Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,979,233 |
C→A |
F211L (TTC→TTA) |
wzyE → |
enterobacterial common antigen polymerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,979,233 | 0 | C | A | 100.0%
| 322.0
/ NA
| 95 | F211L (TTC→TTA) | wzyE | enterobacterial common antigen polymerase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (52/43); total (52/43) |
TCCCGGCGATGCTGGTGGTCTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTCGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATGAAG > NC_000913/3979097‑3979369
|
acacGGCGCTGCTGGTGGTCTTCGTTCTCCGCAGGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATGGGCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCt < 2:1476493/137‑1 (MQ=255)
cccGGCGATGCTGGTGGTCTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTa < 2:1804483/140‑1 (MQ=255)
gCGATGCTGGTGGTCTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCt < 2:470215/135‑1 (MQ=255)
gCGATGCTGGTGGTCTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCt > 1:470215/1‑135 (MQ=255)
cGATGCTGGTGGTCTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTc > 1:6172/1‑140 (MQ=255)
cGATGCTGGTGGTCTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTc > 1:161189/1‑140 (MQ=255)
gATGCTGGTGGTCTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTcc < 1:590099/140‑1 (MQ=255)
aTGCTGGTGGTCTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCt < 2:1742771/140‑1 (MQ=255)
tGCTGGTGGTCTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTg > 1:92698/1‑140 (MQ=255)
ggtggtCTACTTTCTACGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTa < 1:175579/140‑1 (MQ=255)
gtggtCTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTAt > 1:327501/1‑140 (MQ=255)
ggtCTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTAttt > 2:1721272/1‑139 (MQ=255)
cTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCa < 1:937157/140‑1 (MQ=255)
aCTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCatt > 2:135215/1‑140 (MQ=255)
ttCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCattatt < 1:1679647/140‑1 (MQ=255)
tGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTcgc > 1:2011622/1‑140 (MQ=255)
gcgcCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTcgcg > 1:1167853/1‑140 (MQ=255)
cgcCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCgg > 1:990198/1‑140 (MQ=255)
cgcCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCgg < 1:1102926/140‑1 (MQ=255)
cgcCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCgg < 1:1467714/140‑1 (MQ=255)
cAGGACAGCAAGGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTg > 1:916451/1‑140 (MQ=255)
cAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTTTCGGCGGCACTCGCTCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCtt > 2:1321903/1‑139 (MQ=255)
gACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGAt < 2:6172/140‑1 (MQ=255)
aCAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTACTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGAtt < 2:129094/140‑1 (MQ=255)
cAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGt > 1:1438032/1‑140 (MQ=255)
cAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGt > 2:131031/1‑140 (MQ=255)
cGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCgg < 2:1064117/124‑1 (MQ=255)
cGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCgg > 1:1064117/1‑124 (MQ=255)
ggCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGAtt > 2:1718175/1‑139 (MQ=255)
ggCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATg < 2:1585534/140‑1 (MQ=255)
cTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCt > 2:38644/1‑140 (MQ=255)
tttttCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTggc > 2:1851521/1‑140 (MQ=255)
cTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTggcggcggc < 2:1362585/140‑1 (MQ=255)
cAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCggcgggcg > 1:1842528/1‑140 (MQ=255)
aCGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCt < 2:156653/140‑1 (MQ=255)
gTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTggg < 1:1639765/140‑1 (MQ=255)
gTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTggg < 2:916451/140‑1 (MQ=255)
tCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTgggg > 1:1206456/1‑140 (MQ=255)
cGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGa < 2:92698/140‑1 (MQ=255)
cTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGAttg < 2:208720/140‑1 (MQ=255)
cTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGAttg < 2:1675449/140‑1 (MQ=255)
tttGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTTCTGGGGAttgt > 2:729538/1‑140 (MQ=255)
gCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGc < 1:1007186/140‑1 (MQ=255)
gCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGc < 2:161189/140‑1 (MQ=255)
gCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGc < 2:990198/140‑1 (MQ=255)
gCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGc < 1:877938/140‑1 (MQ=255)
cTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCa > 2:698558/1‑140 (MQ=255)
gCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGt > 2:977512/1‑140 (MQ=255)
gCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGt > 2:1848556/1‑140 (MQ=255)
cTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTggg < 1:1618543/125‑1 (MQ=255)
cTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTggg > 2:1618543/1‑125 (MQ=255)
cTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGtt > 2:88859/1‑140 (MQ=255)
ttATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTctggc < 1:1341933/140‑1 (MQ=255)
tataTGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTctggct < 2:1438032/140‑1 (MQ=255)
tataTGATTGGCGGCGGCGCTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTctggct < 1:131031/140‑1 (MQ=255)
tatGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTctggctgg > 2:742204/1‑140 (MQ=255)
tatGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTctggctgg < 1:1848556/140‑1 (MQ=255)
ttGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTa > 2:1299018/1‑140 (MQ=255)
ttGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTa > 1:417262/1‑140 (MQ=255)
ttGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGAGTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTa > 1:649507/1‑140 (MQ=255)
ttGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTACTGGCATTATTCGCGGCTGGATTTCGTTGTGGGTGCTGGCGGCGGCGGGCGTGCTGGGGGTTGTTGGCATGTTCTCGCTGGCAcct > 2:1815177/1‑138 (MQ=255)
tGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTaa > 1:947369/1‑140 (MQ=255)
tGTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTaa > 1:702190/1‑140 (MQ=255)
gTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTctggctgg > 1:69652/1‑133 (MQ=255)
gTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTctggctgg < 2:69652/133‑1 (MQ=255)
gTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTaaa > 1:1735089/1‑140 (MQ=255)
gTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTaaa > 1:407177/1‑140 (MQ=255)
gTCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTaaa > 1:129721/1‑140 (MQ=255)
tCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTaaaa > 1:608923/1‑140 (MQ=255)
tCGGCGGCACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTaaaa < 2:947369/140‑1 (MQ=255)
ggcggcACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACg > 2:395901/1‑140 (MQ=255)
ggcggcACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACg > 1:421521/1‑140 (MQ=255)
ggcggcACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACg > 1:1257918/1‑140 (MQ=255)
ggcggcACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACg > 2:103107/1‑140 (MQ=255)
aggcACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCt < 2:20959/139‑1 (MQ=255)
ggcACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTa < 1:977512/140‑1 (MQ=255)
ggcACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTa < 2:1842528/140‑1 (MQ=255)
ggcACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTa < 1:698558/140‑1 (MQ=255)
ggcACTCGCGCCAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTa < 2:417262/140‑1 (MQ=255)
ccAATATCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGgaatgaat > 2:1516063/1‑140 (MQ=255)
tatCATCATCGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGa > 2:1721276/1‑140 (MQ=255)
catcatcGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAgcg < 2:129721/140‑1 (MQ=255)
tcatcGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAgcggc > 2:1650725/1‑140 (MQ=255)
catcGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAgcggcg < 1:2073033/140‑1 (MQ=255)
atcGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAgcggcgt > 2:1717184/1‑139 (MQ=255)
cGCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATg > 2:1567164/1‑140 (MQ=255)
gCATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATGa > 1:1705599/1‑140 (MQ=255)
cATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATGaa < 1:1650725/140‑1 (MQ=255)
cATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATGaa > 2:672259/1‑140 (MQ=255)
cATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATGaa > 1:554994/1‑140 (MQ=255)
cATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATGaa > 1:687086/1‑140 (MQ=255)
cATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATGaa > 2:1203577/1‑140 (MQ=255)
cATTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATGaa > 1:1238046/1‑140 (MQ=255)
aaTTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATGaa < 2:1197310/139‑1 (MQ=255)
aTTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATGAAg < 2:1855343/140‑1 (MQ=255)
aTTAGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATGAAg < 1:742204/140‑1 (MQ=255)
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TCCCGGCGATGCTGGTGGTCTACTTTCTGCGCCAGGACAGCAAAGCGTGGCTGTTTTTCCTCGTCAGCACGGTCGCCTTTGGCTTGCTGACTTATATGATTGTCGGCGGCACTCGCGCCAATATCATCATCGCATTCGCTATCTTCCTGTTTATTGGCATTATTCGCGGCTGGATTTCGTTGTGGATGCTGGCGGCGGCGGGCGTGCTGGGGATTGTTGGCATGTTCTGGCTGGCACTAAAACGCTATGGAATGAATGTGAGCGGCGATGAAG > NC_000913/3979097‑3979369
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
