Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A12 F48 I1 R1 76 74.1 2532288 99.0% 2506965 139.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,173,948 G→T G483G (GGC→GGA)  parE ← DNA topoisomerase IV subunit B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,173,9480GT100.0% 315.1 / NA 87G483G (GGC→GGA) parEDNA topoisomerase IV subunit B
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (41/46);  total (41/46)

ATACGGTAGAGCGGTGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTGCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAGGTGTTAAGGATCTTACCTTTCA  >  NC_000913/3173811‑3174078
                                                                                                                                         |                                                                                                                                  
aTACGGTAGAGCGGTGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTcc                                                                                                                                  <  1:27596/140‑1 (MQ=255)
      tAGAGCGGTGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACg                                                                                                                            >  2:411105/1‑140 (MQ=255)
      tAGAGCGGTGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACg                                                                                                                            >  1:120431/1‑140 (MQ=255)
         agCGGTGGCAGTGCGATGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAg                                                                                                                         >  2:542849/1‑140 (MQ=255)
         agCGGTGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAg                                                                                                                         >  1:1055754/1‑140 (MQ=255)
         agCGGTGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAg                                                                                                                         <  1:39598/140‑1 (MQ=255)
         agCGGTGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAg                                                                                                                         <  1:433073/140‑1 (MQ=255)
         agCGGTGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAg                                                                                                                         <  1:623219/140‑1 (MQ=255)
         agCGGTGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAg                                                                                                                         >  1:752738/1‑140 (MQ=255)
         agCGGTGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAg                                                                                                                         >  1:859290/1‑140 (MQ=255)
           cGGTGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCt                                                                                                                       >  2:407882/1‑140 (MQ=255)
           cGGTGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCt                                                                                                                       >  1:618937/1‑140 (MQ=255)
              tGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAGAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGc                                                                                                                    >  2:21391/1‑140 (MQ=255)
              tGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTggt                                                                                                                    >  2:66698/1‑139 (MQ=255)
              tGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGc                                                                                                                    >  2:442709/1‑140 (MQ=255)
               ggCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCt                                                                                                                   <  2:409244/140‑1 (MQ=255)
                 cAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCa                                                                                                                 <  1:1141579/140‑1 (MQ=255)
                    tGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGAt                                                                                                              >  2:1010606/1‑140 (MQ=255)
                        aCGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGAtcgtc                                                                                                          >  2:862626/1‑140 (MQ=255)
                         cGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAGAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGAtcgtcg                                                                                                         <  1:21391/140‑1 (MQ=255)
                         cGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGAtcgtcg                                                                                                         <  1:1010606/140‑1 (MQ=255)
                         cGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGAtcgtcg                                                                                                         <  1:1103812/140‑1 (MQ=255)
                         cGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGAtcgtcg                                                                                                         <  1:66698/140‑1 (MQ=255)
                         cGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGAtcgtcg                                                                                                         <  1:442709/140‑1 (MQ=255)
                           tAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCt                                                                                                       <  2:891420/140‑1 (MQ=255)
                              aCGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTc                                                                                                    <  2:708592/140‑1 (MQ=255)
                              aCGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTc                                                                                                    <  2:963425/140‑1 (MQ=255)
                               cGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCa                                                                                                   <  1:862626/140‑1 (MQ=255)
                                gTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCTATAACGAAGCTGGCTCAGATCGTCGCTGTCAg                                                                                                  >  2:158112/1‑140 (MQ=255)
                                   aCCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGAt                                                                                               >  1:241130/1‑140 (MQ=255)
                                       tgtTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTc                                                                                                    >  1:483350/1‑131 (MQ=255)
                                       tgtTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTc                                                                                                    <  2:483350/131‑1 (MQ=255)
                                       ggtTTCACCAACGCGCGGAAAAGTTTTACGAACAAAACGCAGAGCAGCGTGGCAATGGGCAGACCATCAGAGTCCTCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGAt                                                                                           >  2:213891/2‑140 (MQ=255)
                                            cACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGa                                                                                      >  1:234744/1‑140 (MQ=255)
                                               cAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCg                                                                                   <  1:1072565/140‑1 (MQ=255)
                                                aaCGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGc                                                                                  <  1:542849/140‑1 (MQ=255)
                                                aaCGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGc                                                                                  <  1:407882/140‑1 (MQ=255)
                                                 aCGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGTAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCt                                                                                 >  2:600716/1‑140 (MQ=255)
                                                 aCGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCt                                                                                 >  1:927596/1‑140 (MQ=255)
                                                  cgcgcgGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTa                                                                                >  2:660491/1‑140 (MQ=255)
                                                  cgcgcgGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTa                                                                                >  1:730641/1‑140 (MQ=255)
                                                  cgcgcgGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTa                                                                                >  1:1089687/1‑140 (MQ=255)
