Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F48 I1 R1	508	125.6	4303852	99.2%	4269421	139.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,497,937	G→T	R37L (CGC→CTC)	cysG →	siroheme synthase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,497,937	0	G	T	100.0%	388.1 / NA	112	R37L (CGC→CTC)	cysG	siroheme synthase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (50/62); total (50/62)

Only 100 of 115 total aligned reads displayed.

CGGTTAATTACTAAGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCGCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTGCTGGCTGGCGATTGCAGCGACGGAT  >  NC_000913/3497803‑3498070

cGGTTAATTACTAAGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTaa                                                                                                                                  <  2:1793860/140‑1 (MQ=255)

cGGTTAATTACTAAGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTaa                                                                                                                                  <  1:1689918/140‑1 (MQ=255)

  gTTAATTACTAAGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACg                                                                                                                                <  2:252222/140‑1 (MQ=255)

  gTTAATTACTAAGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACg                                                                                                                                <  1:602767/140‑1 (MQ=255)

    tAATTACTAAGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGt                                                                                                                              <  2:578362/140‑1 (MQ=255)

    tAATTACTAAGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGt                                                                                                                              <  1:702339/140‑1 (MQ=255)

      aTTACTAAGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGa                                                                                                                            <  2:471031/140‑1 (MQ=255)

       ttACTAAGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGaa                                                                                                                           <  1:1138567/140‑1 (MQ=255)

       ttACTAAGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGaa                                                                                                                           <  2:59135/140‑1 (MQ=255)

           tAAGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCa                                                                                                                       <  1:868171/140‑1 (MQ=255)

            aaGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCAt                                                                                                                      <  2:1258154/140‑1 (MQ=255)

             aGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCAtt                                                                                                                     >  1:1453043/1‑140 (MQ=255)

             aGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCAtt                                                                                                                     >  1:493478/1‑140 (MQ=255)

             aGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCAtt                                                                                                                     >  1:466347/1‑140 (MQ=255)

             aGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCAtt                                                                                                                     >  2:1148711/1‑140 (MQ=255)

             aGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGCGATGTCGCGGGAAGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGGATGCAtt                                                                                                                     >  2:1487666/1‑140 (MQ=255)

               gggTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAg                                                                                                                   >  1:312569/1‑140 (MQ=255)

                ggTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGc                                                                                                                  <  2:271548/140‑1 (MQ=255)

                ggTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGc                                                                                                                  <  1:297673/140‑1 (MQ=255)

                ggTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGc                                                                                                                  <  1:2026912/140‑1 (MQ=255)

                  tttttACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGt                                                                                                                <  1:2001999/140‑1 (MQ=255)

                  tttttACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGATCTCTTAACGGTGAATGCATTAGCGt                                                                                                                >  1:2065936/1‑140 (MQ=255)

                    tttACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGttt                                                                                                              >  1:1496189/1‑140 (MQ=255)

                    tttACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGttt                                                                                                              >  2:1668430/1‑140 (MQ=255)

                     ttACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTa                                                                                                             <  1:1191906/140‑1 (MQ=255)

                       aCGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTAtt                                                                                                           <  2:355947/140‑1 (MQ=255)

                         gTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTcc                                                                                                         >  1:1161862/1‑140 (MQ=255)

                          tGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCca                                                                                                        <  2:1331675/140‑1 (MQ=255)

                          tGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCca                                                                                                        <  2:1259371/140‑1 (MQ=255)

                          tGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCca                                                                                                        >  1:708321/1‑140 (MQ=255)

                          tGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCca                                                                                                        <  1:2116523/140‑1 (MQ=255)

                          tGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCca                                                                                                        <  2:2026804/140‑1 (MQ=255)

                           ggATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCcac                                                                                                       >  1:1031961/1‑140 (MQ=255)

                            gATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCcaca                                                                                                      >  2:1293956/1‑140 (MQ=255)

                                 tttGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCa                                                                                                 >  1:1847247/1‑140 (MQ=255)

