Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A11 F48 I1 R1	62	93.4	3176452	99.2%	3151040	139.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,279,496	G→T	D195Y (GAT→TAT)	kbaZ →	tagatose‑1,6‑bisphosphate aldolase 1 subunit KbaZ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,279,496	0	G	T	100.0%	230.8 / NA	67	D195Y (GAT→TAT)	kbaZ	tagatose‑1,6‑bisphosphate aldolase 1 subunit KbaZ
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (35/32); total (35/32)

CCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGGATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGATCACACCAACGTTATTGATTAT  >  NC_000913/3279360‑3279630

ccGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATg                                                                                                                                     <  1:813598/140‑1 (MQ=255)

       gCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGccgcccg                                                                                                                              <  2:1384201/140‑1 (MQ=255)

        cGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGccgcccgc                                                                                                                             <  1:1263983/140‑1 (MQ=255)

        cGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGccgcccgc                                                                                                                             <  1:737905/140‑1 (MQ=255)

          aaaGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGAGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCgcgc                                                                                                                           <  2:1564575/140‑1 (MQ=255)

                   gaagaaACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGa                                                                                                                  <  2:605378/140‑1 (MQ=255)

                      gaaACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGc                                                                                                               >  2:42108/1‑140 (MQ=255)

                        aaCCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGccc                                                                                                             <  2:491751/140‑1 (MQ=255)

                        aaCCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGccc                                                                                                             <  1:390561/140‑1 (MQ=255)

                           cTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATc                                                                                                          >  2:1286189/1‑140 (MQ=255)

                           cTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATc                                                                                                          >  2:1001893/1‑140 (MQ=255)

                                ttGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCAc                                                                                                     >  1:1179198/1‑140 (MQ=255)

                                  gAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGc                                                                                                   >  1:1439460/1‑140 (MQ=255)

                                  gAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGCACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGc                                                                                                   >  2:1386420/1‑140 (MQ=255)

                                   aaCACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGcc                                                                                                  >  1:647913/1‑140 (MQ=255)

                                     cacTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCtt                                                                                                >  2:797114/1‑140 (MQ=255)

                                          tGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGaaa                                                                                           >  1:891852/1‑140 (MQ=255)

                                          tGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGaaa                                                                                           >  2:93357/1‑140 (MQ=255)

                                                aGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAATCCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAg                                                                                     <  1:802399/140‑1 (MQ=255)

                                                  ccGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGt                                                                                   >  1:1199110/1‑140 (MQ=255)

                                                        tGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAAt                                                                             <  2:647913/140‑1 (MQ=255)

                                                            gTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCa                                                                         >  2:403109/1‑140 (MQ=255)

                                                             tATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGACCTGGCGGTCGCCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCAt                                                                        <  2:1328659/140‑1 (MQ=255)

                                                               tGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCt                                                                      >  1:792722/1‑140 (MQ=255)

                                                                gTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTg                                                                     >  2:104608/1‑140 (MQ=255)

                                                                  cATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGc                                                                   <  2:324943/140‑1 (MQ=255)

                                                                    ttGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCacct                                                                      <  2:1068787/135‑4 (MQ=255)

                                                                    ttGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCa                                                                 >  2:952121/1‑140 (MQ=255)

                                                                    ttGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCACCt                                                                      >  1:1068787/1‑135 (MQ=255)

                                                                    ttGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGAATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCa                                                                 >  2:635029/1‑140 (MQ=255)

                                                                      ggTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACg                                                               <  2:551246/140‑1 (MQ=255)

                                                                      ggTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACg                                                               <  2:1237907/140‑1 (MQ=255)

                                                                       gTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGc                                                              >  1:562363/1‑140 (MQ=255)

                                                                       gTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGc                                                              >  2:863461/1‑140 (MQ=255)

                                                                         aCCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGcat                                                            >  1:1046163/1‑140 (MQ=255)

                                                                         aCCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGcat                                                            >  1:289220/1‑140 (MQ=255)

                                                                           cGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGTCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGcatca                                                          >  2:704040/1‑140 (MQ=255)

