Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F48 I1 R1	508	125.6	4303852	99.2%	4269421	139.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,503,770	G→T	D202Y (GAT→TAT)	frlD →	fructoselysine 6‑kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,503,770	0	G	T	100.0%	289.0 / NA	87	D202Y (GAT→TAT)	frlD	fructoselysine 6‑kinase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (45/42); total (45/42)

TGGTGCCGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGGATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGC  >  NC_000913/3503633‑3503902

tGGTGCCGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTTTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTAt                                                                                                                                    >  2:379966/1‑140 (MQ=255)

tGGTGCCGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTAt                                                                                                                                    >  2:1061022/1‑140 (MQ=255)

tGGTGCCGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTAt                                                                                                                                    >  2:1771277/1‑140 (MQ=255)

  gTGCCGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATgg                                                                                                                                  >  1:784345/1‑140 (MQ=255)

  gTGCCGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATgg                                                                                                                                  >  2:191811/1‑140 (MQ=255)

  gTGCCGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATgg                                                                                                                                  >  1:1559038/1‑140 (MQ=255)

  gTGCCGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATg                                                                                                                                   <  1:1837434/139‑1 (MQ=255)

  gTGCCGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATg                                                                                                                                   >  2:1837434/1‑139 (MQ=255)

      cGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGgcgcg                                                                                                                              <  1:1385400/140‑1 (MQ=255)

      cGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGgcgcg                                                                                                                              <  2:1465133/140‑1 (MQ=255)

      cGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGgcgcg                                                                                                                              <  2:1949165/140‑1 (MQ=255)

        cATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCa                                                                                                                            >  2:63521/1‑140 (MQ=255)

        cATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCa                                                                                                                            >  1:1181516/1‑140 (MQ=255)

        cATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCa                                                                                                                            >  1:177180/1‑140 (MQ=255)

        cATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCa                                                                                                                            >  1:1100509/1‑140 (MQ=255)

          tctcGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGgcgcg                                                                                                                              >  1:615403/1‑136 (MQ=255)

          tctcGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGgcgcg                                                                                                                              <  2:615403/136‑1 (MQ=255)

          tctcGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGt                                                                                                                          >  2:1839620/1‑140 (MQ=255)

                    gcctttgcctCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCa                                                                                                                <  2:177180/140‑1 (MQ=255)

                    gcctttgcctCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCa                                                                                                                <  1:191811/140‑1 (MQ=255)

                    gcctttgcctCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCa                                                                                                                >  2:1833131/1‑140 (MQ=255)

                         tgcctCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTc                                                                                                           <  1:1839620/140‑1 (MQ=255)

                          gcctCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGt                                                                                                                  >  2:436791/1‑132 (MQ=255)

                          gcctCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGt                                                                                                                  <  1:436791/132‑1 (MQ=255)

                              ccgcaccgcaAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGaa                                                                                                      <  1:1452558/140‑1 (MQ=255)

                               cgcaccgcaAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAAc                                                                                                     >  2:1277980/1‑140 (MQ=255)

                                   ccgcaAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGt                                                                                                 <  2:1812131/140‑1 (MQ=255)

                                   acgcaAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGt                                                                                                 <  2:16708/139‑1 (MQ=255)

                                    cgcaAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTg                                                                                                >  2:1632292/1‑140 (MQ=255)

                                    cgcaAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTg                                                                                                >  1:1625919/1‑140 (MQ=255)

                                     gcaAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCATGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGa                                                                                               <  1:440894/140‑1 (MQ=255)

                                      caAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGAc                                                                                              >  2:900914/1‑140 (MQ=255)

                                      caAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGAc                                                                                              >  2:1069817/1‑140 (MQ=255)

                                       aagaagACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACg                                                                                             <  1:1537270/140‑1 (MQ=255)

                                        agaagaCGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACgg                                                                                            <  1:841417/140‑1 (MQ=255)

                                             aCGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATc                                                                                       <  1:1869384/140‑1 (MQ=255)

                                             aCGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATc                                                                                       <  2:1559038/140‑1 (MQ=255)

                                              cGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTCTGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCg                                                                                      >  1:1787113/1‑140 (MQ=255)

                                              cGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCg                                                                                      >  1:16144/1‑140 (MQ=255)

                                                    gCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCa                                                                                >  1:1411670/1‑140 (MQ=255)

                                                        cGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATggg                                                                            <  2:1346154/140‑1 (MQ=255)

                                                             gAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCg                                                                       <  1:1069817/140‑1 (MQ=255)

                                                                  tGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGAt                                                                  >  2:1181187/1‑140 (MQ=255)

                                                                  tGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGAt                                                                  >  1:1003146/1‑140 (MQ=255)

                                                                     aaGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCg                                                               >  2:997213/1‑140 (MQ=255)

                                                                     aaGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCg                                                               >  1:524283/1‑140 (MQ=255)