                                      cTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCa                                                                                            <  2:2065936/140‑1 (MQ=255)

                                      cTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCa                                                                                            <  1:1722062/140‑1 (MQ=255)

                                       tataTTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCAt                                                                                           >  2:758052/1‑140 (MQ=255)

                                       tataTTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACACAGGCGCTCTCTTAACGG‑GAATGCATTAGCGTTTATTCCACAGTTCACCGCATg                                                                                          >  2:463378/1‑140 (MQ=255)

                                        atatTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATg                                                                                          <  2:153082/140‑1 (MQ=255)

                                         tatTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATgg                                                                                         >  1:1296797/1‑140 (MQ=255)

                                         tatTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATgg                                                                                         >  2:1988962/1‑140 (MQ=255)

                                         tatTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATgg                                                                                         >  2:2108376/1‑140 (MQ=255)

                                          atTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATggg                                                                                        <  2:453162/140‑1 (MQ=255)

                                          atTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATggg                                                                                        >  2:642713/1‑140 (MQ=255)

                                          atTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATggg                                                                                        <  2:1688918/140‑1 (MQ=255)

                                          atTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATggg                                                                                        <  2:1161862/140‑1 (MQ=255)

                                          atTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATggg                                                                                        <  1:2108376/140‑1 (MQ=255)

                                           ttttGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGc                                                                                       <  2:766571/140‑1 (MQ=255)

                                           ttttGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGc                                                                                       <  2:1031961/140‑1 (MQ=255)

                                            tttGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCa                                                                                      >  1:156070/1‑140 (MQ=255)

                                              tGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGa                                                                                    >  2:1641653/1‑140 (MQ=255)

                                              tGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGa                                                                                    >  2:2071305/1‑140 (MQ=255)

                                                ccAATTACGCGATCGCGACTGTCTGATTGTCGGTGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATg                                                                                  <  1:1747089/140‑1 (MQ=255)

                                                ccAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATg                                                                                  >  2:1777135/1‑140 (MQ=255)

                                                  aaTTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCa                                                                                <  2:493478/140‑1 (MQ=255)

                                                   aTTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAg                                                                               <  2:1453043/140‑1 (MQ=255)

                                                   aTTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAg                                                                               <  2:1594948/140‑1 (MQ=255)

                                                   aTTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAg                                                                               <  2:708321/140‑1 (MQ=255)

                                                   aTTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAg                                                                               <  1:932085/140‑1 (MQ=255)

                                                    ttACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAgg                                                                              <  1:1851550/140‑1 (MQ=255)

                                                    ttACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAgg                                                                              <  1:1988962/140‑1 (MQ=255)

                                                    ttACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAgg                                                                              <  1:1148711/140‑1 (MQ=255)

                                                     tACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGc                                                                             <  1:1777135/140‑1 (MQ=255)

                                                             cgcgACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAAc                                                                     >  1:1666932/1‑140 (MQ=255)

                                                             cgcgACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAAc                                                                     >  1:385276/1‑140 (MQ=255)

                                                                gACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAGCGGTGAATGCATTAGCGTTTATTCCACAGTTCGTGGCGTGGGCAGATGCAGGCATGTTAACCCt                                                                  <  2:1567670/140‑1 (MQ=255)

                                                                 aCTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCtc                                                                 >  1:1614905/1‑140 (MQ=255)

                                                                     tCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCtcgtcg                                                             >  1:1459716/1‑140 (MQ=255)

                                                                      cTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGa                                                            >  2:296511/1‑140 (MQ=255)

                                                                      cTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGa                                                            >  2:594422/1‑140 (MQ=255)

                                                                      cTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGGTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTTACCGCATGGGCAGATGCAGGCATTTTAACCCTCGTCGa                                                            >  1:525315/1‑140 (MQ=255)

                                                                       tGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGaa                                                           <  1:758052/140‑1 (MQ=255)

                                                                       tGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGaa                                                           >  2:701085/1‑140 (MQ=255)

                                                                        gATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAg                                                          <  2:1729982/140‑1 (MQ=255)