                                                  cgcgcgGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGACAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTa                                                                                >  1:1234470/1‑140 (MQ=255)
                                                    cgcgGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTAcc                                                                              >  2:530209/1‑140 (MQ=255)
                                                     gcgGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCg                                                                             <  2:1062756/140‑1 (MQ=255)
                                                      cgGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGa                                                                            >  1:756325/1‑140 (MQ=255)
                                                       ggAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGaa                                                                           <  2:884962/140‑1 (MQ=255)
                                                          aaTGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAata                                                                        <  2:618937/140‑1 (MQ=255)
                                                          aaTGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAata                                                                        <  2:234744/140‑1 (MQ=255)
                                                             gTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCg                                                                     <  1:411105/140‑1 (MQ=255)
                                                                   cGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACt                                                               >  2:1224768/1‑140 (MQ=255)
                                                                        aaaGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTg                                                          >  2:976187/1‑140 (MQ=255)
                                                                         aaGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGc                                                         <  1:736879/140‑1 (MQ=255)
                                                                         aaGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGc                                                         <  1:1224768/140‑1 (MQ=255)
                                                                          aGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCg                                                        <  1:660491/140‑1 (MQ=255)
                                                                           gcgcAGAGCAGCGTGACAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGa                                                       <  2:1234470/140‑1 (MQ=255)
                                                                                    agcGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCAc                                              <  2:730641/140‑1 (MQ=255)
                                                                                    agcGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCAc                                              <  2:120431/140‑1 (MQ=255)
                                                                                      cGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACtt                                            >  2:316632/1‑140 (MQ=255)
                                                                                      cGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACtt                                            >  1:848158/1‑140 (MQ=255)
                                                                                        tGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTtcg                                          <  2:756325/140‑1 (MQ=255)
                                                                                         ggCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTtcgt                                         <  2:927596/140‑1 (MQ=255)
                                                                                                tgCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCACGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAaga                                  <  2:1055754/140‑1 (MQ=255)
                                                                                                tgCAGACCATCAGAGTCCGCATCAGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAaga                                  <  2:752738/140‑1 (MQ=255)
                                                                                                        aTCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTccc                          <  2:88862/140‑1 (MQ=255)
                                                                                                        aTCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTccc                          <  2:848158/140‑1 (MQ=255)
                                                                                                        aTCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTccc                          <  2:859290/140‑1 (MQ=255)
                                                                                                        aTCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTccc                          <  1:600716/140‑1 (MQ=255)
                                                                                                        aTCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTccc                          <  1:316632/140‑1 (MQ=255)
                                                                                                        aTCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATAGTCGCTGTAAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTccc                          <  2:469840/140‑1 (MQ=255)
                                                                                                         tCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCa                         <  1:213891/140‑1 (MQ=255)
                                                                                                         tCAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCa                         >  1:470926/1‑140 (MQ=255)
                                                                                                          cAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAg                        >  2:943485/1‑140 (MQ=255)
                                                                                                          cAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAg                        >  2:932313/1‑140 (MQ=255)
                                                                                                          cAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAg                        >  1:1255669/1‑140 (MQ=255)
                                                                                                          cAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAg                        >  1:11809/1‑140 (MQ=255)
                                                                                                          cAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAg                        <  1:976187/140‑1 (MQ=255)
                                                                                                          cAGAGTCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAg                        >  1:266038/1‑140 (MQ=255)
                                                                                                               tCCGCATCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAGGTGtt                   >  2:244330/1‑140 (MQ=255)
                                                                                                                    aTCCGCGAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAGGTGTTAAGGa              >  1:181304/1‑140 (MQ=255)
                                                                                                                         cgAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAGGTGTTAAGGATCTTa         >  2:778038/1‑140 (MQ=255)
                                                                                                                         cgAGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAGGTGTTAAGGATCTTa         >  2:727124/1‑140 (MQ=255)
                                                                                                                           aGGATACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGACACTTCCCAGGTGTTAAGGATCTTAcc       >  2:184041/1‑140 (MQ=255)
                                                                                                                              aTACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAGGTGTTAAGGATCTTACCttt    <  2:266038/140‑1 (MQ=255)
                                                                                                                              aTACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAGGTGTTAAGGATCTTACCttt    <  2:937233/140‑1 (MQ=255)
                                                                                                                               tACAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAGGTGTTAAGGATCTTACCTTTc   <  1:932313/140‑1 (MQ=255)
                                                                                                                                aCAGATTTTTCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAGGTGTTAAGGATCTTACCTTTCa  <  1:943485/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                  
ATACGGTAGAGCGGTGGCAGTGCGACGTAAACGTGACCGTGTTTCACCAACGCGCGGAAATGTTTTACGAACAAAGCGCAGAGCAGCGTGGCAATGTGCAGACCATCAGAGTCCGCATCCGCGAGGATACAGATTTTGCCATAACGAAGCTGGCTCAGATCGTCGCTGTCAGGATCGATACCGATCGCTACCGAAATATCGTGCACTTCCTGCGAAGCCAGCACTTCGTCGGAAGAGACTTCCCAGGTGTTAAGGATCTTACCTTTCA  >  NC_000913/3173811‑3174078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A