                                                                           ttgttgCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGtt                                                             >  1:680430/1‑136 (MQ=255)

                                                                           ttgttgCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGtt                                                             <  2:680430/136‑1 (MQ=255)

                                                                              ttgCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGcc                                                      >  1:1816636/1‑140 (MQ=255)

                                                                              ttgCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGcc                                                      >  1:181446/1‑140 (MQ=255)

                                                                                  ccGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGAt                                                  <  2:1045916/140‑1 (MQ=255)

                                                                                   cGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGAtt                                                 >  2:1420354/1‑140 (MQ=255)

                                                                                     tGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTcc                                               >  1:566291/1‑140 (MQ=255)

                                                                                     tGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTcc                                               >  1:1888014/1‑140 (MQ=255)

                                                                                     tGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTcc                                               >  1:2072373/1‑140 (MQ=255)

                                                                                      ggCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCt                                              >  2:1357459/1‑140 (MQ=255)

                                                                                       gcgcAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCGGGAGATTCGTTCATTGCCGGATTCCtt                                             <  2:524283/140‑1 (MQ=255)

                                                                                       gcgcAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCtt                                             <  2:1115670/140‑1 (MQ=255)

                                                                                           aGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGcc                                                      <  1:235765/127‑1 (MQ=255)

                                                                                           aGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGcc                                                      >  2:235765/1‑127 (MQ=255)

                                                                                            ggAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCgg                                        <  2:2072373/140‑1 (MQ=255)

                                                                                               aCAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTg                                     <  1:1726825/140‑1 (MQ=255)

                                                                                                 aGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGt                                   <  2:1262808/140‑1 (MQ=255)

                                                                                                   tGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCt                                 <  2:784345/140‑1 (MQ=255)

                                                                                                    gATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTg                                <  1:2038433/140‑1 (MQ=255)

                                                                                                     aTTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGc                               <  1:1771277/140‑1 (MQ=255)

                                                                                                     aTTGTCACGCTGGGTG‑AAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCg                              >  2:236181/1‑140 (MQ=255)

                                                                                                       tGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCgg                             >  1:2143848/1‑140 (MQ=255)

                                                                                                       tGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCgg                             >  1:405426/1‑140 (MQ=255)

                                                                                                        gTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCggg                            >  1:612973/1‑140 (MQ=255)

                                                                                                        gTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCggg                            >  1:1910243/1‑140 (MQ=255)

                                                                                                        gTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCggg                            >  2:1632529/1‑140 (MQ=255)

                                                                                                        gTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCg                              >  1:1774308/1‑138 (MQ=255)

                                                                                                        gTCACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCg                              <  2:1774308/138‑1 (MQ=255)

                                                                                                          cACGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGa                          <  2:1181516/140‑1 (MQ=255)

                                                                                                           aCGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGAt                         <  2:1910243/140‑1 (MQ=255)

                                                                                                           aCGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGAt                         <  1:532812/140‑1 (MQ=255)

                                                                                                           aCGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGAt                         >  2:807653/1‑140 (MQ=255)

                                                                                                           aCGCTGGGTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGAt                         <  1:1061022/140‑1 (MQ=255)

                                                                                                                gggTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACAt                    <  2:1787113/140‑1 (MQ=255)

                                                                                                                 ggTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACAtt                   >  2:450705/1‑140 (MQ=255)

                                                                                                                 ggTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACAtt                   >  1:2052798/1‑140 (MQ=255)

                                                                                                                 ggTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACAtt                   >  1:1860813/1‑140 (MQ=255)

                                                                                                                  gTGAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTa                  <  1:1632551/140‑1 (MQ=255)

                                                                                                                    gAAAACGGCAGCATTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTAcc                <  1:379966/140‑1 (MQ=255)

                                                                                                                           gcagcaTTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCg         <  2:1625919/140‑1 (MQ=255)

                                                                                                                            cagcaTTGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGa        <  1:1001055/140‑1 (MQ=255)

                                                                                                                                  tGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACGCCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAgcgc  <  2:880587/140‑1 (MQ=255)

                                                                                                                                  tGCCTGGTATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAgcgc  <  1:1181187/140‑1 (MQ=255)

TGGTGCCGCATCTCGATTTTGCCTTTGCCTCCGCACCGCAAGAAGACGAAACGCTGCGTCTGAAGATGAAAGCGATTGTTGCCCGTGGCGCAGGAACAGTGATTGTCACGCTGGGTGAAAACGGCAGCATTGCCTGGGATGGCGCGCAGTTCTGGCGTCAGGCTCCTGAACCGGTGACGGTTATCGACACCATGGGTGCCGGAGATTCGTTCATTGCCGGATTCCTTTGCGGCTGGTCTGCGGGGATGACATTACCGCAGGCGATAGCGC  >  NC_000913/3503633‑3503902

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A