2:2141563/140‑1 (MQ=255)
tCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGc < 2:1009559/140‑1 (MQ=255)
tCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGc < 1:1190279/140‑1 (MQ=255)
aaTACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAg > 2:1792101/1‑140 (MQ=255)
aaTACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAg > 1:1469471/1‑140 (MQ=255)
aCGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTc < 1:1430986/140‑1 (MQ=255)
cccTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTg > 1:1933898/1‑140 (MQ=255)
cTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCa > 2:111307/1‑140 (MQ=255)
cTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCa > 2:84971/1‑140 (MQ=255)
tCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCAcc > 2:1211354/1‑140 (MQ=255)
tCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCAcc > 2:987010/1‑140 (MQ=255)
tCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCAcc > 1:1093540/1‑140 (MQ=255)
cGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCgggg < 2:1772644/140‑1 (MQ=255)
ggTGATCGCCAGCGTACAATAGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCAACGGGGa < 2:1052055/140‑1 (MQ=255)
ggTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACG‑GTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGAc > 1:365622/1‑140 (MQ=255)
agTGATCACCAGCGTTCAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGa < 2:645658/139‑1 (MQ=255)
gTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGAc < 1:500113/140‑1 (MQ=255)
aTCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATc > 2:963789/1‑140 (MQ=255)
aTCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATc > 2:1576287/1‑140 (MQ=255)
tCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAACACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCt < 1:24736/140‑1 (MQ=255)
aCCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCttt < 1:111307/140‑1 (MQ=255)
aCCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCttt < 2:1966045/140‑1 (MQ=255)
cAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTca < 2:708000/140‑1 (MQ=255)
cAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTca > 1:1965415/1‑140 (MQ=255)
gCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTcaca < 2:1924839/140‑1 (MQ=255)
cGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACAt > 2:315020/1‑140 (MQ=255)
tACAATCGTGAATATGTTCCTCCAGATTCAGTGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCATGCACCGGGGACATCTTTCACATCa > 1:605846/1‑140 (MQ=255)
tACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCa > 1:880029/1‑140 (MQ=255)
tACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCa > 2:595822/1‑140 (MQ=255)
tACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCa > 1:1692332/1‑140 (MQ=255)
tACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCa > 2:1872542/1‑140 (MQ=255)
cAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAAc > 1:1255035/1‑140 (MQ=255)
cAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAAc > 2:1798050/1‑140 (MQ=255)
tCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATg > 2:1960740/1‑140 (MQ=255)
tGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAg > 2:870238/1‑140 (MQ=255)
tGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAg > 2:30260/1‑140 (MQ=255)
tGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAg > 2:1675917/1‑140 (MQ=255)
aaTATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAgcg > 1:1001996/1‑140 (MQ=255)
aaTATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAgcg > 1:881733/1‑140 (MQ=255)
aaTATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAgcg < 1:1637744/140‑1 (MQ=255)
aaTATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAgcg > 2:1501073/1‑140 (MQ=255)
atGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCtt < 2:1847442/140‑1 (MQ=255)
gTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCtttt > 1:572342/1‑140 (MQ=255)
gTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCtttt > 1:756956/1‑140 (MQ=255)
gTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCtttt > 2:812132/1‑140 (MQ=255)
gTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCtttt > 2:1442767/1‑140 (MQ=255)
gTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCtttt > 2:403680/1‑140 (MQ=255)
tcctccAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCtttttt > 1:2148737/1‑140 (MQ=255)
cctccAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTa < 2:1933898/140‑1 (MQ=255)
tccAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAAt < 1:1872542/140‑1 (MQ=255)
tccAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAAt < 1:691895/140‑1 (MQ=255)
tccAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAAt > 1:989842/1‑140 (MQ=255)
tccAGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAAt < 1:812132/140‑1 (MQ=255)
aGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGAc < 1:963789/140‑1 (MQ=255)
aGATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGAc < 1:1394477/140‑1 (MQ=255)
gATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGAcc < 1:1576287/140‑1 (MQ=255)
gATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGAcc < 2:487016/140‑1 (MQ=255)
gATTCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGAcc > 1:924876/1‑140 (MQ=255)
tCAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCg > 1:153857/1‑140 (MQ=255)
cAGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCgg < 1:1798050/140‑1 (MQ=255)
aGCGCCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGc > 2:529935/1‑140 (MQ=255)
cgcCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGCAt < 1:960217/140‑1 (MQ=255)
cgcCGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGCAt > 2:1265646/1‑140 (MQ=255)
ccGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGCATAg < 1:1960740/140‑1 (MQ=255)
cGTAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGCATAGt < 1:403680/140‑1 (MQ=255)
tAGTGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGCAt < 1:995508/135‑1 (MQ=255)
tGACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGCATAGTgagag < 2:2148737/140‑1 (MQ=255)
gACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGCATAGTgagaga < 2:1612936/140‑1 (MQ=255)
gACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGCATAGTgagaga < 1:45912/140‑1 (MQ=255)
gACGATTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGCATAGTgagaga < 2:934732/140‑1 (MQ=255)
aTTTCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGCATAGTGAGAGAGGtt > 1:2089263/1‑140 (MQ=255)
ttCAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGCATAGTGAGAGAGGTTAt > 1:1642583/1‑140 (MQ=255)
cAATACAACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGCATAGTGAGAGAGGTTATTg < 2:2069769/140‑1 (MQ=255)
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CTTCGCCACGTTTGCGACACCAATCGGTACCTTCCCGTGAATACTCTGGCTGTCAATACGCCCTTCACCGGTGATCACCAGCGTACAATCGTGAATATGTTCCTCCAGATTCAGCGCCGTAGTGACGATTTCAATACCACTTTTCAGTTCCGCACCAAGAAACGCCATTAGCGCCGCGCCCATACCACCCGCAGCTCCTGCACCGGGGACATCTTTCACATCAACATGCAGCGCTTTTTTAATGACCTCGGCATAGTGAGAGAGGTTATTGTC > NC_000913/3270832‑3271104
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
