Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,927,192 |
G→T |
S13I (AGC→ATC) |
asnA → |
asparagine synthetase A |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,927,192 | 0 | G | T | 100.0%
| 406.3
/ NA
| 118 | S13I (AGC→ATC) | asnA | asparagine synthetase A |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (66/52); total (66/52) |
Only 100 of 122 total aligned reads displayed.
AATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCAGGTAAA > NC_000913/3927059‑3927327
|
aaaGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAAt < 1:974222/140‑1 (MQ=255)
gTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACtt > 2:50894/1‑140 (MQ=255)
ttAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACttt > 2:498648/1‑140 (MQ=255)
gCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTtctc > 2:1878652/1‑140 (MQ=255)
cTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCg < 1:1807445/140‑1 (MQ=255)
ttttATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTc < 2:737394/140‑1 (MQ=255)
tttATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCa > 1:178574/1‑140 (MQ=255)
tttATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCa > 2:1184981/1‑140 (MQ=255)
tttATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCa > 2:629932/1‑140 (MQ=255)
tATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAAc < 2:1514761/140‑1 (MQ=255)
gAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATTATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTTGTGAAATCTCACTTTTCTCGTCAACTGga > 2:313300/1‑140 (MQ=255)
aTGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAAc > 2:1439539/1‑134 (MQ=255)
aTGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAAc < 1:1439539/134‑1 (MQ=255)
aTGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGgaag < 2:1223095/140‑1 (MQ=255)
tGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGgaaga < 1:313300/140‑1 (MQ=255)
tGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGgaaga > 2:2064252/1‑140 (MQ=255)
tGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGgaaga < 1:1878652/140‑1 (MQ=255)
tGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGgaaga < 2:1325162/140‑1 (MQ=255)
ttattGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACg > 1:1180226/1‑140 (MQ=255)
tgtgtgTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGGGTATACACAATGCAAGCCGCTTACATTGCCAAACACCGTCAAATTATCTTCGTGACCTCTCACTTTTCTCGTCAACTGGAAGAACGTCTggtat > 2:1149064/1‑137 (MQ=255)
gtgtgtCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCt > 1:904654/1‑140 (MQ=255)
gtgtgtCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCt > 1:1414571/1‑140 (MQ=255)
gtgtgtCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCt > 1:1371235/1‑140 (MQ=255)
gtgtgtCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCt < 1:386122/140‑1 (MQ=255)
gtgtgtCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCt > 1:348634/1‑140 (MQ=255)
tgtgtCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTg > 1:1311176/1‑140 (MQ=255)
gtgtCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGa > 2:1860763/1‑140 (MQ=255)
tgtCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGAt > 1:1189933/1‑140 (MQ=255)
tCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCg > 1:913181/1‑140 (MQ=255)
tCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCg > 1:996845/1‑140 (MQ=255)
tCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCg > 2:1072370/1‑140 (MQ=255)
tCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCg > 1:564154/1‑140 (MQ=255)
tttGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGTCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTcc > 2:645936/1‑140 (MQ=255)
tttGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTcc > 1:1187811/1‑140 (MQ=255)
ttgttgCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCa < 2:1113380/140‑1 (MQ=255)
tgttgCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAg > 2:2004185/1‑140 (MQ=255)
gCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGgcgc < 1:2097165/140‑1 (MQ=255)
cTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGcc < 2:1244338/140‑1 (MQ=255)
cTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGcc < 1:1677447/140‑1 (MQ=255)
cTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGcc > 2:445059/1‑140 (MQ=255)
ttAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCg > 1:1674789/1‑140 (MQ=255)
ttAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCg > 2:1521282/1‑140 (MQ=255)
tAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGa > 1:1417305/1‑140 (MQ=255)
aaGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAg < 2:203784/140‑1 (MQ=255)
aaGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAg < 2:913181/140‑1 (MQ=255)
aaGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGACTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAg < 2:260323/140‑1 (MQ=255)
aGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGc < 1:1450966/140‑1 (MQ=255)
aGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGc > 1:656666/1‑140 (MQ=255)
aGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGc < 2:1460314/140‑1 (MQ=255)
aGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGc > 2:1731475/1‑140 (MQ=255)
gCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTGTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGcc < 1:1163654/140‑1 (MQ=255)
aCAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCgtg > 1:521847/1‑140 (MQ=255)
cAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCgtgt > 2:2071164/1‑140 (MQ=255)
cAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCgtgg > 1:1321239/1‑139 (MQ=255)
aGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGtgtg > 2:883507/1‑140 (MQ=255)
gACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTggg > 2:1085598/1‑140 (MQ=255)
aGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCa < 2:1587082/140‑1 (MQ=255)
aGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAA‑‑‑‑GTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCa > 2:1677220/1‑140 (MQ=255)
gTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCATCTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCAc < 1:1728550/140‑1 (MQ=255)
gTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCAc < 1:1860763/140‑1 (MQ=255)
tataAAAAATGAAAACCGCTTACATTTCCAAACAACGTCAAATTATCTTCGCGGAATCTCACTTTTCTGGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGTCTCCGATTCTTAGCCGTGGGGGGGTTGGCACg > 1:2023962/1‑140 (MQ=255)
tataAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACg < 1:445059/140‑1 (MQ=255)
tataAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACg < 1:2064252/140‑1 (MQ=255)
tataAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACg < 1:50894/140‑1 (MQ=255)
tataAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACg < 2:178574/140‑1 (MQ=255)
tataAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACg < 1:1565209/140‑1 (MQ=255)
ataAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGc < 1:1085598/140‑1 (MQ=255)
aaaaaaTGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAg < 2:254865/140‑1 (MQ=255)
aaaaTGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGa > 2:1349935/1‑140 (MQ=255)
aaaaTGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGa > 1:75710/1‑140 (MQ=255)
aaaTGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGAt < 2:1414571/140‑1 (MQ=255)
aaaTGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGAt < 2:1189933/140‑1 (MQ=255)
aaTGAAAACCGCTTACATTGTCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATa < 1:645936/140‑1 (MQ=255)
aaTGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATa > 2:163221/1‑140 (MQ=255)
aTGAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATaa > 1:1307565/1‑140 (MQ=255)
gAAAACCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACt > 2:319882/1‑140 (MQ=255)
aaaCCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAAt < 2:573843/45‑1 (MQ=255)
aaaCCGCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAAt > 1:573843/1‑45 (MQ=255)
gCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCggg < 2:757962/140‑1 (MQ=255)
gCTTACATTGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCggg < 1:1349935/140‑1 (MQ=255)
gCTTACATTACCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGAATAACTTGTCggg < 1:1043830/140‑1 (MQ=255)
tGCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGaaa < 2:1371235/140‑1 (MQ=255)
gCCAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGTTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGaaaa > 1:1900859/1‑140 (MQ=255)
ccAAACAACGTCAAATTATCTTCGTGCAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGtaaaa > 2:1213027/1‑140 (MQ=255)
ccAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGaaaaa > 1:1361426/1‑140 (MQ=255)
cAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAg < 1:2004185/140‑1 (MQ=255)
cAAACAACGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAg > 1:1475192/1‑140 (MQ=255)
aacaacGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCg < 1:631257/140‑1 (MQ=255)
aacaacGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAA‑‑‑‑GTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGc < 1:1677220/140‑1 (MQ=255)
acaacGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCgt > 2:537875/1‑139 (MQ=255)
caacGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGt < 2:904654/140‑1 (MQ=255)
caacGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGt > 2:976966/1‑140 (MQ=255)
caacGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGt < 1:724355/140‑1 (MQ=255)
aaacGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGt < 2:1341105/139‑1 (MQ=255)
cGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCa > 2:2104874/1‑140 (MQ=255)
cGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCa > 2:1769870/1‑140 (MQ=255)
cGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCA‑‑CAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCAgg > 1:273051/1‑140 (MQ=255)
cGTCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGCTTGGCACGCAGGATAACTTGTCGGGCTAGAAAAATGCGGCGCa > 2:1089119/1‑140 (MQ=255)
tCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTTTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCAgt > 2:1709992/1‑139 (MQ=255)
tCAAATTATCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCAgg > 1:1069681/1‑140 (MQ=255)
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AATCAAAAGTGAGTTAGGCTTTTTATTGAATGATTATTGCATGTGTGTCGGTTTTTGTTGCTTAATCATAAGCAACAGGACGCAGGAGTATAAAAAATGAAAACCGCTTACATTGCCAAACAACGTCAAATTAGCTTCGTGAAATCTCACTTTTCTCGTCAACTGGAAGAACGTCTGGGGCTGATCGAAGTCCAGGCGCCGATTCTTAGCCGTGTGGGGGATGGCACGCAGGATAACTTGTCGGGCTGTGAAAAAGCGGTGCAGGTAAA > NC_000913/3927059‑3927327
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
