Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,387,485 |
A→C |
L629R (CTG→CGG) |
mscM ← |
miniconductance mechanosensitive channel MscM |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,387,485 | 0 | A | C | 99.0%
| 387.6
/ ‑3.5
| 100 | coding (1886/3324 nt) | mscM | miniconductance mechanosensitive channel MscM |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (52/47); minor base . (0/1); total (52/48) |
| Fisher's exact test for biased strand distribution p-value = 4.80e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.17e-01 |
Only 100 of 103 total aligned reads displayed.
TGTTCCACAGCATATGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCAGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACGGGAAACACGTTCGCGCGGCCAGCCAAAATGAG > NC_000913/4387351‑4387620
|
ttCCACAGCATATGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAAcc < 1:541419/140‑1 (MQ=255)
tCCACAGCATATGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCGGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCg < 2:1538304/140‑1 (MQ=255)
tCCACAGCATATGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCg > 2:298895/1‑140 (MQ=255)
cacaGCATATGGTTGGTAATGTTGTCGCAGCTGCCCTATTTGTTGAGATAAAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGga < 2:418952/140‑1 (MQ=255)
acaGCATATGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGgag > 2:965075/1‑140 (MQ=255)
caGCATATGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGgaga > 2:942312/1‑140 (MQ=255)
gCATATGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCC‑GCGAACCGGAGAAtt < 2:1171818/140‑1 (MQ=255)
cATATGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAAtt > 1:288899/1‑140 (MQ=255)
tatGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGTGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGga < 2:1544532/133‑1 (MQ=255)
tatGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGTGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGga > 1:1544532/1‑133 (MQ=255)
tatGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCa > 2:1297405/1‑140 (MQ=255)
atGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCAc > 1:1050130/1‑140 (MQ=255)
atGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCAc > 2:213032/1‑140 (MQ=255)
atGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCAc < 2:1554861/140‑1 (MQ=255)
atGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGACGTCCCCGCGAACCGGAGAATTCAc > 1:1417576/1‑140 (MQ=255)
tggtAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGgtcg > 1:850888/1‑140 (MQ=255)
gtAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGgtcgtc > 2:1888889/1‑140 (MQ=255)
gtAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGgtcgtc > 1:237587/1‑140 (MQ=255)
gtAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGgtcgtc > 2:1415494/1‑140 (MQ=255)
tAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGtcgtcg < 2:850888/140‑1 (MQ=255)
tAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGtcgtcg < 1:1349800/140‑1 (MQ=255)
aaTGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGa > 2:506135/1‑140 (MQ=255)
aTGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGACGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAg < 2:1417576/140‑1 (MQ=255)
tgttgtCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAgt > 2:536647/1‑139 (MQ=255)
tgtCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGACCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTa > 2:1483984/1‑140 (MQ=255)
gtCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTAt < 1:1297405/140‑1 (MQ=255)
tCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATc > 1:461020/1‑140 (MQ=255)
gccgcTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGa > 2:107766/1‑140 (MQ=255)
cgcTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAAc < 2:461020/140‑1 (MQ=255)
tGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAAcatc > 2:466706/1‑140 (MQ=255)
tGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAAcatc > 1:1747004/1‑140 (MQ=255)
cccTCTTTGTTGAGATACAGCGGAATCCGGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAAcatcat < 2:2014069/140‑1 (MQ=255)
cccTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAAcatcat < 2:1050130/140‑1 (MQ=255)
cccTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAAcatcat > 2:489503/1‑140 (MQ=255)
ctctTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACAtcatca < 1:213032/140‑1 (MQ=255)
tgttgAGATACAGCGGAATCCCGGCCTTTTTCAGGCTTAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGcc > 2:1775197/1‑140 (MQ=255)
tgAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATa > 1:1226213/1‑140 (MQ=255)
tACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAg > 1:416075/1‑140 (MQ=255)
cAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGATCATCATCAGCGCCTTAATCAGCg > 2:1988097/1‑140 (MQ=255)
cAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAAcatcat < 2:779188/123‑1 (MQ=255)
cAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAAcatcat > 1:779188/1‑123 (MQ=255)
cAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCg > 2:1230458/1‑140 (MQ=255)
aGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCgg < 1:536647/140‑1 (MQ=255)
aGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCgg < 1:2052586/140‑1 (MQ=255)
aGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCgg < 1:321594/140‑1 (MQ=255)
aGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCgg < 1:942312/140‑1 (MQ=255)
aGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCgg < 1:319333/140‑1 (MQ=255)
gCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGc > 1:1842428/1‑140 (MQ=255)
gCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGc > 2:186701/1‑140 (MQ=255)
aaTCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACaa > 1:1423037/1‑140 (MQ=255)
aaTCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTAACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACaa < 1:1988097/140‑1 (MQ=255)
aTCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAAt > 1:1128777/1‑140 (MQ=255)
tCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATa > 2:399363/1‑140 (MQ=255)
tCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATa > 1:1904045/1‑140 (MQ=255)
ccGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAg > 2:926875/1‑140 (MQ=255)
cGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGc > 1:705126/1‑140 (MQ=255)
ggCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGcc < 1:1230458/140‑1 (MQ=255)
gCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGGGGATAAAGCAAAGCGGTCCCCGCGAACCGGAGAATTCACTGTCGTCGAGGTTATCTAACATCATCATCGCCATAATCAGCGGTACAATAAGccc > 2:1443948/1‑140 (MQ=255)
gCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGccc > 1:23758/1‑140 (MQ=255)
gcTTTTTAGGGCTAGGGGTAACCACCGCCAGAGCACCGCAAATGAGGATAAAGCAAAGCCGAGCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCAATAATCAGCGGCACAATAAGCCCg < 2:1732572/139‑1 (MQ=255)
cTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGa < 1:926875/140‑1 (MQ=255)
cTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGa < 1:186701/140‑1 (MQ=255)
tttttCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGAt < 2:1128777/140‑1 (MQ=255)
tttttCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGAt < 1:506135/140‑1 (MQ=255)
tttttCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGAt < 1:489503/140‑1 (MQ=255)
tttttCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGAt < 1:1017316/140‑1 (MQ=255)
tttttCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGAt < 2:1747004/140‑1 (MQ=255)
ttttCAGGCTTAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATg < 1:1775197/140‑1 (MQ=255)
ttttCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATg < 1:138579/140‑1 (MQ=255)
ttttCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATg < 1:298895/140‑1 (MQ=255)
tttCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGc > 2:1736900/1‑140 (MQ=255)
tttCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGc > 1:626214/1‑140 (MQ=255)
ttCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCt < 1:107766/140‑1 (MQ=255)
ttCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCt < 2:23758/140‑1 (MQ=255)
aaGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAAAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCtca < 2:731214/139‑1 (MQ=255)
gCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCtcatca < 1:1736900/140‑1 (MQ=255)
gCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCtcatca < 1:965075/140‑1 (MQ=255)
aGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGgta > 1:307558/1‑140 (MQ=255)
gggTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGgtag < 2:237587/140‑1 (MQ=255)
ggTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGgtagt > 1:995046/1‑140 (MQ=255)
ggTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGgtagt > 1:931702/1‑140 (MQ=255)
accaccGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAgcg > 1:232956/1‑140 (MQ=255)
accGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCAt < 2:1423037/140‑1 (MQ=255)
ccGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATc > 2:1212715/1‑140 (MQ=255)
ccGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATc > 2:479341/1‑140 (MQ=255)
gCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCTCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAGCATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATccc < 1:639723/140‑1 (MQ=255)
gCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATccc < 1:1443948/140‑1 (MQ=255)
cgcACCGCAAATGAGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACggg > 1:1473382/1‑140 (MQ=255)
aGGATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACGGGAAACACGTTcgcg < 1:1415494/140‑1 (MQ=255)
gATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACGGGAAACACGTTcgcgcg < 2:416075/140‑1 (MQ=255)
gATAAAGCAAAGCCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACGGGAAACACGTTcgcgcg < 1:1212715/140‑1 (MQ=255)
agcaaagcCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACGGGAAACACGTTCGCGCGgccag > 2:1432359/1‑140 (MQ=255)
agcCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACGGGAAACACGTTCGCGCGGCCAGCCaaa > 2:666240/1‑140 (MQ=255)
agcCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACGGGAAACACGTTCGCGCGGCCAGCCaaa > 2:768824/1‑140 (MQ=255)
agcCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACGGGAAACACGTTCGCGCGGCCAGCCaaa > 2:1246770/1‑140 (MQ=255)
agcCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACGGGAAACACGTTCGCGCGGCCAGCCaaa > 2:809001/1‑140 (MQ=255)
agcCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACGGGAAACACGTTCGCGCGGCCAGCCaaa > 2:1657893/1‑140 (MQ=255)
gcCGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACGGGAAACACGTTCGCGCGGCCAGCCaaaa > 2:936955/1‑140 (MQ=255)
ccGTCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACGGGAAACACGTTCGCGCGGCCAGCCAAAAt > 2:458463/1‑140 (MQ=255)
tCCCCGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACGGGAAACACGTTCGCGCGGCCAGCCAAAATGAg < 1:1657893/140‑1 (MQ=255)
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TGTTCCACAGCATATGGTTGGTAATGTTGTCGCCGCTGCCCTCTTTGTTGAGATACAGCGGAATCCCGGCCTTTTTCAGGCTGAGGGTGACCACCGCCAGCGCACCGCAAATGAGGATAAAGCAAAGCCGTCCCAGCGAACCGGAGAATTCACGGTCGTCGAGGTTATCGAACATCATCAGCGCCATAATCAGCGGCACAATAAGCCCGATGCTCATCAGGTAGTAGCGCATCCCACGGGAAACACGTTCGCGCGGCCAGCCAAAATGAG > NC_000913/4387351‑4387620
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
