Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,995,635 |
G→T |
R18L (CGG→CTG) |
yigA → |
conserved protein YigA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,995,635 | 0 | G | T | 100.0%
| 494.4
/ NA
| 142 | R18L (CGG→CTG) | yigA | conserved protein YigA |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (77/65); total (77/65) |
Only 100 of 145 total aligned reads displayed.
GTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCGGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACGTAAT > NC_000913/3995498‑3995771
|
gtcTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCtgg > 2:859888/1‑140 (MQ=255)
gCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGAt > 2:974468/1‑140 (MQ=255)
ccTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTTTTGAtt > 2:1067583/1‑140 (MQ=255)
ccTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGAtt > 1:343782/1‑140 (MQ=255)
ccTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGAtt > 1:144092/1‑140 (MQ=255)
tGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTAt < 2:343782/140‑1 (MQ=255)
tCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTaa > 1:2057806/1‑140 (MQ=255)
cccGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGTTTTTCGTTTATCTTATTTAAAATCCtta > 2:2032634/1‑138 (MQ=255)
cccGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGa < 1:29031/140‑1 (MQ=255)
atatatGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGttttt < 1:859888/140‑1 (MQ=255)
tatGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTTTCGATTATCCTATTAAAAATCCTGAGTTTTTTAt > 2:648822/1‑140 (MQ=255)
tGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCt < 2:72009/127‑1 (MQ=255)
tGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCt > 1:72009/1‑127 (MQ=255)
tGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATcc > 1:591556/1‑140 (MQ=255)
tGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTAGATTATTTTATTAAAAATCCTGAGTTTTTTATcc > 2:1938708/1‑140 (MQ=255)
cTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTa > 1:48941/1‑140 (MQ=255)
cTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATAACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTa > 1:639291/1‑140 (MQ=255)
tGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTaa > 2:1627532/1‑140 (MQ=255)
gtccGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATg > 2:2122676/3‑140 (MQ=255)
gCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGTAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATg > 1:1691337/1‑140 (MQ=255)
gCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTTACGGAGCTTGATGACCTGGTGGTTTTCGATTATCTTGTTAAAAATCCTGTGTTTTTTATCCGTGAtt > 2:1867388/1‑139 (MQ=255)
gCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTa < 2:252580/131‑1 (MQ=255)
gCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTa > 1:252580/1‑131 (MQ=255)
gCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATg > 1:1508632/1‑140 (MQ=255)
gCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATg > 1:892062/1‑140 (MQ=255)
gCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATg > 1:45778/1‑140 (MQ=255)
gCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATg > 1:401653/1‑140 (MQ=255)
gCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATg > 1:217166/1‑140 (MQ=255)
gCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATg > 2:2106239/1‑140 (MQ=255)
gCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATg > 2:1049925/1‑140 (MQ=255)
gCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGGTTTTTATCCGTAAtt > 2:2136829/1‑139 (MQ=255)
gCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGGTTTTTATCCCTAAtt > 2:774878/1‑139 (MQ=255)
gCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAACCCTGAGTTTTTTATCCGTAATg > 1:1717992/1‑140 (MQ=255)
cccGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATgc > 2:462117/1‑140 (MQ=255)
cccGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATgc > 2:911135/1‑140 (MQ=255)
ggcggTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATgcgcg < 2:45778/140‑1 (MQ=255)
ggcggTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATgcgcg < 1:974468/140‑1 (MQ=255)
ggcggTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATgcgcg < 2:540211/140‑1 (MQ=255)
cggTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATgcgcgcg < 1:1867388/140‑1 (MQ=255)
tACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAACCCTGAGTTTTTTATCCGTAATGCGCGCGCAg < 2:1717992/140‑1 (MQ=255)
cATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTa < 1:1049925/140‑1 (MQ=255)
tGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGa < 1:2032634/140‑1 (MQ=255)
tCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAg > 2:625152/1‑140 (MQ=255)
tACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCg < 1:1109261/140‑1 (MQ=255)
cgacgGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGAt > 1:1872408/1‑140 (MQ=255)
cgacgGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGAt > 2:393058/1‑140 (MQ=255)
cgacgGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGAt > 1:1522085/1‑140 (MQ=255)
cgacgGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGAt > 2:1362165/1‑140 (MQ=255)
cgacgGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGAt > 2:1222035/1‑140 (MQ=255)
cgGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATAct > 2:1782585/1‑139 (MQ=255)
gATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACgtt > 2:19047/1‑139 (MQ=255)
aTTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAg < 2:8708/124‑1 (MQ=255)
ttATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGc < 2:1522085/140‑1 (MQ=255)
tATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGcc < 1:625152/140‑1 (MQ=255)
cTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGTCCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCg < 1:969055/140‑1 (MQ=255)
cTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATTCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCAATACGTGTGCCGCATCCg > 1:1396641/1‑140 (MQ=255)
cTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCg > 2:812807/1‑140 (MQ=255)
cTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGACGATTATCCGATTAAAAAACCTGAGTTTTTTATCCGTAATGCGCGCGCATTAGAAGCGATACGTGTGCCGCATccc > 2:2054886/1‑139 (MQ=255)
aaGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTAcg > 2:978718/1‑140 (MQ=255)
cAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCgg < 1:1454322/140‑1 (MQ=255)
cAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCgg < 1:462117/140‑1 (MQ=255)
aCCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCa < 1:1938708/140‑1 (MQ=255)
aCCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCa > 2:473859/1‑140 (MQ=255)
aCCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCa > 1:183019/1‑140 (MQ=255)
aCCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCa > 2:1356944/1‑140 (MQ=255)
aCCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCa > 2:1398297/1‑140 (MQ=255)
aCCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGGTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCa > 1:59551/1‑140 (MQ=255)
aCTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTgg < 1:1222035/140‑1 (MQ=255)
aCTGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTgg < 2:2122267/140‑1 (MQ=255)
tGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTc < 1:1362165/140‑1 (MQ=255)
tGCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTc < 1:393058/140‑1 (MQ=255)
gCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCg > 1:156952/1‑140 (MQ=255)
gCAGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGCACGCGGCACCGTTTCGTTGGTct > 2:311914/1‑139 (MQ=255)
aGGAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAg < 1:774878/140‑1 (MQ=255)
ggAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGt < 1:2122676/140‑1 (MQ=255)
ggAAACACTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTAGTTGGTCGAGt < 2:1691337/140‑1 (MQ=255)
acTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGcaca > 1:1260087/1‑140 (MQ=255)
acTCACGGAGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGcaca > 1:1017373/1‑140 (MQ=255)
aGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCcgc > 1:945483/1‑140 (MQ=255)
aGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCcgc < 2:144092/140‑1 (MQ=255)
aGCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCcgc < 2:608496/140‑1 (MQ=255)
gCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCcgcg < 1:864940/140‑1 (MQ=255)
gCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCcgcg < 2:156952/140‑1 (MQ=255)
gCTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCcgcg < 2:183019/140‑1 (MQ=255)
gCTTGATGACCTGGCGGATGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGGAATGCGCGCGCAGTAGTAGCGATACGTGTGCCGCCTCCGGTACGCGGCACCGATTCGTTGGCCGAGTGGCACATGGccccct > 2:194223/1‑137 (MQ=255)
cTTGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCgcgc > 2:1219665/1‑140 (MQ=255)
ttGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCa < 1:115843/140‑1 (MQ=255)
ttGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCa < 1:1398297/140‑1 (MQ=255)
ttGATGACCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCa < 1:473859/140‑1 (MQ=255)
gatgaCCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACg < 1:19047/140‑1 (MQ=255)
gatgaCCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACg < 2:945483/140‑1 (MQ=255)
gatgaCCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACg < 2:892062/140‑1 (MQ=255)
gatgaCCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACg > 1:1299532/1‑140 (MQ=255)
gatgaCCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACg < 1:13787/140‑1 (MQ=255)
gatgaCCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACg < 1:1605290/140‑1 (MQ=255)
atgaCCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACGt < 1:896088/140‑1 (MQ=255)
atgaCCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACGt < 2:250490/140‑1 (MQ=255)
gaCCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACGTaa < 1:779251/140‑1 (MQ=255)
gaCCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCAATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACGTaa < 2:1396641/140‑1 (MQ=255)
aCCTGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACGTAAt < 1:1067583/140‑1 (MQ=255)
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GTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTCTACGACGGATTTATTCATCTATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCGGGCGGTTGTCGATTATCTGATTAAAAATCCTGAGTTTTTTATCCGTAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGGTCGAGTGGCACATGGCCCGCGCACGTAAT > NC_000913/3995498‑3995771
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
