Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F48 I1 R1
|
79 |
90.7 |
3162666 |
99.0% |
3131039 |
139.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,509,349 |
G→T |
T155T (ACC→ACA) |
yhfW ← |
putative mutase YhfW |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,509,349 | 0 | G | T | 97.2%
| 244.1
/ 0.3
| 71 | T155T (ACC→ACA) | yhfW | putative mutase YhfW |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base T (37/32); total (38/33) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.61e-01 |
TTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCTGCTCAACA > NC_000913/3509213‑3509484
|
tttCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTa < 1:861281/140‑1 (MQ=255)
tttCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTa < 2:1569009/140‑1 (MQ=255)
tttCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTa < 2:771176/140‑1 (MQ=255)
tttCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTa < 1:202824/140‑1 (MQ=255)
ttCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTaa < 1:1544019/140‑1 (MQ=255)
tCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTa < 2:1289547/138‑1 (MQ=255)
tCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTa > 1:1289547/1‑138 (MQ=255)
cGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTta < 1:1009117/140‑1 (MQ=255)
tGACTGTCGGTTAACAGGCCACCAAAAGTAATGACCCGACCGACCTGTACCTGCTCACGCCCGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATc < 1:245100/140‑1 (MQ=255)
aCTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCg > 2:630866/1‑140 (MQ=255)
cGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCg < 1:808094/140‑1 (MQ=255)
cGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCg < 2:787895/140‑1 (MQ=255)
ggCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCg > 2:1030895/1‑140 (MQ=255)
ggCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCg > 1:696346/1‑140 (MQ=255)
gCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGc > 1:913182/1‑140 (MQ=255)
ccaccaAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGcc > 1:541254/1‑140 (MQ=255)
gTAATGACCCGACCGACCTGTACCTGCTCACGCACAATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAAc < 1:927938/140‑1 (MQ=255)
tGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAACCGCAACCGcc > 2:60632/1‑140 (MQ=255)
aCCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTg > 1:709706/1‑140 (MQ=255)
ccgaccgaCCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGAt > 1:1121313/1‑140 (MQ=255)
accgaccTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGa > 1:1168790/1‑140 (MQ=255)
accgaccTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGAAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGa > 1:124975/1‑140 (MQ=255)
gTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGa < 1:1533902/140‑1 (MQ=255)
atACCTGCTCACGCACGATACGGCAAATTTTGATTGGTTCGTAAAAAGAGAGCACGAAGAGATTGGATGTAATGTTTAAGACCTGGATTAAAACCGCCGCAAGATTATCGCCTAACGCACCCGCCTGATTGACCCACAGa < 2:250962/139‑1 (MQ=255)
gCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGc > 2:290219/1‑140 (MQ=255)
cTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCa > 1:695385/1‑140 (MQ=255)
cTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCa > 2:653085/1‑140 (MQ=255)
cTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCa > 1:1553517/1‑140 (MQ=255)
cTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCAAAGAAATTGCa > 1:909628/1‑140 (MQ=255)
tCACGTACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAg > 2:740559/1‑140 (MQ=255)
aaacgcacgATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAAGGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAg < 2:412781/138‑1 (MQ=255)
acgcacgATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGat < 1:55809/140‑1 (MQ=255)
cgcacgATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGatc > 2:417508/1‑140 (MQ=255)
cgcacgATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGatc > 2:989262/1‑140 (MQ=255)
cgcacgATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGatc > 2:666722/1‑140 (MQ=255)
cgcacgATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGatc > 1:625435/1‑140 (MQ=255)
cgcacgATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGAGTGACCCACAGAAATTGCAGatc > 1:1321544/1‑140 (MQ=255)
cacgATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGatcat < 1:1537926/140‑1 (MQ=255)
cacgATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGatcat < 2:1168790/140‑1 (MQ=255)
tACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCa < 1:653085/140‑1 (MQ=255)
aCCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGgc > 2:915484/1‑140 (MQ=255)
acAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGgcg < 2:913182/139‑1 (MQ=255)
aTTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTc > 1:258853/1‑140 (MQ=255)
aTTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTc > 2:138103/1‑140 (MQ=255)
ttttGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTcc < 1:630866/140‑1 (MQ=255)
ttttGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTAAAGACCTGGCAAAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTcc < 2:709706/140‑1 (MQ=255)
tttGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCa > 2:745564/1‑140 (MQ=255)
aTTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTg > 2:817431/1‑140 (MQ=255)
aTTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTg > 2:1484464/1‑140 (MQ=255)
cgtcgtCAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTgccag > 2:267895/1‑140 (MQ=255)
gtcgtcAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCTCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTgccagc > 1:1261836/1‑140 (MQ=255)
gtcgtcAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTgccagc < 1:740559/140‑1 (MQ=255)
gtcgtcAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTgccagc < 1:745564/140‑1 (MQ=255)
cAAAAGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCg < 1:1536165/140‑1 (MQ=255)
agccagatATCACAGAGAGATTGGTTGTAATTTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCg < 2:1085893/136‑1 (MQ=255)
aaaGAGATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGa < 1:817431/140‑1 (MQ=255)
agagATCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGaaa < 2:1553517/140‑1 (MQ=255)
agaTCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACt > 2:1047185/1‑140 (MQ=255)
aaaTCACAGAGAGATTGGCTGAAATGTTATAAACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACt < 2:909628/138‑1 (MQ=255)
aTCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTaa > 1:985517/1‑140 (MQ=255)
tCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAAt > 1:774713/1‑140 (MQ=255)
tCACAGAGAGATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAAt < 1:267895/140‑1 (MQ=255)
acaGAAAAATTGGCCGTAATGTTAAAGACCTGGCAAAAAACCGCCTCGAGATAACCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGc < 2:124975/140‑1 (MQ=255)
agagagATTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCt > 1:1071634/1‑140 (MQ=255)
agagaTTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCTGc < 1:60632/140‑1 (MQ=255)
gagaTTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCTGCt > 2:676566/1‑140 (MQ=255)
gagaTTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCTGCt < 1:417508/140‑1 (MQ=255)
gagaTTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCTGCt > 2:123310/1‑140 (MQ=255)
agaTTGGCTGTAATGATATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCTgtct > 1:1085893/1‑137 (MQ=255)
gaTTGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCTGCTCa > 1:956387/1‑140 (MQ=255)
tGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCTGCTCAaca < 2:625435/140‑1 (MQ=255)
tGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCTGCTCAaca < 1:1266240/140‑1 (MQ=255)
tGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCTGCTCAaca < 1:117534/140‑1 (MQ=255)
tGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCTGCTCAaca < 2:774713/140‑1 (MQ=255)
tGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCTGCTCAaca < 1:989262/140‑1 (MQ=255)
tGGCTGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCTGCTCAaca < 1:666722/140‑1 (MQ=255)
|
TTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAATCCGCCTCGAGATTATCGCCAATCGCAACCGCCTGATTGACCCACAGAAATTGCAGATCATCGCCACGGCGCTCCACCTGCCAGCCAGCGGAAACTAATGCCTGCTCAACA > NC_000913/3509213‑3509484
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