                                                                          ttGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAggg                                                        >  2:1662797/1‑140 (MQ=255)

                                                                          ttGTCGGCGGTGGGGATGTCGCGGAACGCAAAGCAAGGTTGCTTTTAGAGGCAGGCGCTCTCTTAACGGTGAATGCATTTGCGTTTATTCCACAGTTCACCGCATCGGCAGATGCAGGCATGTTAACCTTCGTCGAAggg                                                        >  2:1841083/1‑140 (MQ=255)

                                                                                      gtgATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGCTTTTTCCCCAGTTCACCCCATGGGCAGATGCAGGCATGTTAAGCCCCGTCGAAGGGCCATTtgattta                                            >  2:533867/1‑137 (MQ=255)

                                                                                          tGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGTCGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGcc                                        <  1:13383/140‑1 (MQ=255)

                                                                                          tGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGcc                                        <  2:525315/140‑1 (MQ=255)

                                                                                          tGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGcc                                        <  2:279940/140‑1 (MQ=255)

                                                                                             cgcgGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTtc                                     >  1:900766/1‑140 (MQ=255)

                                                                                              gcgGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTtct                                    >  2:1608967/1‑140 (MQ=255)

                                                                                              gcgGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTtct                                    >  1:1322663/1‑140 (MQ=255)

                                                                                               cgGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTtctc                                   >  1:496892/1‑140 (MQ=255)

                                                                                                 gAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGTGCCATTTGATGAAAGCCTTCTCGa                                 >  2:787758/1‑140 (MQ=255)

                                                                                                  aaCGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGac                                <  1:1293956/140‑1 (MQ=255)

                                                                                                           cAAGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATACAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTgctgg                       <  2:1847247/140‑1 (MQ=255)

                                                                                                             aGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTgctggct                     <  1:1171754/140‑1 (MQ=255)

                                                                                                             aGGTTGCTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTgctggct                     <  2:1637991/140‑1 (MQ=255)

                                                                                                                   cTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTGCTGGCTGGCGAt               >  1:1173017/1‑140 (MQ=255)

                                                                                                                   cTGTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTGCTGGCTGGCGAt               >  2:1853710/1‑140 (MQ=255)

                                                                                                                     gTTAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGATAACCCTCGTCGAAGGACCATTTGATGAAAGCCTTCTCGACACCTGCTGGCTGGCGATTg             <  2:1699557/140‑1 (MQ=255)

                                                                                                                      ttAGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTGCTGGCTGGCGATTGc            >  1:500584/1‑140 (MQ=255)

                                                                                                                        aGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTGCTGGCTGGCGATTGCAg          <  1:701085/140‑1 (MQ=255)

                                                                                                                        aGACGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTGCTGGCTGGCGATTGCAg          >  1:250151/1‑140 (MQ=255)

                                                                                                                          aCGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTGCTGGCTGGCGATTGCAGCg        <  1:1608967/140‑1 (MQ=255)

                                                                                                                          aCGCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTGCTGGCTGGCGATTGCAGCg        >  2:1846719/1‑140 (MQ=255)

                                                                                                                            gCAGGCGCTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTGCTGGCTGGCGATTGCAGCGAc      <  2:1961753/140‑1 (MQ=255)

                                                                                                                                gcgcTCTCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTGCTGGCTGGCGATTGCAGCGACGgat  >  2:1290221/1‑140 (MQ=255)

CGGTTAATTACTAAGGGGTTTTTACGTGGATCATTTGCCTATATTTTGCCAATTACGCGATCGCGACTGTCTGATTGTCGGCGGTGGTGATGTCGCGGAACGCAAAGCAAGGTTGCTGTTAGACGCAGGCGCTCGCTTAACGGTGAATGCATTAGCGTTTATTCCACAGTTCACCGCATGGGCAGATGCAGGCATGTTAACCCTCGTCGAAGGGCCATTTGATGAAAGCCTTCTCGACACCTGCTGGCTGGCGATTGCAGCGACGGAT  >  NC_000913/3497803‑3498070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A