Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,383,500 |
C→A |
A286A (GCC→GCA) |
epmA → |
EF‑P‑lysine lysyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,383,500 | 0 | C | A | 98.3%
| 389.3
/ ‑0.4
| 116 | A286A (GCC→GCA) | epmA | EF‑P‑lysine lysyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base A (57/57); total (58/58) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
Only 100 of 116 total aligned reads displayed.
AAGGTATTGAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCCTTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTGAAAAATTACT > NC_000913/4383364‑4383635
|
aaGGTATTGAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTg > 1:1931492/1‑140 (MQ=255)
gTATTGAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGaaa > 2:1718939/1‑140 (MQ=255)
gTATTGAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGaaa > 1:332776/1‑140 (MQ=255)
gTATTGAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGaaa < 1:383839/140‑1 (MQ=255)
aTTGAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGt > 1:1691322/1‑140 (MQ=255)
aTTGAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGt > 1:1609836/1‑140 (MQ=255)
aTTGAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGt > 2:697731/1‑140 (MQ=255)
aTTGAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGt < 1:626219/140‑1 (MQ=255)
aTTGAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGt > 1:673834/1‑140 (MQ=255)
ttGAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTc > 2:576188/1‑140 (MQ=255)
gAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGt < 1:1911453/137‑1 (MQ=255)
gAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGt > 2:1911453/1‑137 (MQ=255)
aGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGt < 1:597880/140‑1 (MQ=255)
aGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGt < 1:2017696/140‑1 (MQ=255)
aGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGt > 1:843267/1‑140 (MQ=255)
cTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCTGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTAt > 2:1766581/1‑140 (MQ=255)
cTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTAt > 1:956358/1‑140 (MQ=255)
tGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATg > 1:1117464/1‑140 (MQ=255)
ggCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGaaa > 1:1425826/1‑130 (MQ=255)
ggCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGaaa < 2:1425826/130‑1 (MQ=255)
ggCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGc > 2:1702921/1‑140 (MQ=255)
gCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGcc > 1:147600/1‑140 (MQ=255)
gCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGcc > 2:1404690/1‑140 (MQ=255)
gCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGcc > 2:439815/1‑140 (MQ=255)
gCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGcc > 2:1482569/1‑140 (MQ=255)
aaTGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGa < 2:287090/140‑1 (MQ=255)
aaTGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGa < 1:1482569/140‑1 (MQ=255)
tGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACt > 1:1412557/1‑140 (MQ=255)
aTGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGc < 1:635666/140‑1 (MQ=255)
aTGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGc < 2:1117464/140‑1 (MQ=255)
aTGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGc < 1:1016866/140‑1 (MQ=255)
aTGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGc < 2:31269/140‑1 (MQ=255)
tGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCg < 2:147600/140‑1 (MQ=255)
tGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCg < 2:101021/140‑1 (MQ=255)
tGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCg < 1:1817739/140‑1 (MQ=255)
aaTTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTg < 1:1125019/140‑1 (MQ=255)
aaTTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTg < 2:1931492/140‑1 (MQ=255)
ttGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGc > 2:1928576/1‑140 (MQ=255)
gACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATACCCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCAt < 1:1182284/140‑1 (MQ=255)
gACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCAt < 1:33524/140‑1 (MQ=255)
gACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCAt < 2:1691322/140‑1 (MQ=255)
gACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCAt < 2:1609836/140‑1 (MQ=255)
gACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCAt < 2:1824942/140‑1 (MQ=255)
gACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCAt < 1:627479/140‑1 (MQ=255)
gACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCAt < 2:497619/140‑1 (MQ=255)
gACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCAt < 1:1588102/140‑1 (MQ=255)
gACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCAt < 1:902777/140‑1 (MQ=255)
aCGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCAtt < 1:1947015/140‑1 (MQ=255)
gATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAACGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAgg < 1:1353661/140‑1 (MQ=255)
aTGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGgt > 2:2038563/1‑140 (MQ=255)
tGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCCTTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAggcg > 2:92673/1‑138 (MQ=255)
tGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGgtg > 1:1791850/1‑140 (MQ=255)
gCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGgtgt < 2:1052463/140‑1 (MQ=255)
cGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGa < 2:843267/140‑1 (MQ=255)
tGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATc < 2:1478393/140‑1 (MQ=255)
tGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATc < 2:1866972/140‑1 (MQ=255)
gAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCg < 2:1157974/140‑1 (MQ=255)
agcaACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAGGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTg > 2:1217842/1‑140 (MQ=255)
aaacaacGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGt < 2:12027/139‑1 (MQ=255)
ttGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGgcg > 2:1877753/1‑140 (MQ=255)
tGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGgcgc < 2:332776/140‑1 (MQ=255)
aaCAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTg < 1:2149675/140‑1 (MQ=255)
aGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGgcg > 1:848505/1‑140 (MQ=255)
aGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGAATGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGgcg > 1:483175/1‑140 (MQ=255)
aTAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGcgcg < 1:815853/140‑1 (MQ=255)
ccGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGgaga > 2:1327594/1‑140 (MQ=255)
gTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGaca < 1:2038563/140‑1 (MQ=255)
gTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGaca < 2:265766/140‑1 (MQ=255)
aGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGTCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTg > 2:1595931/1‑140 (MQ=255)
aGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTg > 2:720252/1‑140 (MQ=255)
gcgcggcgcgcggTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGTTGATGTTTGCGCTGGGCGCGGAGACACTGGCt > 1:2011685/1‑140 (MQ=255)
cgcggcgcgcggTTTGCCGCAGCACCCCATTGACCAGAATGTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTg > 1:1508108/1‑140 (MQ=255)
cgcggcgcgcggTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTg < 2:1513085/140‑1 (MQ=255)
cggcgcgcggTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGaa > 2:1101346/1‑140 (MQ=255)
cgcggTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGc < 1:1970043/131‑1 (MQ=255)
cgcggTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGc > 2:1970043/1‑131 (MQ=255)
cgcggTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCAt < 1:697731/140‑1 (MQ=255)
gcggTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATc > 1:515376/1‑140 (MQ=255)
tttGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCt < 1:1877753/140‑1 (MQ=255)
tGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCttt < 2:2011685/140‑1 (MQ=255)
agcaCCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGtt < 1:439815/140‑1 (MQ=255)
caCCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGa > 2:1712496/1‑140 (MQ=255)
caCCCCATTGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGa < 1:1667077/140‑1 (MQ=255)
ttGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCa > 1:796726/1‑140 (MQ=255)
tGACCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCAt > 2:1370900/1‑140 (MQ=255)
aCCAGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATaa > 1:1388848/1‑140 (MQ=255)
aGAATCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTc < 1:1766581/140‑1 (MQ=255)
aaTCTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTg > 1:812971/1‑140 (MQ=255)
cTGATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGTCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTGaaa < 2:1791850/140‑1 (MQ=255)
gATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTGaaaaa > 2:1887320/1‑140 (MQ=255)
gATTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTGaaaaa > 2:1059574/1‑140 (MQ=255)
aTTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTGAAAAAt > 1:1782336/1‑140 (MQ=255)
aTTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTGAAAAAt > 2:1768896/1‑140 (MQ=255)
aTTGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTGAAAAAt > 2:1162189/1‑140 (MQ=255)
ttGAAGCATTGAAGGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTGAAAAAtt < 1:1217842/140‑1 (MQ=255)
ttGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTGAAAAAtt < 1:1074778/140‑1 (MQ=255)
ttGAAGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTGAAAAAtt > 2:234442/1‑140 (MQ=255)
aaGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTGAAAAATTGCt > 1:1569215/1‑140 (MQ=255)
aaGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTGAAAAATTACt > 1:1721189/1‑140 (MQ=255)
aaGCATTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTGAAAAATTACt > 2:1044620/1‑140 (MQ=255)
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AAGGTATTGAGCTGGCGAATGGTTTCCATGAATTGACGGATGCCCGTGAGCAGCAACAACGCTTTGAACAAGATAACCGTAAGCGCGCGGCGCGCGGTTTGCCGCAGCACCCCATTGACCAGAATCTGATTGAAGCCTTGAAAGTCGGTATGCCTGACTGTTCCGGCGTGGCATTAGGTGTTGATCGTCTGGTGATGTTGGCGCTGGGCGCGGAGACACTGGCTGAAGTCATCGCCTTTAGCGTTGACCGGGCATAATTCTGAAAAATTACT > NC_000913/4383364‑4383635
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
