Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F48 I1 R1	508	125.6	4303852	99.2%	4269421	139.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,270,342	C→A	I35I (ATC→ATA)	yjbQ →	UPF0047 protein YjbQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,270,342	0	C	A	100.0%	347.1 / NA	100	I35I (ATC→ATA)	yjbQ	UPF0047 protein YjbQ
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (45/55); total (45/55)

Only 100 of 102 total aligned reads displayed.

ACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATCGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCAT  >  NC_000913/4270205‑4270474

aCTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAgg                                                                                                                                    <  2:1759225/140‑1 (MQ=255)

  tGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCt                                                                                                                                  <  2:2148823/140‑1 (MQ=255)

   gATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCtt                                                                                                                                 <  1:192559/140‑1 (MQ=255)

    aTTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTa                                                                                                                                >  1:2001451/1‑140 (MQ=255)

     ttAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTAc                                                                                                                               <  1:537272/140‑1 (MQ=255)

         gagagTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCa                                                                                                                           >  1:489915/1‑140 (MQ=255)

          agagTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCAt                                                                                                                          <  2:2001451/140‑1 (MQ=255)

              ttttATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGt                                                                                                                      >  1:259905/1‑140 (MQ=255)

              ttttATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGt                                                                                                                      >  1:1983705/1‑140 (MQ=255)

              ttttATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGt                                                                                                                      <  2:229956/140‑1 (MQ=255)

              ttttATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGt                                                                                                                      >  2:1128335/1‑140 (MQ=255)

              tcttATCAAGGAGCAGCAGATGTGGTACCAAGAGACGCTGATGGTGGCCTCCAAATCTCGGGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCCGAGATGCCGCGCGGTAACATAGTCTAACTGCCCCTGt                                                                                                                      <  2:1902950/138‑1 (MQ=255)

               tttATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGtt                                                                                                                     <  1:227068/140‑1 (MQ=255)

                ttATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTtg                                                                                                                    <  2:1294979/140‑1 (MQ=255)

                ttATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTtg                                                                                                                    <  1:1216570/140‑1 (MQ=255)

                  aTCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTtgct                                                                                                                  <  1:1748876/140‑1 (MQ=255)

                   tCAAGGAGCAGCACATGTGGTATCAAATGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTtgctg                                                                                                                 <  1:708863/140‑1 (MQ=255)

                   tCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGTTTACTGCATCTGTtgctg                                                                                                                 <  2:1938602/140‑1 (MQ=255)

                   tCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTtgctg                                                                                                                 <  1:457531/140‑1 (MQ=255)

                   tCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTtgctg                                                                                                                 <  2:629204/140‑1 (MQ=255)

                   tCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTtgctg                                                                                                                 <  2:1759892/140‑1 (MQ=255)

                   tCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTtgctg                                                                                                                 >  1:507247/1‑140 (MQ=255)

                   acAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTtgctg                                                                                                                 <  2:546854/139‑1 (MQ=255)

                      aGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCaa                                                                                                              <  1:112030/140‑1 (MQ=255)

                      aGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCaa                                                                                                              >  1:1697972/1‑140 (MQ=255)

                       ggAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAAc                                                                                                             <  2:1930422/140‑1 (MQ=255)

                        gAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACa                                                                                                            >  1:680326/1‑140 (MQ=255)

                         agcagcACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACAt                                                                                                           <  1:720914/140‑1 (MQ=255)

                         agcagcACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACAt                                                                                                           <  1:496267/140‑1 (MQ=255)

                           cagcaCATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATAc                                                                                                         >  1:519191/1‑140 (MQ=255)

                           cagcaCATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATAc                                                                                                         >  1:24824/1‑140 (MQ=255)

                           cagcaCATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATAc                                                                                                         <  2:2062562/140‑1 (MQ=255)

                              cacaTGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTc                                                                                                      >  2:82589/1‑140 (MQ=255)

                                 aTGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGc                                                                                                   <  1:1981357/140‑1 (MQ=255)

                                 aTGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGc                                                                                                   <  2:1960629/140‑1 (MQ=255)

                                   gtgGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCct                                                                                                 >  2:841172/1‑140 (MQ=255)

                                       tATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCctctct                                                                                             <  1:913811/140‑1 (MQ=255)

                                        aTCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTg                                                                                            >  1:1518615/1‑140 (MQ=255)

                                        aTCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTg                                                                                            <  1:2115056/140‑1 (MQ=255)

                                         tCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGa                                                                                           <  2:507247/140‑1 (MQ=255)

                                         tCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGa                                                                                           >  1:1339941/1‑140 (MQ=255)

                                         acAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGa                                                                                           <  2:739554/139‑1 (MQ=255)

                                         acAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGa                                                                                           <  2:1770984/139‑1 (MQ=255)

                                          cAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGac                                                                                          >  1:257406/1‑140 (MQ=255)

                                           aaaaGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGaca                                                                                         <  1:1128335/140‑1 (MQ=255)

                                            aaaGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGacac                                                                                        <  2:1983705/140‑1 (MQ=255)

                                              aGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACtt                                                                                      <  2:1100891/140‑1 (MQ=255)

                                                aCGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTaa                                                                                    >  1:689694/1‑140 (MQ=255)

                                                aCGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTaa                                                                                    >  1:786934/1‑140 (MQ=255)

                                                 cGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAAt                                                                                   <  2:257406/140‑1 (MQ=255)

