Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,472,141 |
C→A |
K85N (AAG→AAT) |
pyrB ← |
aspartate carbamoyltransferase catalytic subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,472,141 | 0 | C | A | 99.1%
| 354.0
/ ‑3.8
| 105 | K85N (AAG→AAT) | pyrB | aspartate carbamoyltransferase catalytic subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base A (36/68); total (36/69) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 |
Only 100 of 107 total aligned reads displayed.
CATCACCGGCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCCTTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGCTTCGAAGAAACAGCTGGCAATGACTTTGTGCTTCA > NC_000913/4472005‑4472277
|
cATCACCGGCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCAttt < 1:703915/140‑1 (MQ=255)
tCACCGGCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCAttttt > 1:297628/1‑140 (MQ=255)
cACCGGCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTa < 1:550229/140‑1 (MQ=255)
cACCGGCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTa < 2:1508966/140‑1 (MQ=255)
ccGGCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTAcc < 2:1779514/140‑1 (MQ=255)
ccGGCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTAcc < 2:729530/140‑1 (MQ=255)
ccGGCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTAcc < 2:222913/140‑1 (MQ=255)
ccGGCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTAcc < 2:1868737/140‑1 (MQ=255)
acGGCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTTTCGGCCAGCGTTTCGCCATTTTTAcc < 2:1844580/139‑1 (MQ=255)
cGGCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTAccc < 2:1332756/140‑1 (MQ=255)
ggCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCCTTTTTAc < 1:276877/137‑1 (MQ=255)
ggCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCa < 2:297628/140‑1 (MQ=255)
ggCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCa < 2:1628325/140‑1 (MQ=255)
ggCATTCAGGACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCCTTTTTAc > 2:276877/1‑137 (MQ=255)
cATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGt > 2:1997104/1‑140 (MQ=255)
aTTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTg < 2:1301369/140‑1 (MQ=255)
aTTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTg < 2:778603/140‑1 (MQ=255)
ttCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGa < 1:1779329/140‑1 (MQ=255)
aGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGt > 2:639862/1‑140 (MQ=255)
cGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTgg < 2:472390/140‑1 (MQ=255)
gTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGgcg > 1:163634/1‑140 (MQ=255)
gTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGgcg < 2:1180188/140‑1 (MQ=255)
gTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGgcg < 1:639862/140‑1 (MQ=255)
gTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGgcg > 2:1973096/1‑140 (MQ=255)
gTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGgcg > 2:858347/1‑140 (MQ=255)
tACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGgcgc < 1:1542024/140‑1 (MQ=255)
tACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGgcgc < 1:1449278/140‑1 (MQ=255)
ttGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTc > 1:1183279/1‑140 (MQ=255)
ttGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTc > 1:1851099/1‑140 (MQ=255)
ttGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTc > 1:1643724/1‑140 (MQ=255)
tGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCg > 1:1550446/1‑140 (MQ=255)
gCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCgg > 2:1110567/1‑140 (MQ=255)
ccGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGga > 1:493546/1‑140 (MQ=255)
ccGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGga > 1:473146/1‑140 (MQ=255)
ccGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGga > 1:342304/1‑140 (MQ=255)
cGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGgag < 1:287413/140‑1 (MQ=255)
ggAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGgaga > 1:870786/1‑140 (MQ=255)
gCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCt < 2:1851099/140‑1 (MQ=255)
ggCGCGCCGCACCTTCCTGCGGATGACGCATAACTATCGCATCGACGTAAGTACTGATAACCGAAATGGTGTCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGcc < 2:59459/140‑1 (MQ=255)
gcgcCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGccccc < 1:198100/140‑1 (MQ=255)
gccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAg < 1:1997104/140‑1 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg < 2:1048316/140‑1 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg < 2:2114174/140‑1 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg < 2:1643724/140‑1 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg < 2:239613/140‑1 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg < 1:338775/140‑1 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg < 2:1550446/140‑1 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg < 1:1033453/140‑1 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg > 1:1436831/1‑140 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg < 2:640205/140‑1 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg < 1:166329/140‑1 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg < 2:261654/140‑1 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg < 1:1973096/140‑1 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg < 2:473146/140‑1 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg > 1:261654/1‑140 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg > 1:321589/1‑140 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGACCCCCAgg < 2:1183279/140‑1 (MQ=255)
ccgcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGCTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAgg < 1:391005/140‑1 (MQ=255)
gcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCg < 2:2071115/140‑1 (MQ=255)
gcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCg < 2:493546/140‑1 (MQ=255)
gcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCg < 2:649811/140‑1 (MQ=255)
gcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCg < 1:1604225/140‑1 (MQ=255)
gcACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTAGCCCCCAGGCg < 2:1690050/140‑1 (MQ=255)
acACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCGCCACGCTGGCCCCCAGGCg < 2:571171/139‑1 (MQ=255)
aTGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGttt > 1:1202893/1‑140 (MQ=255)
gACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTca > 1:1184850/1‑139 (MQ=255)
gACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCg > 1:1772508/1‑140 (MQ=255)
gACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCg > 1:653846/1‑140 (MQ=255)
agCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGaa < 2:870786/139‑1 (MQ=255)
aCTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGTCCCCAGGCGGTGCATAGATGTTTCGAAagagag < 2:315222/140‑1 (MQ=255)
aCTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAagagag < 1:858347/140‑1 (MQ=255)
cTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAgg < 2:1436831/140‑1 (MQ=255)
cTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAgg < 2:1202893/140‑1 (MQ=255)
tCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGcgg > 1:1180846/1‑140 (MQ=255)
cGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGcggg > 2:2129340/1‑140 (MQ=255)
gCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGcgggt < 2:1132320/140‑1 (MQ=255)
cATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGcggagg > 2:1204338/1‑137 (MQ=255)
tCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGcgggtacg > 1:1198888/1‑140 (MQ=255)
tCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTACATAGATGTTTCGAAAGAGAGGcggttgtg > 1:982149/1‑135 (MQ=255)
aCGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGcgggtacgggt > 2:1175108/1‑140 (MQ=255)
aCGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGcgggtacgggt > 1:822111/1‑140 (MQ=255)
aCGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGcgggtacgggt > 1:2031603/1‑140 (MQ=255)
aCGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGcggggaagggg > 1:1858281/1‑139 (MQ=255)
gTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTag < 1:1606970/140‑1 (MQ=255)
tAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTaga < 2:2031603/140‑1 (MQ=255)
tAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGACGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTaga < 2:1614218/140‑1 (MQ=255)
gTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGc < 2:1180846/140‑1 (MQ=255)
cTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGCTTc < 1:735670/140‑1 (MQ=255)
ccGAAATGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGCTTCGAAGaaa < 1:1204338/140‑1 (MQ=255)
aaaTGGTATCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGCTTCGAAGAAACAg < 1:1101854/140‑1 (MQ=255)
aTCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGCTTCGAAGAAACAGCTGGCaa < 1:1872936/140‑1 (MQ=255)
aTCGGCCAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGCTTCGAAGAAACAGCTGGCaa < 1:1866888/140‑1 (MQ=255)
cAGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGCTTCGAAGAAACAGCTGGCAATGACtt < 1:1739303/140‑1 (MQ=255)
aGCGTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGCTTCGAAGAAACAGCTGGCAATGACttt < 2:822111/140‑1 (MQ=255)
gTTTCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGCTTCGAAGAAACAGCTGGCAATGACTTtgtg < 2:321589/140‑1 (MQ=255)
tttCGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGCTTCGAAGAAACAGCTGGCAATGACTTTGTGc < 2:696135/140‑1 (MQ=255)
cGCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGGGGAGGGGTCGGAGAAACAAATGGCAATGACTTTTTGCttt > 1:670262/1‑139 (MQ=255)
gCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGCTTCGAAGAAACAGCTGGCAATGACTTTGTGCTTCa < 2:258437/140‑1 (MQ=255)
gCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGCTTCGAAGAAACAGCTGGCAATGACTTTGTGCTTCa < 2:163634/140‑1 (MQ=255)
gCCATTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGCTTCGAAGAAACAGCTGGCAATGACTTTGTGCTTCa < 1:1175108/140‑1 (MQ=255)
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CATCACCGGCATTCAGTACCGGTACATTGCCGGAAAACTCGGTGGCCAGGCGCGCCGCACCTTCCTGCGGATGACGCATCACTATCGCATCGACGTAAGTGCTGATAACCGAAATGGTATCGGCCAGCGTTTCGCCCTTTTTACCCAGTGATGTATTGGCGCTGTCGGAGAAGCCCACCACGCTGGCCCCCAGGCGGTGCATAGATGTTTCGAAAGAGAGGCGGGTACGGGTAGAGGCTTCGAAGAAACAGCTGGCAATGACTTTGTGCTTCA > NC_000913/4472005‑4472277
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
