Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,573,232 |
G→T |
Q91K (CAG→AAG) |
glgB ← |
1,4‑alpha‑glucan branching enzyme |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,573,232 | 0 | G | T | 100.0%
| 427.1
/ NA
| 123 | Q91K (CAG→AAG) | glgB | 1,4‑alpha‑glucan branching enzyme |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (72/51); total (72/51) |
Only 100 of 123 total aligned reads displayed.
TGACGCCATCCATAGTATCTGCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTGACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCACCCACAC > NC_000913/3573097‑3573367
|
tgACGCCATCCATAGTATCTGCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCa < 2:1837887/140‑1 (MQ=255)
cGCCATCCATAGTATCTGCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGc < 1:344023/140‑1 (MQ=255)
atccatAGTATCTGCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGa > 1:1132703/1‑140 (MQ=255)
atccatAGTATCTGCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGa > 1:318373/1‑140 (MQ=255)
atccatAGTATCTGCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGa > 1:27175/1‑140 (MQ=255)
tccatAGTATCTGCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGac > 1:1082010/1‑140 (MQ=255)
tATCTGCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGcc > 1:1457071/1‑140 (MQ=255)
tCTGCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGTGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCaa > 2:1975239/1‑140 (MQ=255)
tCTGCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCaa > 2:1126662/1‑140 (MQ=255)
tCTGCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCaa > 1:542814/1‑140 (MQ=255)
cTGCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAAc > 2:1378013/1‑140 (MQ=255)
cTGCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAAc > 1:1087668/1‑140 (MQ=255)
gCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTg > 1:1356783/1‑140 (MQ=255)
gCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTg > 1:48901/1‑140 (MQ=255)
tGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATa > 2:491099/1‑140 (MQ=255)
tGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATa > 2:1065435/1‑140 (MQ=255)
cgcgcCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGc > 1:346487/1‑140 (MQ=255)
cgcgcCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGc > 1:1568731/1‑140 (MQ=255)
cgcgcCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGc > 1:556598/1‑140 (MQ=255)
cgcgcCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGc > 2:51/1‑140 (MQ=255)
cgcgcCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGc > 2:1774853/1‑140 (MQ=255)
cgcgcCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGc > 2:1988489/1‑140 (MQ=255)
cgcgcCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGc > 1:1867608/1‑140 (MQ=255)
cgcCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCACCTGATAGCgg > 1:1384013/1‑140 (MQ=255)
cgcCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCgg > 1:152679/1‑140 (MQ=255)
ccTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGaa < 2:463986/140‑1 (MQ=255)
tAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGaaaa < 1:1850559/140‑1 (MQ=255)
tAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGaaaa < 1:226679/140‑1 (MQ=255)
tttCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTc > 1:522829/1‑140 (MQ=255)
tCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCtt > 2:568778/1‑140 (MQ=255)
cATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTa < 1:924064/140‑1 (MQ=255)
ggCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTcgc > 2:1349212/1‑140 (MQ=255)
ggCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTcgc > 2:120337/1‑140 (MQ=255)
cAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAGCAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGaa > 1:119757/1‑140 (MQ=255)
gTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGa < 2:1132703/140‑1 (MQ=255)
gTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGa < 2:27175/140‑1 (MQ=255)
gAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGAcg < 2:1564495/140‑1 (MQ=255)
aGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGAcgc > 2:2027237/1‑140 (MQ=255)
gTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGAcgcc > 2:1189989/1‑140 (MQ=255)
aCCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGAcgccgc < 1:1988489/140‑1 (MQ=255)
aCCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGAcgccgc < 1:1774853/140‑1 (MQ=255)
tCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTaaa > 1:2038952/1‑140 (MQ=255)
tCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTaaa > 1:1639289/1‑140 (MQ=255)
tCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTaaa > 2:1038284/1‑140 (MQ=255)
gATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGaa < 2:1356783/140‑1 (MQ=255)
gATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGaa > 1:1467488/1‑140 (MQ=255)
ataataGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAAt > 2:555748/1‑140 (MQ=255)
taGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATcccc > 2:1131273/1‑140 (MQ=255)
aGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCg < 1:1189989/140‑1 (MQ=255)
aGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCg < 1:1038284/140‑1 (MQ=255)
aGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCg < 2:1523474/140‑1 (MQ=255)
aGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCg < 2:48901/140‑1 (MQ=255)
aGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCg < 1:1286819/140‑1 (MQ=255)
aGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCg < 2:1467488/140‑1 (MQ=255)
ccAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCCACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTg > 1:1538363/1‑140 (MQ=255)
ccAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTg < 1:1378013/140‑1 (MQ=255)
ccAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTg > 1:852775/1‑140 (MQ=255)
cAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGa > 1:742546/1‑140 (MQ=255)
ggCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGt > 1:763545/1‑140 (MQ=255)
ggCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGt > 2:1379454/1‑140 (MQ=255)
ggCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGt < 2:522829/140‑1 (MQ=255)
ggCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGt > 2:551410/1‑140 (MQ=255)
aTCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCga < 1:447954/140‑1 (MQ=255)
ccTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTcc < 2:318373/140‑1 (MQ=255)
ccTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTcc < 1:1039735/140‑1 (MQ=255)
ccTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTcc > 1:438753/1‑140 (MQ=255)
ccTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTcc > 1:45298/1‑140 (MQ=255)
tGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAg < 2:128592/140‑1 (MQ=255)
gATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGtt > 1:670691/1‑140 (MQ=255)
ggtccAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAg > 2:1162786/4‑140 (MQ=255)
ccAAAACGGTAAGGATCATCAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCAAGttt > 2:1321964/1‑140 (MQ=255)
atcatcAATCAGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCg > 2:1933628/1‑140 (MQ=255)
atcaatcaGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGtt < 2:2038952/140‑1 (MQ=255)
atcaatcaGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGtt < 1:758540/140‑1 (MQ=255)
atcaatcaGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGtt > 1:649810/1‑140 (MQ=255)
caatcaGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCa < 2:512887/140‑1 (MQ=255)
atcaGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAAt < 2:1568731/140‑1 (MQ=255)
atcaGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAAt < 1:2027237/140‑1 (MQ=255)
atcaGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAAt < 1:1131273/140‑1 (MQ=255)
tcaGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATc > 1:1608431/1‑140 (MQ=255)
caGGTTTTGCTTACCATGCCAGACAACAGTC‑ACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCAc > 1:1904302/1‑140 (MQ=255)
caGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGtt < 1:1080968/134‑1 (MQ=255)
caGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGtt > 2:1080968/1‑134 (MQ=255)
caGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAAt < 2:848709/138‑1 (MQ=255)
caGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCa > 2:1536792/1‑140 (MQ=255)
caGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCa > 1:1325326/1‑140 (MQ=255)
caGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCa > 1:1835665/1‑140 (MQ=255)
caGGTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCa > 1:1666637/1‑140 (MQ=255)
ggTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCAcc < 2:438753/140‑1 (MQ=255)
agTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCAcc < 2:657880/139‑1 (MQ=255)
gTTTTGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAAT‑CCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCACCca < 2:542814/140‑1 (MQ=255)
ttttGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCACCca < 2:852775/140‑1 (MQ=255)
ttttGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCACCca < 2:649810/140‑1 (MQ=255)
ttttGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCACCca < 1:491099/140‑1 (MQ=255)
ttttGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCACCca < 2:1885571/140‑1 (MQ=255)
ttttGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCACCca < 2:1867608/140‑1 (MQ=255)
ttttGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCACCca < 2:1639289/140‑1 (MQ=255)
ttGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCACCcaca > 2:1739568/1‑140 (MQ=255)
ttGCTTACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCACCcaca < 2:1457071/140‑1 (MQ=255)
tGCTTACCATGCCAGACAGCAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCACCcacac < 2:119757/140‑1 (MQ=255)
|
TGACGCCATCCATAGTATCTGCATGCGCGCCTAAGGTTTCATACGGGCGCAGGTGAGTACCTTCAGATAATAGCCAGGCATCCATTTCCTGGATTAGCGGACCAAAACGGTAAGGATCATCAATCAGGTTTTGCTGACCATGCCAGACAACAGCCAACTGATAGCGGAAAAAATTCTTACGTCGCGGAATGACGCCGCTAAAGAATCCCCGTGAGTCGAGACACTCCAGTTTTGCGAGTTTGCGCCCGGTTTTCGGTTCAATCACCCACAC > NC_000913/3573097‑3573367
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