                                                   cTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATga                                                                                 >  2:1487333/1‑140 (MQ=255)

                                                   cTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATga                                                                                 >  1:527195/1‑140 (MQ=255)

                                                   cTCACGCTTAGCACCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATga                                                                                 >  1:1761482/1‑140 (MQ=255)

                                                        gCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACt                                                                            >  2:420610/1‑140 (MQ=255)

                                                            aGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCgt                                                                        >  2:912721/1‑139 (MQ=255)

                                                            aGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGa                                                                        >  2:1955907/1‑140 (MQ=255)

                                                              cgcCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATc                                                                      >  2:1058880/1‑140 (MQ=255)

                                                               gcCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATcc                                                                     <  2:1518615/140‑1 (MQ=255)

                                                                ccAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATccc                                                                    >  1:399069/1‑140 (MQ=255)

                                                                  aaaTCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCAc                                                                  >  2:1432914/1‑140 (MQ=255)

                                                                    aTCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCg                                                                <  2:24824/140‑1 (MQ=255)

                                                                        cGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACg                                                            >  1:1472682/1‑140 (MQ=255)

                                                                          tGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGcc                                                          <  2:680326/140‑1 (MQ=255)

                                                                          tGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGcc                                                          <  1:1955907/140‑1 (MQ=255)

                                                                               ttCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGAc                                                     >  1:603679/1‑140 (MQ=255)

                                                                                tCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACa                                                    >  2:218712/1‑140 (MQ=255)

                                                                                tCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACa                                                    >  1:1160298/1‑140 (MQ=255)

                                                                                    cTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGa                                                <  2:838739/140‑1 (MQ=255)

                                                                                      ggTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCTCACCGTACGCCACGACATGGAGc                                              >  1:1813899/1‑140 (MQ=255)

                                                                                         aaCGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGtt                                           >  2:1147518/1‑140 (MQ=255)

                                                                                           cGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCTTCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCTCCGTACGCCACGACATGGAGCGtttt                                         <  1:1058880/140‑1 (MQ=255)

                                                                                           cGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGtttt                                         >  2:1546088/1‑140 (MQ=255)

                                                                                           cGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGtttt                                         <  1:587502/140‑1 (MQ=255)

                                                                                           aggATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGtttt                                         <  2:584353/139‑1 (MQ=255)

                                                                                              aTGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTtc                                      >  2:394697/1‑140 (MQ=255)

                                                                                                gAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTtcct                                    <  1:66962/140‑1 (MQ=255)

                                                                                                 aaaTTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTtcctc                                   <  2:1160298/140‑1 (MQ=255)

                                                                                                  aaTTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTtcctcc                                  >  2:1499332/1‑140 (MQ=255)

                                                                                                     tCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATCCCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCa                               <  2:1878823/140‑1 (MQ=255)

                                                                                                     tCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCa                               <  2:259905/140‑1 (MQ=255)

                                                                                                     tCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCa                               <  2:1697972/140‑1 (MQ=255)

                                                                                                     tCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCa                               <  1:218712/140‑1 (MQ=255)

                                                                                                     tCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCa                               <  1:264553/140‑1 (MQ=255)

                                                                                                      cTGAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCAc                              >  1:2042413/1‑140 (MQ=255)

                                                                                                        gAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCg                            >  2:323400/1‑140 (MQ=255)

                                                                                                        gAATCAGCTGGCTGATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCg                            >  1:114869/1‑140 (MQ=255)

                                                                                                                tggctgATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGAc                    <  1:853905/140‑1 (MQ=255)

                                                                                                                    tgATATGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACg                <  2:603679/140‑1 (MQ=255)

                                                                                                                       aatGCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGaa             <  1:122526/139‑1 (MQ=255)

                                                                                                                          gCCGCGCGTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAAtt          <  2:1761482/140‑1 (MQ=255)

                                                                                                                            cgcgcgTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTAt        >  1:425128/1‑140 (MQ=255)

                                                                                                                            cgcgcgTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTAt        >  2:254706/1‑140 (MQ=255)

                                                                                                                            cgcgcgTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTAt        >  2:1160312/1‑140 (MQ=255)

                                                                                                                             gcgcgTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATg       >  2:574480/1‑140 (MQ=255)

                                                                                                                              cgcgTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGa      >  1:238289/1‑140 (MQ=255)

                                                                                                                              cgcgTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGa      >  1:1173687/1‑140 (MQ=255)

                                                                                                                                cgTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGc    <  1:82589/140‑1 (MQ=255)

                                                                                                                                cgTTAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGc    <  1:1837310/140‑1 (MQ=255)

                                                                                                                                  ttAACATAGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCAt  <  1:574480/140‑1 (MQ=255)

                                                                                                                                  atAACATAGGCTTACTGCATCTGTTGCTGCAACATTCCACCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCAt  <  2:786934/139‑1 (MQ=255)

ACTGATTAAGAGAGTTTTATCAAGGAGCAGCACATGTGGTATCAAAAGACGCTCACGCTTAGCGCCAAATCTCGTGGGTTTCATCTGGTAACGGATGAAATTCTGAATCAGCTGGCTGATATGCCGCGCGTTAACATCGGCTTACTGCATCTGTTGCTGCAACATACCTCCGCCTCTCTGACACTTAATGAGAACTGCGATCCCACCGTACGCCACGACATGGAGCGTTTTTTCCTCCGCACCGTTCCCGACAACGGAAATTATGAGCAT  >  NC_000913/4270205‑4270474

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A