Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,362,098 |
G→T |
intergenic (‑164/+453) |
cadC ← / ← pheU |
DNA‑binding transcriptional activator CadC/tRNA‑Phe |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,362,098 | 0 | G | T | 100.0%
| 622.1
/ NA
| 178 | intergenic (‑164/+453) | cadC/pheU | DNA‑binding transcriptional activator CadC/tRNA‑Phe |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (97/81); total (97/81) |
Only 100 of 180 total aligned reads displayed.
TGCAATGATAATTGCCACAACCTATTTTTACCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGAGAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATGAGCAAGCGAAC > NC_000913/4361963‑4362234
|
tgCAATGATAATTGCCACAACCTATTTTTACCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAAcc < 1:1119527/140‑1 (MQ=255)
cAATGATAATTGCCACAACCTATTTTTACCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAg < 1:533457/140‑1 (MQ=255)
cAATGATAATTGCCACAACCTATTTTTACCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAg < 2:1408714/140‑1 (MQ=255)
cAATGATAATTGCCACAACCTATTTTTACCAACTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAg < 2:1557630/140‑1 (MQ=255)
aaaTGATAATTGCCACACCCTATTTTTACCATCTATAGATGGGTTTATTTACATATTATTGGTAAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAg < 1:876928/139‑1 (MQ=255)
aaaTGATAATTGCCACAACCTATTTTTACCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAg < 2:1000082/139‑1 (MQ=255)
aaTGATAATTGCCACAACCTATTTTTACCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGa < 2:236296/140‑1 (MQ=255)
aTAATTGCCACAACCTATTTTTACCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTa > 2:1348171/1‑140 (MQ=255)
aTTGCCACAACCTATTTTTACCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAata < 1:1050651/140‑1 (MQ=255)
aTTGCCACAACCTATTTTTACCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAata > 2:762070/1‑140 (MQ=255)
gCCACAACCTATTTTTACCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTc > 2:1289873/1‑140 (MQ=255)
caACCTATTTTTACCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTa > 2:1153767/1‑140 (MQ=255)
tttttACCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCaa < 1:1235178/140‑1 (MQ=255)
ttttACCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCaaa < 1:703381/140‑1 (MQ=255)
aCCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATtc > 1:1969189/1‑140 (MQ=255)
ccATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATtca < 1:762070/140‑1 (MQ=255)
ccATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATtca > 1:1419011/1‑140 (MQ=255)
ccATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATtca < 1:1188308/140‑1 (MQ=255)
ccATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATtca < 1:788568/140‑1 (MQ=255)
cTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTcatcat > 1:1297181/1‑140 (MQ=255)
tataGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCatcatc > 1:1487740/1‑140 (MQ=255)
ggTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCaa > 2:693258/1‑140 (MQ=255)
ggTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCaa > 1:883627/1‑140 (MQ=255)
gTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCaaa > 1:1622088/1‑140 (MQ=255)
gTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCaaa > 1:32769/1‑140 (MQ=255)
tttatttaCATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGTTTTTACTGATTACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCaaat > 2:1830852/1‑139 (MQ=255)
tttatttaCATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGc > 1:909693/1‑135 (MQ=255)
tttatttaCATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAg > 2:1948204/1‑140 (MQ=255)
tttatttaCATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAg > 2:797073/1‑140 (MQ=255)
tttatttaCATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAg > 2:1556676/1‑140 (MQ=255)
tttatttaCATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAg > 2:1588135/1‑140 (MQ=255)
tttatttaCATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAg > 1:1065132/1‑140 (MQ=255)
tttatttaCATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAg > 2:876996/1‑140 (MQ=255)
tttatttaCATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAg > 1:352470/1‑140 (MQ=255)
tttatttaCATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAg > 1:1946900/1‑140 (MQ=255)
tttatttaCATATTATTGGGGAATGCAAGACGCTATTTTTACCAGCCATAAACTTCTTGATTACATATTATTACGAAAGGATTTTACTGATAACCAGACGTAATCTTCCTTACCATCAAAATTCATCATCTTTGACATAg > 2:1607985/1‑140 (MQ=255)
tatttaCATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGaa > 2:1631034/1‑140 (MQ=255)
tatttaCATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGaa > 1:2043381/1‑140 (MQ=255)
tttaCATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGaaaa < 1:829510/140‑1 (MQ=255)
tttaCATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTAATGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGaaaa < 1:596478/140‑1 (MQ=255)
aaatatTATTGGTAAATGCAATTCGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAGCCAGAAGTAATCTTCCTTACAATCAAAATTCATCATCTTTGCCAAAGAAAAATg < 2:1714437/138‑1 (MQ=255)
atatTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGtt > 1:665519/1‑140 (MQ=255)
atatTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGtt > 1:1697296/1‑140 (MQ=255)
atatTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATAAAAATTCATCATCTTTGCCAAAGAAAAATGtt < 1:1900139/140‑1 (MQ=255)
attattGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCa < 1:50398/140‑1 (MQ=255)
tattGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGa > 2:2120214/1‑140 (MQ=255)
tattGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGa > 2:1082188/1‑140 (MQ=255)
attGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGaa > 2:410253/1‑140 (MQ=255)
gTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAaata > 2:1513610/1‑140 (MQ=255)
aaaTGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAaataat < 2:793872/139‑1 (MQ=255)
aaTGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATc > 2:340826/1‑140 (MQ=255)
aaTGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATc > 2:417569/1‑140 (MQ=255)
aaTGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATc > 1:1930193/1‑140 (MQ=255)
aaTGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATc > 1:418585/1‑140 (MQ=255)
aaTGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATc > 1:1380008/1‑140 (MQ=255)
tGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCa > 1:478130/1‑140 (MQ=255)
tGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCa > 2:1537330/1‑140 (MQ=255)
tGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCa > 2:1726282/1‑140 (MQ=255)
cAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATg < 2:1388381/140‑1 (MQ=255)
cAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATg < 1:2120214/140‑1 (MQ=255)
aTTTTAGCCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGt < 1:535498/140‑1 (MQ=255)
tACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGa < 2:328717/140‑1 (MQ=255)
tACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGa < 1:1082188/140‑1 (MQ=255)
gCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACt < 1:340826/140‑1 (MQ=255)
ccATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACtt > 2:1645596/1‑140 (MQ=255)
aTAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTAc < 1:1289873/140‑1 (MQ=255)
tAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACt < 2:455875/140‑1 (MQ=255)
aaaCTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACtt > 2:897336/1‑139 (MQ=255)
aaaCTTCTTGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTa < 1:1607985/140‑1 (MQ=255)
tcttGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTa < 2:352470/140‑1 (MQ=255)
cttGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTat > 2:534362/1‑139 (MQ=255)
cttGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTaa > 2:1514203/1‑140 (MQ=255)
cttGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTaa > 1:2083094/1‑140 (MQ=255)
tGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATg < 2:665519/140‑1 (MQ=255)
tGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATg < 1:897336/140‑1 (MQ=255)
tGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATg < 2:26176/140‑1 (MQ=255)
tGATTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATg < 2:1487740/140‑1 (MQ=255)
aTTACATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGa < 2:1930193/140‑1 (MQ=255)
cATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGt < 2:478130/140‑1 (MQ=255)
cATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGt < 1:1405728/140‑1 (MQ=255)
cATAGTATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGt < 1:1348171/140‑1 (MQ=255)
tATTACGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTc > 1:175259/1‑140 (MQ=255)
cGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGc < 2:2083094/140‑1 (MQ=255)
cGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGc > 2:1237931/1‑140 (MQ=255)
cGAAAGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGc < 1:1153767/140‑1 (MQ=255)
aaGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATg < 2:1380008/140‑1 (MQ=255)
aaGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATg < 2:1946900/140‑1 (MQ=255)
aaGGATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATg > 1:251111/1‑140 (MQ=255)
ggATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATGAg > 2:908865/1‑140 (MQ=255)
ggATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATGAg > 2:639273/1‑140 (MQ=255)
ggATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATGAg > 2:187261/1‑140 (MQ=255)
ggATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATGAg > 2:1354533/1‑140 (MQ=255)
ggATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATGAg > 2:1139128/1‑140 (MQ=255)
ggATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATGAg > 1:1580102/1‑140 (MQ=255)
ggATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATGAg > 1:1280935/1‑140 (MQ=255)
ggATTTTACTGATAACCAGAAGTAATATTCCTTACCATCAAAATGCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAATATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATGAg > 2:2019230/1‑140 (MQ=255)
tACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATGAGCAAg > 2:1977202/1‑138 (MQ=255)
tACTGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATGAGCAAGCg < 1:410253/140‑1 (MQ=255)
atGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATGAGCAAGCGaa < 2:175259/139‑1 (MQ=255)
tGATAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATGAGCAAGCGAAc < 1:797073/140‑1 (MQ=255)
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TGCAATGATAATTGCCACAACCTATTTTTACCATCTATAGATGGGTTTATTTACATATTATTGGTGAATGCAAGACGTTATTTTTACCAGCCATAAACTTCTTGATTACATAGTATTACGAAAGGATTTTACTGAGAACCAGAAGTAATATTCCTTACCATCAAAATTCATCATCTTTGCCAAAGAAAAATGTTCAGAAAATAATCCATGGAAAATTGTCCGGAGCACTTACTATTTTAATGGATTGTTAGTCTTTGCATGAGCAAGCGAAC > NC_000913/4361963‑4362234
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