                                                                           cGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGcatca                                                          <  1:1001893/140‑1 (MQ=255)

                                                                           cGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGcatca                                                          >  2:796887/1‑140 (MQ=255)

                                                                           cGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGcatca                                                          >  2:1578059/1‑140 (MQ=255)

                                                                            gAAGTGCCGGTACCTGGCGGGGGGCATGAAACCTTAAGCGAGCTGGCGGTCACCCCGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGcatcat                                                         <  2:553963/140‑1 (MQ=255)

                                                                            gAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGAAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGcatcat                                                         <  1:1286189/140‑1 (MQ=255)

                                                                              aGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTg                                                       <  2:1179198/140‑1 (MQ=255)

                                                                                 gCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGccc                                                    >  1:729788/1‑140 (MQ=255)

                                                                                  ccGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCt                                                   >  2:801974/1‑140 (MQ=255)

                                                                                  ccGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCt                                                   >  1:1138162/1‑140 (MQ=255)

                                                                                  ccGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCt                                                   >  2:98505/1‑140 (MQ=255)

                                                                                         cTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGtt                                            <  1:42108/140‑1 (MQ=255)

                                                                                            gcggcgCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCaa                                         >  1:163958/1‑140 (MQ=255)

                                                                                                cgcgcATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCg                                     >  2:1243877/1‑140 (MQ=255)

                                                                                                cgcgcATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCg                                     >  1:384410/1‑140 (MQ=255)

                                                                                                  cgcATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGc                                   >  1:479689/1‑140 (MQ=255)

                                                                                                   gcATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCg                                  >  2:1299351/1‑140 (MQ=255)

                                                                                                    cATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGt                                 <  2:1046163/140‑1 (MQ=255)

                                                                                                         aaCCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAAt                            <  2:1439460/140‑1 (MQ=255)

                                                                                                         aaCCTTAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAAt                            <  2:971903/140‑1 (MQ=255)

                                                                                                             ttAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGa                        <  1:635029/140‑1 (MQ=255)

                                                                                                              tAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGAt                       <  2:384410/140‑1 (MQ=255)

                                                                                                              tAAGCGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGAt                       <  2:1138162/140‑1 (MQ=255)

                                                                                                                  cGAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAGAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGATcaca                   >  1:647106/1‑140 (MQ=255)

                                                                                                                   gAGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGATCacac                  <  1:1299351/140‑1 (MQ=255)

                                                                                                                    aGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGATCACAcc                 <  2:562363/140‑1 (MQ=255)

                                                                                                                    aGCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGATCACAcc                 <  2:792722/140‑1 (MQ=255)

                                                                                                                     gCTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGATCACACCa                <  1:796887/140‑1 (MQ=255)

                                                                                                                      cTGGCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGATCACACCaa               >  2:1523393/1‑140 (MQ=255)

                                                                                                                         gCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGATCACACCAACGt            >  2:741789/1‑140 (MQ=255)

                                                                                                                         gCGGTCACCACGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGATCACACCAACGt            <  2:479689/140‑1 (MQ=255)

                                                                                                                               accacGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGCGGTTCAACCCGGCGTCGAATTCGATCACACCAACGTTATTGa      >  1:834437/1‑140 (MQ=255)

                                                                                                                                   cGCCGTATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAGAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGATCACACCAACGTTATTGATTAt  <  2:647106/140‑1 (MQ=255)

CCGTCTGGCGAAAGTGGCGGAAGAAACCTGTCTTGAACACTTTGGCGAAGCCGATCTGGAGTATGTCATTGGTACCGAAGTGCCGGTACCTGGCGGCGCGCATGAAACCTTAAGCGAGCTGGCGGTCACCACGCCGGATGCCGCCCGCGCCACGCTGGAAGCCCATCGTCACGCCTTTGAAAAGCAAGGTTTGAATGCCATCTGGCCACGCATCATTGCCCTGGTGGTTCAACCCGGCGTCGAATTCGATCACACCAACGTTATTGATTAT  >  NC_000913/3279360‑3279630

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A